RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
TRIM39-203ENST00000396547 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
TRIM39-203ENST00000396547 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.23
TRIM39-203ENST00000396547 FAM9BQ8IZU0 186 aa13.63□□□□□ -0.23
TRIM39-203ENST00000396547 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
TRIM39-203ENST00000396547 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
TRIM39-203ENST00000396547 EPRSP07814 1512 aaKnown RBP13.61□□□□□ -0.23
TRIM39-203ENST00000396547 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
TRIM39-203ENST00000396547 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
TRIM39-203ENST00000396547 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
TRIM39-203ENST00000396547 PHLDB1Q86UU1 1377 aa13.61□□□□□ -0.23
TRIM39-203ENST00000396547 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
TRIM39-203ENST00000396547 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
TRIM39-203ENST00000396547 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
TRIM39-203ENST00000396547 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
TRIM39-203ENST00000396547 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
TRIM39-203ENST00000396547 ATP10BO94823 1461 aa13.58□□□□□ -0.24
TRIM39-203ENST00000396547 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
TRIM39-203ENST00000396547 CCDC184Q52MB2 194 aa13.57□□□□□ -0.24
TRIM39-203ENST00000396547 LRRIQ1Q96JM4 1722 aa13.57□□□□□ -0.24
TRIM39-203ENST00000396547 ARAP3Q8WWN8 1544 aa13.56□□□□□ -0.24
TRIM39-203ENST00000396547 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
TRIM39-203ENST00000396547 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
TRIM39-203ENST00000396547 FYCO1Q9BQS8 1478 aa13.53□□□□□ -0.24
TRIM39-203ENST00000396547 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM39-203ENST00000396547 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
TRIM39-203ENST00000396547 CCDC18Q5T9S5 1454 aa13.52□□□□□ -0.24
TRIM39-203ENST00000396547 FHOD3Q2V2M9 1422 aa13.52□□□□□ -0.25
TRIM39-203ENST00000396547 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
TRIM39-203ENST00000396547 CFAP74Q9C0B2 1584 aa13.51□□□□□ -0.25
TRIM39-203ENST00000396547 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
TRIM39-203ENST00000396547 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
TRIM39-203ENST00000396547 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
TRIM39-203ENST00000396547 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
TRIM39-203ENST00000396547 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
TRIM39-203ENST00000396547 PCF11O94913 1555 aaKnown RBP13.49□□□□□ -0.25
TRIM39-203ENST00000396547 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
TRIM39-203ENST00000396547 RRP7BPQ9NSQ0 103 aa13.48□□□□□ -0.25
TRIM39-203ENST00000396547 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
TRIM39-203ENST00000396547 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
TRIM39-203ENST00000396547 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
TRIM39-203ENST00000396547 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
TRIM39-203ENST00000396547 NEO1Q92859 1461 aa13.45□□□□□ -0.26
TRIM39-203ENST00000396547 FOXD1Q16676 465 aa13.44□□□□□ -0.26
TRIM39-203ENST00000396547 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
TRIM39-203ENST00000396547 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
TRIM39-203ENST00000396547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIM39-203ENST00000396547 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRIM39-203ENST00000396547 KDM6BO15054 1643 aa13.42□□□□□ -0.26
TRIM39-203ENST00000396547 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-203ENST00000396547 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
TRIM39-203ENST00000396547 ARID3CA6NKF2 412 aa13.41□□□□□ -0.26
TRIM39-203ENST00000396547 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
TRIM39-203ENST00000396547 KIF14Q15058 1648 aa13.41□□□□□ -0.26
TRIM39-203ENST00000396547 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
TRIM39-203ENST00000396547 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
TRIM39-203ENST00000396547 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
TRIM39-203ENST00000396547 TTC37Q6PGP7 1564 aa13.39□□□□□ -0.27
TRIM39-203ENST00000396547 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
TRIM39-203ENST00000396547 PREX2Q70Z35 1606 aa13.39□□□□□ -0.27
TRIM39-203ENST00000396547 ZMYM4Q5VZL5 1548 aa13.39□□□□□ -0.27
TRIM39-203ENST00000396547 ANP32AP39687 249 aaKnown RBP13.38□□□□□ -0.27
TRIM39-203ENST00000396547 FAM69CQ0P6D2 419 aa13.38□□□□□ -0.27
TRIM39-203ENST00000396547 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
TRIM39-203ENST00000396547 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
TRIM39-203ENST00000396547 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
TRIM39-203ENST00000396547 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
TRIM39-203ENST00000396547 CD109Q6YHK3 1445 aa13.37□□□□□ -0.27
TRIM39-203ENST00000396547 RICTORQ6R327 1708 aa13.37□□□□□ -0.27
TRIM39-203ENST00000396547 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
TRIM39-203ENST00000396547 FRMPD1Q5SYB0 1578 aa13.36□□□□□ -0.27
TRIM39-203ENST00000396547 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-203ENST00000396547 ZNF326Q5BKZ1 582 aaKnown RBP13.36□□□□□ -0.27
TRIM39-203ENST00000396547 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
TRIM39-203ENST00000396547 L3MBTL2Q969R5 705 aa13.35□□□□□ -0.27
TRIM39-203ENST00000396547 SALL2Q9Y467 1007 aaPredicted RBP13.35□□□□□ -0.27
TRIM39-203ENST00000396547 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
TRIM39-203ENST00000396547 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
TRIM39-203ENST00000396547 PLCH2O75038 1416 aa13.34□□□□□ -0.27
TRIM39-203ENST00000396547 CDC42BPAQ5VT25 1732 aa13.34□□□□□ -0.27
TRIM39-203ENST00000396547 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.28
TRIM39-203ENST00000396547 PTPRKQ15262 1439 aa13.33□□□□□ -0.28
TRIM39-203ENST00000396547 AKNAQ7Z591 1439 aa13.32□□□□□ -0.28
TRIM39-203ENST00000396547 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
TRIM39-203ENST00000396547 ITSN2Q9NZM3 1697 aa13.31□□□□□ -0.28
TRIM39-203ENST00000396547 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
TRIM39-203ENST00000396547 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
TRIM39-203ENST00000396547 KDM5CP41229 1560 aa13.3□□□□□ -0.28
TRIM39-203ENST00000396547 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
TRIM39-203ENST00000396547 MAGI2Q86UL8 1455 aa13.29□□□□□ -0.28
TRIM39-203ENST00000396547 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
TRIM39-203ENST00000396547 FGD6Q6ZV73 1430 aa13.29□□□□□ -0.28
TRIM39-203ENST00000396547 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
TRIM39-203ENST00000396547 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
TRIM39-203ENST00000396547 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
TRIM39-203ENST00000396547 ARHGEF40Q8TER5 1519 aa13.27□□□□□ -0.29
TRIM39-203ENST00000396547 CNTLNQ9NXG0 1405 aa13.26□□□□□ -0.29
TRIM39-203ENST00000396547 ABCC1P33527 1531 aa13.26□□□□□ -0.29
TRIM39-203ENST00000396547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRIM39-203ENST00000396547 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms