RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 HSPA5P11021 654 aaKnown RBP4.21□□□□□ -1.74
KNL1-202ENST00000399668 HNRNPMP52272 730 aaKnown RBP eCLIP4.21□□□□□ -1.74
KNL1-202ENST00000399668 FHOD3Q2V2M9 1422 aa4.21□□□□□ -1.74
KNL1-202ENST00000399668 FMN1Q68DA7 1419 aa4.21□□□□□ -1.74
KNL1-202ENST00000399668 KANK1Q14678 1352 aa4.21□□□□□ -1.74
KNL1-202ENST00000399668 RTN4Q9NQC3 1192 aaKnown RBP4.21□□□□□ -1.74
KNL1-202ENST00000399668 PDS5BQ9NTI5 1447 aa4.21□□□□□ -1.74
KNL1-202ENST00000399668 SPRYD3Q8NCJ5 442 aa4.2□□□□□ -1.74
KNL1-202ENST00000399668 SUPT6HQ7KZ85 1726 aaKnown RBP4.2□□□□□ -1.74
KNL1-202ENST00000399668 CASC1Q6TDU7 716 aa4.2□□□□□ -1.74
KNL1-202ENST00000399668 NUDCQ9Y266 331 aa4.2□□□□□ -1.74
KNL1-202ENST00000399668 NUP155O75694 1391 aa4.2□□□□□ -1.74
KNL1-202ENST00000399668 TULP1O00294 542 aaPredicted RBP4.19□□□□□ -1.74
KNL1-202ENST00000399668 CARMIL2Q6F5E8 1435 aa4.19□□□□□ -1.74
KNL1-202ENST00000399668 HSP90AB1P08238 724 aaKnown RBP4.19□□□□□ -1.74
KNL1-202ENST00000399668 PAK3O75914 559 aaPredicted RBP4.19□□□□□ -1.74
KNL1-202ENST00000399668 MORC1Q86VD1 984 aa4.19□□□□□ -1.74
KNL1-202ENST00000399668 NOP58Q9Y2X3 529 aaKnown RBP4.19□□□□□ -1.74
KNL1-202ENST00000399668 CCDC18Q5T9S5 1454 aa4.19□□□□□ -1.74
KNL1-202ENST00000399668 ATAD2BQ9ULI0 1458 aa4.19□□□□□ -1.74
KNL1-202ENST00000399668 NUTM2DQ5VT03 806 aaPredicted RBP4.19□□□□□ -1.74
KNL1-202ENST00000399668 GOLGA6L22H0YM25 854 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 ANP32EQ9BTT0 268 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 CTTNBP2Q8WZ74 1663 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 OS9Q13438 667 aaPredicted RBP4.18□□□□□ -1.74
KNL1-202ENST00000399668 FANCD2Q9BXW9 1451 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 NPHP1O15259 732 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 PNNQ9H307 717 aaKnown RBP4.18□□□□□ -1.74
KNL1-202ENST00000399668 NAP1L2Q9ULW6 460 aaPredicted RBP4.18□□□□□ -1.74
KNL1-202ENST00000399668 SYNJ1O43426 1573 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 TCHHQ07283 1943 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 DNTTIP2Q5QJE6 756 aaKnown RBP4.18□□□□□ -1.74
KNL1-202ENST00000399668 APBB1O00213 710 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 RBM19Q9Y4C8 960 aaKnown RBP4.18□□□□□ -1.74
KNL1-202ENST00000399668 MYH10P35580 1976 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 TSPOAP1O95153 1857 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 KCNJ4P48050 445 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 PLCB2Q00722 1185 aa4.18□□□□□ -1.74
KNL1-202ENST00000399668 KIF21BO75037 1637 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 L3MBTL2Q969R5 705 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 RCAN3Q9UKA8 241 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 KTN1Q86UP2 1357 aaKnown RBP4.17□□□□□ -1.74
KNL1-202ENST00000399668 CCDC146Q8IYE0 955 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 NUTM2FA1L443 756 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 JPH4Q96JJ6 628 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 CC2D2AQ9P2K1 1620 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 KIF3BO15066 747 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
KNL1-202ENST00000399668 FGD1P98174 961 aa4.17□□□□□ -1.74
KNL1-202ENST00000399668 CCER2I3L3R5 266 aa4.16□□□□□ -1.74
KNL1-202ENST00000399668 U2AF1L5P0DN76 240 aaPredicted RBP4.16□□□□□ -1.74
KNL1-202ENST00000399668 U2AF1Q01081 240 aaKnown RBP eCLIP4.16□□□□□ -1.74
KNL1-202ENST00000399668 GLIPR1L2Q4G1C9 344 aa4.16□□□□□ -1.74
KNL1-202ENST00000399668 RTF1Q92541 710 aaKnown RBP4.16□□□□□ -1.74
KNL1-202ENST00000399668 FGD5Q6ZNL6 1462 aa4.16□□□□□ -1.74
KNL1-202ENST00000399668 ANKRD30AQ9BXX3 1397 aa4.16□□□□□ -1.74
KNL1-202ENST00000399668 ZRSR1Q15695 479 aaKnown RBP4.16□□□□□ -1.74
KNL1-202ENST00000399668 NUMA1Q14980 2115 aa4.16□□□□□ -1.74
KNL1-202ENST00000399668 GAPVD1Q14C86 1478 aa4.16□□□□□ -1.74
KNL1-202ENST00000399668 CADPSQ9ULU8 1353 aa4.15□□□□□ -1.74
KNL1-202ENST00000399668 GOLGA2Q08379 1002 aa4.15□□□□□ -1.75
KNL1-202ENST00000399668 TIMELESSQ9UNS1 1208 aa4.15□□□□□ -1.75
KNL1-202ENST00000399668 TRAK1Q9UPV9 953 aa4.15□□□□□ -1.75
KNL1-202ENST00000399668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.15□□□□□ -1.75
KNL1-202ENST00000399668 RAD54L2Q9Y4B4 1467 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 ST20-MTHFSA0A0A6YYL1 179 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 GZF1Q9H116 711 aaPredicted RBP4.14□□□□□ -1.75
KNL1-202ENST00000399668 MS4A1P11836 297 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 EFCAB2Q5VUJ9 269 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 WASHC2CQ9Y4E1 1318 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 HDGFP51858 240 aaKnown RBP4.14□□□□□ -1.75
KNL1-202ENST00000399668 SPAG9O60271 1321 aaKnown RBP4.14□□□□□ -1.75
KNL1-202ENST00000399668 CDK11BP21127 795 aaKnown RBP4.14□□□□□ -1.75
KNL1-202ENST00000399668 HDGFL2Q7Z4V5 671 aaPredicted RBP4.14□□□□□ -1.75
KNL1-202ENST00000399668 HSCBQ8IWL3 235 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 TOP2BQ02880 1626 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 ITPRIPQ8IWB1 547 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 CLUAP1Q96AJ1 413 aa4.14□□□□□ -1.75
KNL1-202ENST00000399668 NAP1L5Q96NT1 182 aaPredicted RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 RALBP1Q15311 655 aa4.13□□□□□ -1.75
KNL1-202ENST00000399668 SLKQ9H2G2 1235 aaPredicted RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 RRP7AQ9Y3A4 280 aaKnown RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 PLIN1O60240 522 aa4.13□□□□□ -1.75
KNL1-202ENST00000399668 DEKP35659 375 aaKnown RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 ZNF330Q9Y3S2 320 aaPredicted RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 DHX57Q6P158 1386 aaKnown RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 CHMP4BQ9H444 224 aaKnown RBP4.13□□□□□ -1.75
KNL1-202ENST00000399668 SMC4Q9NTJ3 1288 aa4.13□□□□□ -1.75
KNL1-202ENST00000399668 PANK3Q9H999 370 aa4.13□□□□□ -1.75
KNL1-202ENST00000399668 BAZ2BQ9UIF8 2168 aaKnown RBP4.12□□□□□ -1.75
KNL1-202ENST00000399668 CUX1P39880 1505 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 SLC4A10Q6U841 1118 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 LTV1Q96GA3 475 aaPredicted RBP4.12□□□□□ -1.75
KNL1-202ENST00000399668 BCL2L13Q9BXK5 485 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 CCDC144AA2RUR9 1427 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 ANKRD12Q6UB98 2062 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 WDR97A6NE52 1622 aa4.12□□□□□ -1.75
KNL1-202ENST00000399668 IPO8O15397 1037 aaKnown RBP4.12□□□□□ -1.75
KNL1-202ENST00000399668 TRIM6-TRIM34B2RNG4 842 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms