RNA–Protein interactions for RNA: ENST00000390735.2

MIR550A3-201, Transcript of microRNA 550a-3, humanhuman

BASIC

Gene MIR550A3, Length 95 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR550A3-201ENST00000390735 CFAP74Q9C0B2 1584 aa8.95□□□□□ -0.98
MIR550A3-201ENST00000390735 UBAP1LF5GYI3 381 aa8.94□□□□□ -0.98
MIR550A3-201ENST00000390735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.94□□□□□ -0.98
MIR550A3-201ENST00000390735 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
MIR550A3-201ENST00000390735 HECW1Q76N89 1606 aa8.93□□□□□ -0.98
MIR550A3-201ENST00000390735 ATP10AO60312 1499 aa8.92□□□□□ -0.98
MIR550A3-201ENST00000390735 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
MIR550A3-201ENST00000390735 MED1Q15648 1581 aaPredicted RBP8.91□□□□□ -0.98
MIR550A3-201ENST00000390735 RAPGEF6Q8TEU7 1601 aa8.91□□□□□ -0.98
MIR550A3-201ENST00000390735 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
MIR550A3-201ENST00000390735 C9orf84Q5VXU9 1444 aa8.89□□□□□ -0.99
MIR550A3-201ENST00000390735 PLEKHD1A6NEE1 506 aa8.89□□□□□ -0.99
MIR550A3-201ENST00000390735 C3P01024 1663 aa8.88□□□□□ -0.99
MIR550A3-201ENST00000390735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.88□□□□□ -0.99
MIR550A3-201ENST00000390735 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
MIR550A3-201ENST00000390735 ZNF335Q9H4Z2 1342 aaPredicted RBP8.87□□□□□ -0.99
MIR550A3-201ENST00000390735 HSPA1LP34931 641 aa8.87□□□□□ -0.99
MIR550A3-201ENST00000390735 NUP153P49790 1475 aaKnown RBP8.87□□□□□ -0.99
MIR550A3-201ENST00000390735 TRAPPC8Q9Y2L5 1435 aa8.87□□□□□ -0.99
MIR550A3-201ENST00000390735 PHF23Q9BUL5 403 aaPredicted RBP8.85□□□□□ -0.99
MIR550A3-201ENST00000390735 CAMSAP1Q5T5Y3 1602 aa8.84□□□□□ -0.99
MIR550A3-201ENST00000390735 SAMD9Q5K651 1589 aa8.84□□□□□ -0.99
MIR550A3-201ENST00000390735 PRXQ9BXM0 1461 aa8.83□□□□□ -1
MIR550A3-201ENST00000390735 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
MIR550A3-201ENST00000390735 PLCH2O75038 1416 aa8.83□□□□□ -1
MIR550A3-201ENST00000390735 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
MIR550A3-201ENST00000390735 SCAF1Q9H7N4 1312 aaKnown RBP8.82□□□□□ -1
MIR550A3-201ENST00000390735 PIP4K2BP78356 416 aa8.82□□□□□ -1
MIR550A3-201ENST00000390735 TOM1O60784 492 aa8.81□□□□□ -1
MIR550A3-201ENST00000390735 REREQ9P2R6 1566 aa8.81□□□□□ -1
MIR550A3-201ENST00000390735 PKD2Q13563 968 aa8.8□□□□□ -1
MIR550A3-201ENST00000390735 EFCAB2Q5VUJ9 269 aa8.8□□□□□ -1
MIR550A3-201ENST00000390735 ZNF518AQ6AHZ1 1483 aa8.8□□□□□ -1
MIR550A3-201ENST00000390735 AGLP35573 1532 aa8.8□□□□□ -1
MIR550A3-201ENST00000390735 DIP2CQ9Y2E4 1556 aa8.79□□□□□ -1
MIR550A3-201ENST00000390735 AFAP1Q8N556 730 aa8.79□□□□□ -1
MIR550A3-201ENST00000390735 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
MIR550A3-201ENST00000390735 NPATQ14207 1427 aa8.79□□□□□ -1
MIR550A3-201ENST00000390735 CNTLNQ9NXG0 1405 aa8.79□□□□□ -1
MIR550A3-201ENST00000390735 KDM5CP41229 1560 aa8.78□□□□□ -1
MIR550A3-201ENST00000390735 PLA2R1Q13018 1463 aa8.77□□□□□ -1
MIR550A3-201ENST00000390735 MYO5CQ9NQX4 1742 aa8.77□□□□□ -1
MIR550A3-201ENST00000390735 TCOF1Q13428 1488 aaKnown RBP8.77□□□□□ -1.01
MIR550A3-201ENST00000390735 PPP6R1Q9UPN7 881 aa8.76□□□□□ -1.01
MIR550A3-201ENST00000390735 SUPT6HQ7KZ85 1726 aaKnown RBP8.76□□□□□ -1.01
MIR550A3-201ENST00000390735 MLH3Q9UHC1 1453 aa8.76□□□□□ -1.01
MIR550A3-201ENST00000390735 ABCA6Q8N139 1617 aa8.76□□□□□ -1.01
MIR550A3-201ENST00000390735 MROH2AA6NES4 1674 aa8.75□□□□□ -1.01
MIR550A3-201ENST00000390735 RGS17Q9UGC6 210 aaPredicted RBP8.75□□□□□ -1.01
MIR550A3-201ENST00000390735 ZNF142P52746 1687 aaPredicted RBP8.75□□□□□ -1.01
MIR550A3-201ENST00000390735 CPS1P31327 1500 aa8.75□□□□□ -1.01
MIR550A3-201ENST00000390735 ZMYM3Q14202 1370 aa8.74□□□□□ -1.01
MIR550A3-201ENST00000390735 MYO3AQ8NEV4 1616 aa8.73□□□□□ -1.01
MIR550A3-201ENST00000390735 PTPRKQ15262 1439 aa8.73□□□□□ -1.01
MIR550A3-201ENST00000390735 CDK13Q14004 1512 aaKnown RBP8.73□□□□□ -1.01
MIR550A3-201ENST00000390735 CEP170BQ9Y4F5 1589 aaPredicted RBP8.73□□□□□ -1.01
MIR550A3-201ENST00000390735 SHANK2Q9UPX8 1470 aa8.72□□□□□ -1.01
MIR550A3-201ENST00000390735 ARHGAP5Q13017 1502 aa8.72□□□□□ -1.01
MIR550A3-201ENST00000390735 RANGAP1P46060 587 aaPredicted RBP8.72□□□□□ -1.01
MIR550A3-201ENST00000390735 ALKQ9UM73 1620 aa8.72□□□□□ -1.01
MIR550A3-201ENST00000390735 KIDINS220Q9ULH0 1771 aa8.69□□□□□ -1.02
MIR550A3-201ENST00000390735 SENP3Q9H4L4 574 aaPredicted RBP8.69□□□□□ -1.02
MIR550A3-201ENST00000390735 KIF14Q15058 1648 aa8.69□□□□□ -1.02
MIR550A3-201ENST00000390735 CLTCQ00610 1675 aaKnown RBP8.69□□□□□ -1.02
MIR550A3-201ENST00000390735 CDK11AQ9UQ88 783 aaPredicted RBP8.68□□□□□ -1.02
MIR550A3-201ENST00000390735 POLR1AO95602 1720 aaPredicted RBP8.68□□□□□ -1.02
MIR550A3-201ENST00000390735 DNMT1P26358 1616 aaKnown RBP8.67□□□□□ -1.02
MIR550A3-201ENST00000390735 POTEAQ6S8J7 498 aa8.67□□□□□ -1.02
MIR550A3-201ENST00000390735 CSRNP3Q8WYN3 585 aa8.67□□□□□ -1.02
MIR550A3-201ENST00000390735 NEURL4Q96JN8 1562 aa8.67□□□□□ -1.02
MIR550A3-201ENST00000390735 CDC42BPBQ9Y5S2 1711 aa8.67□□□□□ -1.02
MIR550A3-201ENST00000390735 VWDEQ8N2E2 1590 aa8.66□□□□□ -1.02
MIR550A3-201ENST00000390735 ABCC1P33527 1531 aa8.66□□□□□ -1.02
MIR550A3-201ENST00000390735 A2ML1A8K2U0 1454 aa8.66□□□□□ -1.02
MIR550A3-201ENST00000390735 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.02
MIR550A3-201ENST00000390735 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
MIR550A3-201ENST00000390735 TROQ12816 1431 aaPredicted RBP8.64□□□□□ -1.03
MIR550A3-201ENST00000390735 CLIP1P30622 1438 aa8.63□□□□□ -1.03
MIR550A3-201ENST00000390735 ANKLE2Q86XL3 938 aa8.63□□□□□ -1.03
MIR550A3-201ENST00000390735 PREX2Q70Z35 1606 aa8.62□□□□□ -1.03
MIR550A3-201ENST00000390735 GGT6Q6P531 493 aa8.62□□□□□ -1.03
MIR550A3-201ENST00000390735 LRRC7Q96NW7 1537 aa8.62□□□□□ -1.03
MIR550A3-201ENST00000390735 RNF17Q9BXT8 1623 aaKnown RBP8.62□□□□□ -1.03
MIR550A3-201ENST00000390735 SAMD9LQ8IVG5 1584 aa8.61□□□□□ -1.03
MIR550A3-201ENST00000390735 SETD1AO15047 1707 aaKnown RBP8.61□□□□□ -1.03
MIR550A3-201ENST00000390735 MED14O60244 1454 aa8.61□□□□□ -1.03
MIR550A3-201ENST00000390735 STRCP1A6NGW2 1772 aa8.61□□□□□ -1.03
MIR550A3-201ENST00000390735 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
MIR550A3-201ENST00000390735 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
MIR550A3-201ENST00000390735 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
MIR550A3-201ENST00000390735 DEPDC5O75140 1603 aa8.6□□□□□ -1.03
MIR550A3-201ENST00000390735 NPHP4O75161 1426 aaPredicted RBP8.6□□□□□ -1.03
MIR550A3-201ENST00000390735 FMN1Q68DA7 1419 aa8.6□□□□□ -1.03
MIR550A3-201ENST00000390735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.6□□□□□ -1.03
MIR550A3-201ENST00000390735 A2MP01023 1474 aa8.59□□□□□ -1.03
MIR550A3-201ENST00000390735 SYNMO15061 1565 aa8.59□□□□□ -1.03
MIR550A3-201ENST00000390735 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
MIR550A3-201ENST00000390735 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.04
MIR550A3-201ENST00000390735 IQGAP1P46940 1657 aa8.58□□□□□ -1.04
MIR550A3-201ENST00000390735 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms