RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 CFAP74Q9C0B2 1584 aa10.92□□□□□ -0.66
TRAV1-2-201ENST00000390423 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
TRAV1-2-201ENST00000390423 PRXQ9BXM0 1461 aa10.92□□□□□ -0.66
TRAV1-2-201ENST00000390423 SAMD9Q5K651 1589 aa10.91□□□□□ -0.66
TRAV1-2-201ENST00000390423 MAGI2Q86UL8 1455 aa10.91□□□□□ -0.66
TRAV1-2-201ENST00000390423 PTPRTO14522 1441 aa10.91□□□□□ -0.66
TRAV1-2-201ENST00000390423 UHRF1BP1Q6BDS2 1440 aa10.91□□□□□ -0.66
TRAV1-2-201ENST00000390423 ATP10AO60312 1499 aa10.88□□□□□ -0.67
TRAV1-2-201ENST00000390423 IQSEC2Q5JU85 1478 aa10.88□□□□□ -0.67
TRAV1-2-201ENST00000390423 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
TRAV1-2-201ENST00000390423 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
TRAV1-2-201ENST00000390423 C3P01024 1663 aa10.86□□□□□ -0.67
TRAV1-2-201ENST00000390423 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
TRAV1-2-201ENST00000390423 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
TRAV1-2-201ENST00000390423 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
TRAV1-2-201ENST00000390423 PLEKHD1A6NEE1 506 aa10.84□□□□□ -0.67
TRAV1-2-201ENST00000390423 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.68
TRAV1-2-201ENST00000390423 SETD1BQ9UPS6 1966 aaKnown RBP10.83□□□□□ -0.68
TRAV1-2-201ENST00000390423 ZNF335Q9H4Z2 1342 aaPredicted RBP10.83□□□□□ -0.68
TRAV1-2-201ENST00000390423 RANGAP1P46060 587 aaPredicted RBP10.82□□□□□ -0.68
TRAV1-2-201ENST00000390423 CDK13Q14004 1512 aaKnown RBP10.81□□□□□ -0.68
TRAV1-2-201ENST00000390423 PLCH2O75038 1416 aa10.81□□□□□ -0.68
TRAV1-2-201ENST00000390423 DIP2CQ9Y2E4 1556 aa10.81□□□□□ -0.68
TRAV1-2-201ENST00000390423 CAMSAP1Q5T5Y3 1602 aa10.8□□□□□ -0.68
TRAV1-2-201ENST00000390423 ABCA6Q8N139 1617 aa10.79□□□□□ -0.68
TRAV1-2-201ENST00000390423 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
TRAV1-2-201ENST00000390423 KDM5CP41229 1560 aa10.78□□□□□ -0.68
TRAV1-2-201ENST00000390423 TRAPPC8Q9Y2L5 1435 aa10.78□□□□□ -0.68
TRAV1-2-201ENST00000390423 HSPA1LP34931 641 aa10.78□□□□□ -0.68
TRAV1-2-201ENST00000390423 AFAP1Q8N556 730 aa10.78□□□□□ -0.68
TRAV1-2-201ENST00000390423 ZNF518AQ6AHZ1 1483 aa10.76□□□□□ -0.69
TRAV1-2-201ENST00000390423 MYO5CQ9NQX4 1742 aa10.76□□□□□ -0.69
TRAV1-2-201ENST00000390423 REREQ9P2R6 1566 aa10.76□□□□□ -0.69
TRAV1-2-201ENST00000390423 KIF14Q15058 1648 aa10.75□□□□□ -0.69
TRAV1-2-201ENST00000390423 EFCAB2Q5VUJ9 269 aa10.74□□□□□ -0.69
TRAV1-2-201ENST00000390423 SCAF1Q9H7N4 1312 aaKnown RBP10.74□□□□□ -0.69
TRAV1-2-201ENST00000390423 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
TRAV1-2-201ENST00000390423 MYT1LQ9UL68 1186 aa10.73□□□□□ -0.69
TRAV1-2-201ENST00000390423 AGLP35573 1532 aa10.73□□□□□ -0.69
TRAV1-2-201ENST00000390423 ARHGAP5Q13017 1502 aa10.72□□□□□ -0.69
TRAV1-2-201ENST00000390423 MYO3AQ8NEV4 1616 aa10.71□□□□□ -0.69
TRAV1-2-201ENST00000390423 TCOF1Q13428 1488 aaKnown RBP10.7□□□□□ -0.7
TRAV1-2-201ENST00000390423 MLH3Q9UHC1 1453 aa10.7□□□□□ -0.7
TRAV1-2-201ENST00000390423 NPATQ14207 1427 aa10.7□□□□□ -0.7
TRAV1-2-201ENST00000390423 PHF23Q9BUL5 403 aaPredicted RBP10.7□□□□□ -0.7
TRAV1-2-201ENST00000390423 ESF1Q9H501 851 aaKnown RBP10.7□□□□□ -0.7
TRAV1-2-201ENST00000390423 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
TRAV1-2-201ENST00000390423 MROH2AA6NES4 1674 aa10.69□□□□□ -0.7
TRAV1-2-201ENST00000390423 ALKQ9UM73 1620 aa10.69□□□□□ -0.7
TRAV1-2-201ENST00000390423 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
TRAV1-2-201ENST00000390423 CNTLNQ9NXG0 1405 aa10.68□□□□□ -0.7
TRAV1-2-201ENST00000390423 KIDINS220Q9ULH0 1771 aa10.68□□□□□ -0.7
TRAV1-2-201ENST00000390423 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
TRAV1-2-201ENST00000390423 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
TRAV1-2-201ENST00000390423 CEP170BQ9Y4F5 1589 aaPredicted RBP10.68□□□□□ -0.7
TRAV1-2-201ENST00000390423 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
TRAV1-2-201ENST00000390423 ABCC1P33527 1531 aa10.67□□□□□ -0.7
TRAV1-2-201ENST00000390423 CDC42BPBQ9Y5S2 1711 aa10.67□□□□□ -0.7
TRAV1-2-201ENST00000390423 SENP3Q9H4L4 574 aaPredicted RBP10.66□□□□□ -0.7
TRAV1-2-201ENST00000390423 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
TRAV1-2-201ENST00000390423 CLTCQ00610 1675 aaKnown RBP10.66□□□□□ -0.7
TRAV1-2-201ENST00000390423 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
TRAV1-2-201ENST00000390423 PKD2Q13563 968 aa10.65□□□□□ -0.7
TRAV1-2-201ENST00000390423 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
TRAV1-2-201ENST00000390423 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
TRAV1-2-201ENST00000390423 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
TRAV1-2-201ENST00000390423 TOM1O60784 492 aa10.63□□□□□ -0.71
TRAV1-2-201ENST00000390423 RGS17Q9UGC6 210 aaPredicted RBP10.63□□□□□ -0.71
TRAV1-2-201ENST00000390423 NEURL4Q96JN8 1562 aa10.63□□□□□ -0.71
TRAV1-2-201ENST00000390423 LRRIQ1Q96JM4 1722 aa10.63□□□□□ -0.71
TRAV1-2-201ENST00000390423 PREX2Q70Z35 1606 aa10.62□□□□□ -0.71
TRAV1-2-201ENST00000390423 CPS1P31327 1500 aa10.62□□□□□ -0.71
TRAV1-2-201ENST00000390423 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
TRAV1-2-201ENST00000390423 SAMD9LQ8IVG5 1584 aa10.6□□□□□ -0.71
TRAV1-2-201ENST00000390423 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
TRAV1-2-201ENST00000390423 DNMT1P26358 1616 aaKnown RBP10.6□□□□□ -0.71
TRAV1-2-201ENST00000390423 POLR1AO95602 1720 aaPredicted RBP10.6□□□□□ -0.71
TRAV1-2-201ENST00000390423 CLIP1P30622 1438 aa10.58□□□□□ -0.72
TRAV1-2-201ENST00000390423 PLXNC1O60486 1568 aa10.58□□□□□ -0.72
TRAV1-2-201ENST00000390423 A2ML1A8K2U0 1454 aa10.58□□□□□ -0.72
TRAV1-2-201ENST00000390423 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
TRAV1-2-201ENST00000390423 CDC42BPAQ5VT25 1732 aa10.57□□□□□ -0.72
TRAV1-2-201ENST00000390423 SYCP2Q9BX26 1530 aa10.56□□□□□ -0.72
TRAV1-2-201ENST00000390423 STRCP1A6NGW2 1772 aa10.56□□□□□ -0.72
TRAV1-2-201ENST00000390423 FMN1Q68DA7 1419 aa10.56□□□□□ -0.72
TRAV1-2-201ENST00000390423 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
TRAV1-2-201ENST00000390423 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
TRAV1-2-201ENST00000390423 ATP7AQ04656 1500 aa10.54□□□□□ -0.72
TRAV1-2-201ENST00000390423 GGT6Q6P531 493 aa10.54□□□□□ -0.72
TRAV1-2-201ENST00000390423 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
TRAV1-2-201ENST00000390423 INO80Q9ULG1 1556 aaPredicted RBP10.54□□□□□ -0.72
TRAV1-2-201ENST00000390423 A2MP01023 1474 aa10.54□□□□□ -0.72
TRAV1-2-201ENST00000390423 SPAG9O60271 1321 aaKnown RBP10.54□□□□□ -0.72
TRAV1-2-201ENST00000390423 EHMT2Q96KQ7 1210 aa10.53□□□□□ -0.72
TRAV1-2-201ENST00000390423 ZNF777Q9ULD5 760 aaPredicted RBP10.53□□□□□ -0.72
TRAV1-2-201ENST00000390423 LRRC7Q96NW7 1537 aa10.53□□□□□ -0.72
TRAV1-2-201ENST00000390423 RNF17Q9BXT8 1623 aaKnown RBP10.52□□□□□ -0.73
TRAV1-2-201ENST00000390423 HNRNPMP52272 730 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAV1-2-201ENST00000390423 FBXO31Q5XUX0 539 aaPredicted RBP10.52□□□□□ -0.73
TRAV1-2-201ENST00000390423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms