RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 HECW1Q76N89 1606 aa24.01■■□□□ 1.43
PFDN6-204ENST00000395131 PRXQ9BXM0 1461 aa24■■□□□ 1.43
PFDN6-204ENST00000395131 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
PFDN6-204ENST00000395131 UHRF1BP1Q6BDS2 1440 aa23.99■■□□□ 1.43
PFDN6-204ENST00000395131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
PFDN6-204ENST00000395131 CEBPAP49715 358 aaPredicted RBP23.98■■□□□ 1.43
PFDN6-204ENST00000395131 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
PFDN6-204ENST00000395131 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
PFDN6-204ENST00000395131 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
PFDN6-204ENST00000395131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.95■■□□□ 1.435e-21■□□□□ 10
PFDN6-204ENST00000395131 ATP10AO60312 1499 aa23.95■■□□□ 1.42
PFDN6-204ENST00000395131 PLEKHD1A6NEE1 506 aa23.93■■□□□ 1.42
PFDN6-204ENST00000395131 C9orf84Q5VXU9 1444 aa23.92■■□□□ 1.42
PFDN6-204ENST00000395131 SCAPERQ9BY12 1400 aa23.86■■□□□ 1.41
PFDN6-204ENST00000395131 C3P01024 1663 aa23.83■■□□□ 1.4
PFDN6-204ENST00000395131 NCOA1Q15788 1441 aa23.81■■□□□ 1.4
PFDN6-204ENST00000395131 PLCH2O75038 1416 aa23.8■■□□□ 1.4
PFDN6-204ENST00000395131 TRAPPC8Q9Y2L5 1435 aa23.76■■□□□ 1.39
PFDN6-204ENST00000395131 REREQ9P2R6 1566 aa23.75■■□□□ 1.39
PFDN6-204ENST00000395131 UBAP1LF5GYI3 381 aa23.75■■□□□ 1.39
PFDN6-204ENST00000395131 MED1Q15648 1581 aaPredicted RBP23.71■■□□□ 1.39
PFDN6-204ENST00000395131 KDM5CP41229 1560 aa23.7■■□□□ 1.38
PFDN6-204ENST00000395131 ZNF518AQ6AHZ1 1483 aa23.69■■□□□ 1.38
PFDN6-204ENST00000395131 EFCAB2Q5VUJ9 269 aa23.68■■□□□ 1.38
PFDN6-204ENST00000395131 CAMSAP1Q5T5Y3 1602 aa23.68■■□□□ 1.38
PFDN6-204ENST00000395131 AGLP35573 1532 aa23.68■■□□□ 1.38
PFDN6-204ENST00000395131 DIP2CQ9Y2E4 1556 aa23.67■■□□□ 1.38
PFDN6-204ENST00000395131 MYO5CQ9NQX4 1742 aa23.67■■□□□ 1.38
PFDN6-204ENST00000395131 ZNF335Q9H4Z2 1342 aaPredicted RBP23.66■■□□□ 1.38
PFDN6-204ENST00000395131 CNTLNQ9NXG0 1405 aa23.61■■□□□ 1.37
PFDN6-204ENST00000395131 AFAP1Q8N556 730 aa23.61■■□□□ 1.37
PFDN6-204ENST00000395131 NPATQ14207 1427 aa23.6■■□□□ 1.37
PFDN6-204ENST00000395131 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
PFDN6-204ENST00000395131 MLH3Q9UHC1 1453 aa23.6■■□□□ 1.37
PFDN6-204ENST00000395131 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
PFDN6-204ENST00000395131 HSPA1LP34931 641 aa23.58■■□□□ 1.37
PFDN6-204ENST00000395131 CDK13Q14004 1512 aaKnown RBP23.58■■□□□ 1.36
PFDN6-204ENST00000395131 NCKAP5LQ9HCH0 1330 aa23.58■■□□□ 1.36
PFDN6-204ENST00000395131 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
PFDN6-204ENST00000395131 PKD2Q13563 968 aa23.56■■□□□ 1.36
PFDN6-204ENST00000395131 MROH2AA6NES4 1674 aa23.56■■□□□ 1.36
PFDN6-204ENST00000395131 TCOF1Q13428 1488 aaKnown RBP23.53■■□□□ 1.36
PFDN6-204ENST00000395131 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
PFDN6-204ENST00000395131 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
PFDN6-204ENST00000395131 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
PFDN6-204ENST00000395131 SUPT6HQ7KZ85 1726 aaKnown RBP23.48■■□□□ 1.35
PFDN6-204ENST00000395131 ARHGAP5Q13017 1502 aa23.48■■□□□ 1.35
PFDN6-204ENST00000395131 TOM1O60784 492 aa23.47■■□□□ 1.35
PFDN6-204ENST00000395131 ZMYM3Q14202 1370 aa23.47■■□□□ 1.35
PFDN6-204ENST00000395131 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
PFDN6-204ENST00000395131 KIF14Q15058 1648 aa23.46■■□□□ 1.35
PFDN6-204ENST00000395131 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
PFDN6-204ENST00000395131 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
PFDN6-204ENST00000395131 MYO3AQ8NEV4 1616 aa23.44■■□□□ 1.34
PFDN6-204ENST00000395131 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
PFDN6-204ENST00000395131 PIP4K2BP78356 416 aa23.43■■□□□ 1.34
PFDN6-204ENST00000395131 PPP6R1Q9UPN7 881 aa23.43■■□□□ 1.34
PFDN6-204ENST00000395131 CDK11AQ9UQ88 783 aaPredicted RBP23.42■■□□□ 1.34
PFDN6-204ENST00000395131 CEP170BQ9Y4F5 1589 aaPredicted RBP23.42■■□□□ 1.34
PFDN6-204ENST00000395131 CPS1P31327 1500 aa23.42■■□□□ 1.34
PFDN6-204ENST00000395131 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
PFDN6-204ENST00000395131 ITSN2Q9NZM3 1697 aa23.38■■□□□ 1.33
PFDN6-204ENST00000395131 ABCC1P33527 1531 aa23.38■■□□□ 1.33
PFDN6-204ENST00000395131 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
PFDN6-204ENST00000395131 PTPRKQ15262 1439 aa23.35■■□□□ 1.33
PFDN6-204ENST00000395131 CLTCQ00610 1675 aaKnown RBP23.34■■□□□ 1.33
PFDN6-204ENST00000395131 ALKQ9UM73 1620 aa23.33■■□□□ 1.33
PFDN6-204ENST00000395131 SHANK2Q9UPX8 1470 aa23.33■■□□□ 1.33
PFDN6-204ENST00000395131 PREX2Q70Z35 1606 aa23.32■■□□□ 1.32
PFDN6-204ENST00000395131 CLIP1P30622 1438 aa23.31■■□□□ 1.32
PFDN6-204ENST00000395131 POLR1AO95602 1720 aaPredicted RBP23.3■■□□□ 1.32
PFDN6-204ENST00000395131 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
PFDN6-204ENST00000395131 FMN1Q68DA7 1419 aa23.29■■□□□ 1.32
PFDN6-204ENST00000395131 RGS17Q9UGC6 210 aaPredicted RBP23.27■■□□□ 1.32
PFDN6-204ENST00000395131 A2ML1A8K2U0 1454 aa23.27■■□□□ 1.32
PFDN6-204ENST00000395131 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
PFDN6-204ENST00000395131 SAMD9LQ8IVG5 1584 aa23.25■■□□□ 1.31
PFDN6-204ENST00000395131 EEA1Q15075 1411 aa23.25■■□□□ 1.31
PFDN6-204ENST00000395131 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
PFDN6-204ENST00000395131 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
PFDN6-204ENST00000395131 LRRIQ1Q96JM4 1722 aa23.23■■□□□ 1.31
PFDN6-204ENST00000395131 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
PFDN6-204ENST00000395131 CDC42BPAQ5VT25 1732 aa23.19■■□□□ 1.3
PFDN6-204ENST00000395131 SPAG9O60271 1321 aaKnown RBP23.15■■□□□ 1.3
PFDN6-204ENST00000395131 A2MP01023 1474 aa23.15■■□□□ 1.3
PFDN6-204ENST00000395131 ATP7AQ04656 1500 aa23.13■■□□□ 1.29
PFDN6-204ENST00000395131 MED14O60244 1454 aa23.13■■□□□ 1.29
PFDN6-204ENST00000395131 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
PFDN6-204ENST00000395131 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
PFDN6-204ENST00000395131 GGT6Q6P531 493 aa23.12■■□□□ 1.29
PFDN6-204ENST00000395131 INO80Q9ULG1 1556 aaPredicted RBP23.11■■□□□ 1.29
PFDN6-204ENST00000395131 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
PFDN6-204ENST00000395131 ANKLE2Q86XL3 938 aa23.1■■□□□ 1.29
PFDN6-204ENST00000395131 RNF17Q9BXT8 1623 aaKnown RBP23.1■■□□□ 1.29
PFDN6-204ENST00000395131 STRCP1A6NGW2 1772 aa23.09■■□□□ 1.29
PFDN6-204ENST00000395131 LRRC7Q96NW7 1537 aa23.08■■□□□ 1.29
PFDN6-204ENST00000395131 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
PFDN6-204ENST00000395131 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
PFDN6-204ENST00000395131 NPHP4O75161 1426 aaPredicted RBP23.06■■□□□ 1.28
PFDN6-204ENST00000395131 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms