RNA–Protein interactions for RNA: ENST00000390433.1

TRAV12-1-201, Transcript of T cell receptor alpha variable 12-1, humanhuman

APPRIS P1 BASIC

Gene TRAV12-1, Length 340 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1-201ENST00000390433 ZMYM4Q5VZL5 1548 aa12.09□□□□□ -0.47
TRAV12-1-201ENST00000390433 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
TRAV12-1-201ENST00000390433 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
TRAV12-1-201ENST00000390433 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.47
TRAV12-1-201ENST00000390433 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
TRAV12-1-201ENST00000390433 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
TRAV12-1-201ENST00000390433 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
TRAV12-1-201ENST00000390433 HECW1Q76N89 1606 aa12.06□□□□□ -0.48
TRAV12-1-201ENST00000390433 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
TRAV12-1-201ENST00000390433 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
TRAV12-1-201ENST00000390433 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
TRAV12-1-201ENST00000390433 ATP10AO60312 1499 aa12.03□□□□□ -0.48
TRAV12-1-201ENST00000390433 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
TRAV12-1-201ENST00000390433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAV12-1-201ENST00000390433 SCAPERQ9BY12 1400 aa12□□□□□ -0.49
TRAV12-1-201ENST00000390433 NUP153P49790 1475 aaKnown RBP11.99□□□□□ -0.49
TRAV12-1-201ENST00000390433 C3P01024 1663 aa11.98□□□□□ -0.49
TRAV12-1-201ENST00000390433 PRXQ9BXM0 1461 aa11.98□□□□□ -0.49
TRAV12-1-201ENST00000390433 MED1Q15648 1581 aaPredicted RBP11.97□□□□□ -0.49
TRAV12-1-201ENST00000390433 NCOA1Q15788 1441 aa11.96□□□□□ -0.49
TRAV12-1-201ENST00000390433 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
TRAV12-1-201ENST00000390433 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
TRAV12-1-201ENST00000390433 ZNF335Q9H4Z2 1342 aaPredicted RBP11.95□□□□□ -0.5
TRAV12-1-201ENST00000390433 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
TRAV12-1-201ENST00000390433 TRAPPC8Q9Y2L5 1435 aa11.94□□□□□ -0.5
TRAV12-1-201ENST00000390433 PHF23Q9BUL5 403 aaPredicted RBP11.94□□□□□ -0.5
TRAV12-1-201ENST00000390433 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
TRAV12-1-201ENST00000390433 HSPA1LP34931 641 aa11.93□□□□□ -0.5
TRAV12-1-201ENST00000390433 PLCH2O75038 1416 aa11.93□□□□□ -0.5
TRAV12-1-201ENST00000390433 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
TRAV12-1-201ENST00000390433 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
TRAV12-1-201ENST00000390433 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
TRAV12-1-201ENST00000390433 EFCAB2Q5VUJ9 269 aa11.91□□□□□ -0.5
TRAV12-1-201ENST00000390433 RANGAP1P46060 587 aaPredicted RBP11.9□□□□□ -0.5
TRAV12-1-201ENST00000390433 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
TRAV12-1-201ENST00000390433 MYO5CQ9NQX4 1742 aa11.88□□□□□ -0.51
TRAV12-1-201ENST00000390433 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
TRAV12-1-201ENST00000390433 SUPT6HQ7KZ85 1726 aaKnown RBP11.87□□□□□ -0.51
TRAV12-1-201ENST00000390433 LOC105371045A0A1W2PR82 267 aa11.87□□□□□ -0.51
TRAV12-1-201ENST00000390433 TOM1O60784 492 aa11.87□□□□□ -0.51
TRAV12-1-201ENST00000390433 DIP2CQ9Y2E4 1556 aa11.87□□□□□ -0.51
TRAV12-1-201ENST00000390433 PKD2Q13563 968 aa11.86□□□□□ -0.51
TRAV12-1-201ENST00000390433 REREQ9P2R6 1566 aa11.86□□□□□ -0.51
TRAV12-1-201ENST00000390433 AGLP35573 1532 aa11.86□□□□□ -0.51
TRAV12-1-201ENST00000390433 KDM5CP41229 1560 aa11.85□□□□□ -0.51
TRAV12-1-201ENST00000390433 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
TRAV12-1-201ENST00000390433 CDK13Q14004 1512 aaKnown RBP11.84□□□□□ -0.51
TRAV12-1-201ENST00000390433 ABCA6Q8N139 1617 aa11.83□□□□□ -0.52
TRAV12-1-201ENST00000390433 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
TRAV12-1-201ENST00000390433 NPATQ14207 1427 aa11.83□□□□□ -0.52
TRAV12-1-201ENST00000390433 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
TRAV12-1-201ENST00000390433 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
TRAV12-1-201ENST00000390433 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
TRAV12-1-201ENST00000390433 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
TRAV12-1-201ENST00000390433 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
TRAV12-1-201ENST00000390433 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
TRAV12-1-201ENST00000390433 ZNF142P52746 1687 aaPredicted RBP11.79□□□□□ -0.52
TRAV12-1-201ENST00000390433 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
TRAV12-1-201ENST00000390433 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
TRAV12-1-201ENST00000390433 CDK11AQ9UQ88 783 aaPredicted RBP11.78□□□□□ -0.52
TRAV12-1-201ENST00000390433 CPS1P31327 1500 aa11.77□□□□□ -0.52
TRAV12-1-201ENST00000390433 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
TRAV12-1-201ENST00000390433 MYO3AQ8NEV4 1616 aa11.77□□□□□ -0.53
TRAV12-1-201ENST00000390433 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
TRAV12-1-201ENST00000390433 KIF14Q15058 1648 aa11.76□□□□□ -0.53
TRAV12-1-201ENST00000390433 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
TRAV12-1-201ENST00000390433 CDC42BPBQ9Y5S2 1711 aa11.75□□□□□ -0.53
TRAV12-1-201ENST00000390433 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
TRAV12-1-201ENST00000390433 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
TRAV12-1-201ENST00000390433 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
TRAV12-1-201ENST00000390433 SHANK2Q9UPX8 1470 aa11.74□□□□□ -0.53
TRAV12-1-201ENST00000390433 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
TRAV12-1-201ENST00000390433 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
TRAV12-1-201ENST00000390433 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
TRAV12-1-201ENST00000390433 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
TRAV12-1-201ENST00000390433 ABCC1P33527 1531 aa11.7□□□□□ -0.54
TRAV12-1-201ENST00000390433 CLIP1P30622 1438 aa11.7□□□□□ -0.54
TRAV12-1-201ENST00000390433 DNMT1P26358 1616 aaKnown RBP11.7□□□□□ -0.54
TRAV12-1-201ENST00000390433 ALKQ9UM73 1620 aa11.7□□□□□ -0.54
TRAV12-1-201ENST00000390433 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
TRAV12-1-201ENST00000390433 A2ML1A8K2U0 1454 aa11.69□□□□□ -0.54
TRAV12-1-201ENST00000390433 GGT6Q6P531 493 aa11.68□□□□□ -0.54
TRAV12-1-201ENST00000390433 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
TRAV12-1-201ENST00000390433 NEURL4Q96JN8 1562 aa11.67□□□□□ -0.54
TRAV12-1-201ENST00000390433 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
TRAV12-1-201ENST00000390433 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
TRAV12-1-201ENST00000390433 FMN1Q68DA7 1419 aa11.66□□□□□ -0.54
TRAV12-1-201ENST00000390433 SAMD9LQ8IVG5 1584 aa11.66□□□□□ -0.54
TRAV12-1-201ENST00000390433 VWDEQ8N2E2 1590 aa11.66□□□□□ -0.54
TRAV12-1-201ENST00000390433 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
TRAV12-1-201ENST00000390433 ZNF777Q9ULD5 760 aaPredicted RBP11.64□□□□□ -0.55
TRAV12-1-201ENST00000390433 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
TRAV12-1-201ENST00000390433 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
TRAV12-1-201ENST00000390433 LRRIQ1Q96JM4 1722 aa11.62□□□□□ -0.55
TRAV12-1-201ENST00000390433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAV12-1-201ENST00000390433 A2MP01023 1474 aa11.62□□□□□ -0.55
TRAV12-1-201ENST00000390433 RNF17Q9BXT8 1623 aaKnown RBP11.61□□□□□ -0.55
TRAV12-1-201ENST00000390433 HNRNPMP52272 730 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAV12-1-201ENST00000390433 THEMISQ8N1K5 641 aaPredicted RBP11.61□□□□□ -0.55
TRAV12-1-201ENST00000390433 PLXNC1O60486 1568 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms