RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 RAPGEF3O95398 923 aa11.97□□□□□ -0.49
RAB5CP1-201ENST00000395972 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
RAB5CP1-201ENST00000395972 CAPN15O75808 1086 aa11.96□□□□□ -0.49
RAB5CP1-201ENST00000395972 PROM2Q8N271 834 aa11.96□□□□□ -0.49
RAB5CP1-201ENST00000395972 WDR7Q9Y4E6 1490 aa11.95□□□□□ -0.5
RAB5CP1-201ENST00000395972 MED1Q15648 1581 aaPredicted RBP11.95□□□□□ -0.5
RAB5CP1-201ENST00000395972 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
RAB5CP1-201ENST00000395972 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
RAB5CP1-201ENST00000395972 ARAP3Q8WWN8 1544 aa11.92□□□□□ -0.5
RAB5CP1-201ENST00000395972 ZCCHC11Q5TAX3 1644 aaKnown RBP11.92□□□□□ -0.5
RAB5CP1-201ENST00000395972 MLECQ14165 292 aa11.91□□□□□ -0.5
RAB5CP1-201ENST00000395972 HSPA1LP34931 641 aa11.9□□□□□ -0.5
RAB5CP1-201ENST00000395972 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
RAB5CP1-201ENST00000395972 LTBP4Q8N2S1 1624 aa11.88□□□□□ -0.51
RAB5CP1-201ENST00000395972 CFAP43Q8NDM7 1665 aa11.87□□□□□ -0.51
RAB5CP1-201ENST00000395972 PTPRTO14522 1441 aa11.86□□□□□ -0.51
RAB5CP1-201ENST00000395972 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
RAB5CP1-201ENST00000395972 CEBPAP49715 358 aaPredicted RBP11.85□□□□□ -0.51
RAB5CP1-201ENST00000395972 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
RAB5CP1-201ENST00000395972 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
RAB5CP1-201ENST00000395972 DSG3P32926 999 aa11.84□□□□□ -0.51
RAB5CP1-201ENST00000395972 PIP4K2BP78356 416 aa11.84□□□□□ -0.51
RAB5CP1-201ENST00000395972 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
RAB5CP1-201ENST00000395972 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
RAB5CP1-201ENST00000395972 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
RAB5CP1-201ENST00000395972 PKD2Q13563 968 aa11.81□□□□□ -0.52
RAB5CP1-201ENST00000395972 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
RAB5CP1-201ENST00000395972 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
RAB5CP1-201ENST00000395972 FANCAO15360 1455 aa11.78□□□□□ -0.52
RAB5CP1-201ENST00000395972 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
RAB5CP1-201ENST00000395972 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
RAB5CP1-201ENST00000395972 ZNF335Q9H4Z2 1342 aaPredicted RBP11.77□□□□□ -0.53
RAB5CP1-201ENST00000395972 IGF1RP08069 1367 aa11.77□□□□□ -0.53
RAB5CP1-201ENST00000395972 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
RAB5CP1-201ENST00000395972 ARID3CA6NKF2 412 aa11.75□□□□□ -0.53
RAB5CP1-201ENST00000395972 AKNAQ7Z591 1439 aa11.75□□□□□ -0.53
RAB5CP1-201ENST00000395972 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
RAB5CP1-201ENST00000395972 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
RAB5CP1-201ENST00000395972 TTC37Q6PGP7 1564 aa11.74□□□□□ -0.53
RAB5CP1-201ENST00000395972 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
RAB5CP1-201ENST00000395972 FRMPD1Q5SYB0 1578 aa11.73□□□□□ -0.53
RAB5CP1-201ENST00000395972 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
RAB5CP1-201ENST00000395972 NEO1Q92859 1461 aa11.71□□□□□ -0.53
RAB5CP1-201ENST00000395972 TOM1O60784 492 aa11.71□□□□□ -0.53
RAB5CP1-201ENST00000395972 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
RAB5CP1-201ENST00000395972 FER1L4A9Z1Z3 1794 aa11.7□□□□□ -0.54
RAB5CP1-201ENST00000395972 ABCB7O75027 752 aa11.68□□□□□ -0.54
RAB5CP1-201ENST00000395972 DENND4BO75064 1496 aaPredicted RBP11.68□□□□□ -0.54
RAB5CP1-201ENST00000395972 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
RAB5CP1-201ENST00000395972 NCKAP5LQ9HCH0 1330 aa11.67□□□□□ -0.54
RAB5CP1-201ENST00000395972 NCOA1Q15788 1441 aa11.67□□□□□ -0.54
RAB5CP1-201ENST00000395972 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.54
RAB5CP1-201ENST00000395972 SIGLEC1Q9BZZ2 1709 aa11.65□□□□□ -0.54
RAB5CP1-201ENST00000395972 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.55
RAB5CP1-201ENST00000395972 POTEAQ6S8J7 498 aa11.64□□□□□ -0.55
RAB5CP1-201ENST00000395972 KIAA0556O60303 1618 aa11.64□□□□□ -0.55
RAB5CP1-201ENST00000395972 KIF27Q86VH2 1401 aa11.63□□□□□ -0.55
RAB5CP1-201ENST00000395972 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
RAB5CP1-201ENST00000395972 ARHGEF12Q9NZN5 1544 aa11.63□□□□□ -0.55
RAB5CP1-201ENST00000395972 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
RAB5CP1-201ENST00000395972 FHOD3Q2V2M9 1422 aa11.61□□□□□ -0.55
RAB5CP1-201ENST00000395972 UGGT2Q9NYU1 1516 aa11.61□□□□□ -0.55
RAB5CP1-201ENST00000395972 ABCA9Q8IUA7 1624 aa11.61□□□□□ -0.55
RAB5CP1-201ENST00000395972 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
RAB5CP1-201ENST00000395972 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
RAB5CP1-201ENST00000395972 ABCA8O94911 1581 aa11.58□□□□□ -0.55
RAB5CP1-201ENST00000395972 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
RAB5CP1-201ENST00000395972 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
RAB5CP1-201ENST00000395972 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
RAB5CP1-201ENST00000395972 RICTORQ6R327 1708 aa11.56□□□□□ -0.56
RAB5CP1-201ENST00000395972 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
RAB5CP1-201ENST00000395972 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.56
RAB5CP1-201ENST00000395972 TRAPPC8Q9Y2L5 1435 aa11.56□□□□□ -0.56
RAB5CP1-201ENST00000395972 MAGI2Q86UL8 1455 aa11.56□□□□□ -0.56
RAB5CP1-201ENST00000395972 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
RAB5CP1-201ENST00000395972 ATP10BO94823 1461 aa11.55□□□□□ -0.56
RAB5CP1-201ENST00000395972 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
RAB5CP1-201ENST00000395972 POTEHQ6S545 545 aa11.54□□□□□ -0.56
RAB5CP1-201ENST00000395972 FAM9AQ8IZU1 332 aaPredicted RBP11.54□□□□□ -0.56
RAB5CP1-201ENST00000395972 ATP10AO60312 1499 aa11.54□□□□□ -0.56
RAB5CP1-201ENST00000395972 C9orf84Q5VXU9 1444 aa11.53□□□□□ -0.56
RAB5CP1-201ENST00000395972 HECW1Q76N89 1606 aa11.52□□□□□ -0.57
RAB5CP1-201ENST00000395972 SETD1BQ9UPS6 1966 aaKnown RBP11.52□□□□□ -0.57
RAB5CP1-201ENST00000395972 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
RAB5CP1-201ENST00000395972 PTPRKQ15262 1439 aa11.52□□□□□ -0.57
RAB5CP1-201ENST00000395972 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
RAB5CP1-201ENST00000395972 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
RAB5CP1-201ENST00000395972 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
RAB5CP1-201ENST00000395972 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
RAB5CP1-201ENST00000395972 GOLGA3Q08378 1498 aa11.48□□□□□ -0.57
RAB5CP1-201ENST00000395972 C3P01024 1663 aa11.47□□□□□ -0.57
RAB5CP1-201ENST00000395972 CPS1P31327 1500 aa11.46□□□□□ -0.57
RAB5CP1-201ENST00000395972 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.57
RAB5CP1-201ENST00000395972 POLA2Q14181 598 aa11.46□□□□□ -0.57
RAB5CP1-201ENST00000395972 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
RAB5CP1-201ENST00000395972 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
RAB5CP1-201ENST00000395972 NBR1Q14596 966 aa11.44□□□□□ -0.58
RAB5CP1-201ENST00000395972 SHANK2Q9UPX8 1470 aa11.44□□□□□ -0.58
RAB5CP1-201ENST00000395972 PLA2R1Q13018 1463 aa11.43□□□□□ -0.58
RAB5CP1-201ENST00000395972 ALKQ9UM73 1620 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms