RNA–Protein interactions for RNA: ENST00000396052.3

LYRM1-202, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 1,659 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-202ENST00000396052 PREX1Q8TCU6 1659 aa20.54■□□□□ 0.88
LYRM1-202ENST00000396052 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
LYRM1-202ENST00000396052 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
LYRM1-202ENST00000396052 ARHGEF12Q9NZN5 1544 aa20.54■□□□□ 0.88
LYRM1-202ENST00000396052 SCAPERQ9BY12 1400 aa20.51■□□□□ 0.87
LYRM1-202ENST00000396052 ATP10AO60312 1499 aa20.51■□□□□ 0.87
LYRM1-202ENST00000396052 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
LYRM1-202ENST00000396052 PLCH2O75038 1416 aa20.49■□□□□ 0.87
LYRM1-202ENST00000396052 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
LYRM1-202ENST00000396052 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
LYRM1-202ENST00000396052 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
LYRM1-202ENST00000396052 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
LYRM1-202ENST00000396052 SPATA31D1Q6ZQQ2 1576 aa20.43■□□□□ 0.86
LYRM1-202ENST00000396052 CDK13Q14004 1512 aaKnown RBP20.41■□□□□ 0.86
LYRM1-202ENST00000396052 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
LYRM1-202ENST00000396052 PTPRTO14522 1441 aa20.4■□□□□ 0.86
LYRM1-202ENST00000396052 SETD1BQ9UPS6 1966 aaKnown RBP20.36■□□□□ 0.85
LYRM1-202ENST00000396052 ZNF518AQ6AHZ1 1483 aa20.36■□□□□ 0.85
LYRM1-202ENST00000396052 MYO5CQ9NQX4 1742 aa20.35■□□□□ 0.85
LYRM1-202ENST00000396052 EEA1Q15075 1411 aa20.34■□□□□ 0.85
LYRM1-202ENST00000396052 IQSEC2Q5JU85 1478 aa20.34■□□□□ 0.85
LYRM1-202ENST00000396052 LTBP4Q8N2S1 1624 aa20.34■□□□□ 0.85
LYRM1-202ENST00000396052 KDM5CP41229 1560 aa20.33■□□□□ 0.85
LYRM1-202ENST00000396052 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
LYRM1-202ENST00000396052 REREQ9P2R6 1566 aa20.32■□□□□ 0.84
LYRM1-202ENST00000396052 C3P01024 1663 aa20.31■□□□□ 0.84
LYRM1-202ENST00000396052 DIP2CQ9Y2E4 1556 aa20.3■□□□□ 0.84
LYRM1-202ENST00000396052 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
LYRM1-202ENST00000396052 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
LYRM1-202ENST00000396052 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
LYRM1-202ENST00000396052 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
LYRM1-202ENST00000396052 KIF14Q15058 1648 aa20.26■□□□□ 0.83
LYRM1-202ENST00000396052 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
LYRM1-202ENST00000396052 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
LYRM1-202ENST00000396052 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
LYRM1-202ENST00000396052 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
LYRM1-202ENST00000396052 AGLP35573 1532 aa20.25■□□□□ 0.83
LYRM1-202ENST00000396052 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
LYRM1-202ENST00000396052 FMN1Q68DA7 1419 aa20.23■□□□□ 0.83
LYRM1-202ENST00000396052 TROQ12816 1431 aaPredicted RBP20.23■□□□□ 0.83
LYRM1-202ENST00000396052 CNTLNQ9NXG0 1405 aa20.2■□□□□ 0.82
LYRM1-202ENST00000396052 CLIP1P30622 1438 aa20.19■□□□□ 0.82
LYRM1-202ENST00000396052 CDC42BPBQ9Y5S2 1711 aa20.17■□□□□ 0.82
LYRM1-202ENST00000396052 CAMSAP1Q5T5Y3 1602 aa20.17■□□□□ 0.82
LYRM1-202ENST00000396052 NPATQ14207 1427 aa20.15■□□□□ 0.82
LYRM1-202ENST00000396052 ABCC1P33527 1531 aa20.14■□□□□ 0.82
LYRM1-202ENST00000396052 ARHGAP35Q9NRY4 1499 aa20.14■□□□□ 0.81
LYRM1-202ENST00000396052 UBAP1LF5GYI3 381 aa20.13■□□□□ 0.81
LYRM1-202ENST00000396052 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
LYRM1-202ENST00000396052 ZNF335Q9H4Z2 1342 aaPredicted RBP20.12■□□□□ 0.81
LYRM1-202ENST00000396052 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
LYRM1-202ENST00000396052 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
LYRM1-202ENST00000396052 PREX2Q70Z35 1606 aa20.12■□□□□ 0.81
LYRM1-202ENST00000396052 NCKAP5LQ9HCH0 1330 aa20.11■□□□□ 0.81
LYRM1-202ENST00000396052 ZMYM3Q14202 1370 aa20.1■□□□□ 0.81
LYRM1-202ENST00000396052 LRRIQ1Q96JM4 1722 aa20.09■□□□□ 0.81
LYRM1-202ENST00000396052 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
LYRM1-202ENST00000396052 PLA2R1Q13018 1463 aa20.08■□□□□ 0.8
LYRM1-202ENST00000396052 PKD2Q13563 968 aa20.07■□□□□ 0.8
LYRM1-202ENST00000396052 ZNF142P52746 1687 aaPredicted RBP20.04■□□□□ 0.8
LYRM1-202ENST00000396052 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
LYRM1-202ENST00000396052 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
LYRM1-202ENST00000396052 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.8
LYRM1-202ENST00000396052 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
LYRM1-202ENST00000396052 CEP170BQ9Y4F5 1589 aaPredicted RBP20.01■□□□□ 0.79
LYRM1-202ENST00000396052 CDC42BPAQ5VT25 1732 aa20■□□□□ 0.79
LYRM1-202ENST00000396052 PTPRKQ15262 1439 aa20■□□□□ 0.79
LYRM1-202ENST00000396052 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
LYRM1-202ENST00000396052 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
LYRM1-202ENST00000396052 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
LYRM1-202ENST00000396052 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
LYRM1-202ENST00000396052 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
LYRM1-202ENST00000396052 MED1Q15648 1581 aaPredicted RBP19.97■□□□□ 0.79
LYRM1-202ENST00000396052 HSPA1LP34931 641 aa19.96■□□□□ 0.79
LYRM1-202ENST00000396052 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
LYRM1-202ENST00000396052 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
LYRM1-202ENST00000396052 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
LYRM1-202ENST00000396052 SYCP2Q9BX26 1530 aa19.95■□□□□ 0.78
LYRM1-202ENST00000396052 ATP7AQ04656 1500 aa19.94■□□□□ 0.78
LYRM1-202ENST00000396052 A2MP01023 1474 aa19.94■□□□□ 0.78
LYRM1-202ENST00000396052 HNRNPMP52272 730 aaKnown RBP eCLIP19.94■□□□□ 0.78
LYRM1-202ENST00000396052 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
LYRM1-202ENST00000396052 TOM1O60784 492 aa19.92■□□□□ 0.78
LYRM1-202ENST00000396052 GGT6Q6P531 493 aa19.92■□□□□ 0.78
LYRM1-202ENST00000396052 GPATCH8Q9UKJ3 1502 aaKnown RBP19.91■□□□□ 0.78
LYRM1-202ENST00000396052 PIP4K2BP78356 416 aa19.91■□□□□ 0.78
LYRM1-202ENST00000396052 INO80Q9ULG1 1556 aaPredicted RBP19.91■□□□□ 0.78
LYRM1-202ENST00000396052 KIAA1107Q9UPP5 1409 aa19.91■□□□□ 0.78
LYRM1-202ENST00000396052 A2ML1A8K2U0 1454 aa19.9■□□□□ 0.78
LYRM1-202ENST00000396052 CPS1P31327 1500 aa19.9■□□□□ 0.78
LYRM1-202ENST00000396052 DNMT1P26358 1616 aaKnown RBP19.89■□□□□ 0.78
LYRM1-202ENST00000396052 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
LYRM1-202ENST00000396052 SHANK2Q9UPX8 1470 aa19.86■□□□□ 0.77
LYRM1-202ENST00000396052 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
LYRM1-202ENST00000396052 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
LYRM1-202ENST00000396052 NEURL4Q96JN8 1562 aa19.84■□□□□ 0.77
LYRM1-202ENST00000396052 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.77
LYRM1-202ENST00000396052 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.76
LYRM1-202ENST00000396052 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
LYRM1-202ENST00000396052 TNRQ92752 1358 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms