RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 ST20-MTHFSA0A0A6YYL1 179 aa19.63■□□□□ 0.73
TUSC3-201ENST00000382020 ZBED9Q6R2W3 1325 aa19.61■□□□□ 0.73
TUSC3-201ENST00000382020 TNNT2P45379 298 aaPredicted RBP19.61■□□□□ 0.73
TUSC3-201ENST00000382020 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
TUSC3-201ENST00000382020 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
TUSC3-201ENST00000382020 WDR43Q15061 677 aaKnown RBP eCLIP19.6■□□□□ 0.73
TUSC3-201ENST00000382020 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
TUSC3-201ENST00000382020 CCDC7Q96M83 1385 aa19.59■□□□□ 0.73
TUSC3-201ENST00000382020 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
TUSC3-201ENST00000382020 CDCA7LQ96GN5 454 aa19.57■□□□□ 0.72
TUSC3-201ENST00000382020 SPRYD3Q8NCJ5 442 aa19.56■□□□□ 0.72
TUSC3-201ENST00000382020 PPM1GO15355 546 aaPredicted RBP19.56■□□□□ 0.72
TUSC3-201ENST00000382020 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
TUSC3-201ENST00000382020 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
TUSC3-201ENST00000382020 TIAM1Q13009 1591 aa19.54■□□□□ 0.72
TUSC3-201ENST00000382020 CFTRP13569 1480 aa19.54■□□□□ 0.72
TUSC3-201ENST00000382020 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
TUSC3-201ENST00000382020 PDE4AP27815 886 aa19.51■□□□□ 0.71
TUSC3-201ENST00000382020 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
TUSC3-201ENST00000382020 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
TUSC3-201ENST00000382020 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
TUSC3-201ENST00000382020 CCDC146Q8IYE0 955 aa19.49■□□□□ 0.71
TUSC3-201ENST00000382020 PTPRKQ15262 1439 aa19.48■□□□□ 0.71
TUSC3-201ENST00000382020 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
TUSC3-201ENST00000382020 NUP155O75694 1391 aa19.48■□□□□ 0.71
TUSC3-201ENST00000382020 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.71
TUSC3-201ENST00000382020 USP47Q96K76 1375 aa19.47■□□□□ 0.71
TUSC3-201ENST00000382020 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
TUSC3-201ENST00000382020 CRBNQ96SW2 442 aa19.46■□□□□ 0.71
TUSC3-201ENST00000382020 SLKQ9H2G2 1235 aaPredicted RBP19.46■□□□□ 0.71
TUSC3-201ENST00000382020 NCOA2Q15596 1464 aa19.46■□□□□ 0.71
TUSC3-201ENST00000382020 HNRNPMP52272 730 aaKnown RBP eCLIP19.46■□□□□ 0.712e-6■■■■□ 21.8
TUSC3-201ENST00000382020 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
TUSC3-201ENST00000382020 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
TUSC3-201ENST00000382020 NAIPQ13075 1403 aa19.43■□□□□ 0.7
TUSC3-201ENST00000382020 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
TUSC3-201ENST00000382020 NAP1L5Q96NT1 182 aaPredicted RBP19.43■□□□□ 0.7
TUSC3-201ENST00000382020 KNSTRNQ9Y448 316 aa19.42■□□□□ 0.7
TUSC3-201ENST00000382020 FANCD2Q9BXW9 1451 aa19.42■□□□□ 0.7
TUSC3-201ENST00000382020 GSE1Q14687 1217 aa19.42■□□□□ 0.7
TUSC3-201ENST00000382020 GLIPR1L2Q4G1C9 344 aa19.41■□□□□ 0.7
TUSC3-201ENST00000382020 PCF11O94913 1555 aaKnown RBP19.41■□□□□ 0.7
TUSC3-201ENST00000382020 NESP48681 1621 aa19.4■□□□□ 0.7
TUSC3-201ENST00000382020 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.69
TUSC3-201ENST00000382020 DDRGK1Q96HY6 314 aa19.39■□□□□ 0.69
TUSC3-201ENST00000382020 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
TUSC3-201ENST00000382020 CASKIN1Q8WXD9 1431 aa19.36■□□□□ 0.69
TUSC3-201ENST00000382020 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
TUSC3-201ENST00000382020 PANK3Q9H999 370 aa19.36■□□□□ 0.69
TUSC3-201ENST00000382020 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
TUSC3-201ENST00000382020 GZF1Q9H116 711 aaPredicted RBP19.35■□□□□ 0.69
TUSC3-201ENST00000382020 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.35■□□□□ 0.69
TUSC3-201ENST00000382020 VSIG10Q8N0Z9 540 aa19.34■□□□□ 0.69
TUSC3-201ENST00000382020 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
TUSC3-201ENST00000382020 PNISRQ8TF01 805 aaKnown RBP19.33■□□□□ 0.69
TUSC3-201ENST00000382020 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.69
TUSC3-201ENST00000382020 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.69
TUSC3-201ENST00000382020 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
TUSC3-201ENST00000382020 NFKBIBQ15653 356 aa19.32■□□□□ 0.68
TUSC3-201ENST00000382020 NLRP13Q86W25 1043 aa19.32■□□□□ 0.68
TUSC3-201ENST00000382020 RRP7AQ9Y3A4 280 aaKnown RBP19.31■□□□□ 0.68
TUSC3-201ENST00000382020 USP35Q9P2H5 1018 aa19.3■□□□□ 0.68
TUSC3-201ENST00000382020 MYBBP1AQ9BQG0 1328 aaKnown RBP19.29■□□□□ 0.68
TUSC3-201ENST00000382020 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
TUSC3-201ENST00000382020 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
TUSC3-201ENST00000382020 HSP90AA1P07900 732 aaKnown RBP19.27■□□□□ 0.68
TUSC3-201ENST00000382020 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
TUSC3-201ENST00000382020 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.68
TUSC3-201ENST00000382020 RALBP1Q15311 655 aa19.26■□□□□ 0.67
TUSC3-201ENST00000382020 BIVM-ERCC5R4GMW8 1640 aa19.26■□□□□ 0.67
TUSC3-201ENST00000382020 TMF1P82094 1093 aa19.25■□□□□ 0.67
TUSC3-201ENST00000382020 FYCO1Q9BQS8 1478 aa19.24■□□□□ 0.67
TUSC3-201ENST00000382020 FRAT2O75474 233 aaPredicted RBP19.23■□□□□ 0.67
TUSC3-201ENST00000382020 KIF15Q9NS87 1388 aa19.23■□□□□ 0.67
TUSC3-201ENST00000382020 PKNOX2Q96KN3 472 aa19.23■□□□□ 0.67
TUSC3-201ENST00000382020 CDK13Q14004 1512 aaKnown RBP19.22■□□□□ 0.67
TUSC3-201ENST00000382020 ADAMTS8Q9UP79 889 aa19.22■□□□□ 0.67
TUSC3-201ENST00000382020 APAF1O14727 1248 aa19.2■□□□□ 0.66
TUSC3-201ENST00000382020 TPRNQ4KMQ1 711 aa19.2■□□□□ 0.66
TUSC3-201ENST00000382020 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
TUSC3-201ENST00000382020 COG6Q9Y2V7 657 aa19.19■□□□□ 0.66
TUSC3-201ENST00000382020 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
TUSC3-201ENST00000382020 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
TUSC3-201ENST00000382020 NUTM2DQ5VT03 806 aaPredicted RBP19.18■□□□□ 0.66
TUSC3-201ENST00000382020 BACH2Q9BYV9 841 aa19.18■□□□□ 0.66
TUSC3-201ENST00000382020 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
TUSC3-201ENST00000382020 RSPH6AQ9H0K4 717 aa19.16■□□□□ 0.66
TUSC3-201ENST00000382020 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
TUSC3-201ENST00000382020 ARID3AQ99856 593 aa19.15■□□□□ 0.66
TUSC3-201ENST00000382020 NCOA1Q15788 1441 aa19.14■□□□□ 0.65
TUSC3-201ENST00000382020 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
TUSC3-201ENST00000382020 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
TUSC3-201ENST00000382020 PNNQ9H307 717 aaKnown RBP19.13■□□□□ 0.65
TUSC3-201ENST00000382020 FOXD4L1Q9NU39 408 aa19.13■□□□□ 0.65
TUSC3-201ENST00000382020 PTPN23Q9H3S7 1636 aa19.13■□□□□ 0.65
TUSC3-201ENST00000382020 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
TUSC3-201ENST00000382020 BECN1Q14457 450 aa19.12■□□□□ 0.65
TUSC3-201ENST00000382020 BCAR3O75815 825 aa19.12■□□□□ 0.65
TUSC3-201ENST00000382020 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
TUSC3-201ENST00000382020 PANK1Q8TE04 598 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms