RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 FRMPD1Q5SYB0 1578 aa10.3□□□□□ -0.76
MSL3-204ENST00000380691 AKNAQ7Z591 1439 aa10.28□□□□□ -0.76
MSL3-204ENST00000380691 GOLGA3Q08378 1498 aa10.27□□□□□ -0.77
MSL3-204ENST00000380691 PTPRTO14522 1441 aa10.26□□□□□ -0.77
MSL3-204ENST00000380691 ABCA9Q8IUA7 1624 aa10.25□□□□□ -0.77
MSL3-204ENST00000380691 TTC37Q6PGP7 1564 aa10.25□□□□□ -0.77
MSL3-204ENST00000380691 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
MSL3-204ENST00000380691 DENND4BO75064 1496 aaPredicted RBP10.24□□□□□ -0.77
MSL3-204ENST00000380691 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
MSL3-204ENST00000380691 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
MSL3-204ENST00000380691 UHRF1BP1Q6BDS2 1440 aa10.23□□□□□ -0.77
MSL3-204ENST00000380691 SUPT5HO00267 1087 aaKnown RBP10.22□□□□□ -0.77
MSL3-204ENST00000380691 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
MSL3-204ENST00000380691 ATP10BO94823 1461 aa10.21□□□□□ -0.78
MSL3-204ENST00000380691 MAGI2Q86UL8 1455 aa10.21□□□□□ -0.78
MSL3-204ENST00000380691 EFCAB5A4FU69 1503 aa10.21□□□□□ -0.78
MSL3-204ENST00000380691 ZMYM4Q5VZL5 1548 aa10.21□□□□□ -0.78
MSL3-204ENST00000380691 ZFYVE16Q7Z3T8 1539 aa10.21□□□□□ -0.78
MSL3-204ENST00000380691 MLECQ14165 292 aa10.2□□□□□ -0.78
MSL3-204ENST00000380691 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
MSL3-204ENST00000380691 U3KPZ7 1027 aaPredicted RBP10.2□□□□□ -0.78
MSL3-204ENST00000380691 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
MSL3-204ENST00000380691 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
MSL3-204ENST00000380691 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
MSL3-204ENST00000380691 UBAP1LF5GYI3 381 aa10.17□□□□□ -0.78
MSL3-204ENST00000380691 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
MSL3-204ENST00000380691 STRCQ7RTU9 1775 aa10.16□□□□□ -0.78
MSL3-204ENST00000380691 MED1Q15648 1581 aaPredicted RBP10.16□□□□□ -0.78
MSL3-204ENST00000380691 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.78
MSL3-204ENST00000380691 FER1L4A9Z1Z3 1794 aa10.15□□□□□ -0.78
MSL3-204ENST00000380691 NCOA1Q15788 1441 aa10.15□□□□□ -0.79
MSL3-204ENST00000380691 RICTORQ6R327 1708 aa10.14□□□□□ -0.79
MSL3-204ENST00000380691 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
MSL3-204ENST00000380691 CFAP74Q9C0B2 1584 aa10.13□□□□□ -0.79
MSL3-204ENST00000380691 SIGLEC1Q9BZZ2 1709 aa10.13□□□□□ -0.79
MSL3-204ENST00000380691 ATP10AO60312 1499 aa10.12□□□□□ -0.79
MSL3-204ENST00000380691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
MSL3-204ENST00000380691 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
MSL3-204ENST00000380691 HECW1Q76N89 1606 aa10.1□□□□□ -0.79
MSL3-204ENST00000380691 HSPA1LP34931 641 aa10.09□□□□□ -0.79
MSL3-204ENST00000380691 ZNF335Q9H4Z2 1342 aaPredicted RBP10.08□□□□□ -0.8
MSL3-204ENST00000380691 TRAPPC8Q9Y2L5 1435 aa10.08□□□□□ -0.8
MSL3-204ENST00000380691 CAPN15O75808 1086 aa10.07□□□□□ -0.8
MSL3-204ENST00000380691 FOXD4L1Q9NU39 408 aa10.07□□□□□ -0.8
MSL3-204ENST00000380691 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
MSL3-204ENST00000380691 CTTNBP2Q8WZ74 1663 aa10.06□□□□□ -0.8
MSL3-204ENST00000380691 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
MSL3-204ENST00000380691 PLEKHD1A6NEE1 506 aa10.05□□□□□ -0.8
MSL3-204ENST00000380691 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
MSL3-204ENST00000380691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.04□□□□□ -0.8
MSL3-204ENST00000380691 APLP2Q06481 763 aa10.04□□□□□ -0.8
MSL3-204ENST00000380691 P3H3Q8IVL6 736 aa10.04□□□□□ -0.8
MSL3-204ENST00000380691 ZBTB22O15209 634 aa10.03□□□□□ -0.8
MSL3-204ENST00000380691 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
MSL3-204ENST00000380691 CNTLNQ9NXG0 1405 aa10.02□□□□□ -0.81
MSL3-204ENST00000380691 TOM1O60784 492 aa10.02□□□□□ -0.81
MSL3-204ENST00000380691 PIP4K2BP78356 416 aa10.02□□□□□ -0.81
MSL3-204ENST00000380691 PKD2Q13563 968 aa10.02□□□□□ -0.81
MSL3-204ENST00000380691 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
MSL3-204ENST00000380691 PLA2R1Q13018 1463 aa10.02□□□□□ -0.81
MSL3-204ENST00000380691 PLCH2O75038 1416 aa10.01□□□□□ -0.81
MSL3-204ENST00000380691 NPATQ14207 1427 aa10.01□□□□□ -0.81
MSL3-204ENST00000380691 SPINK5Q9NQ38 1064 aaPredicted RBP10.01□□□□□ -0.81
MSL3-204ENST00000380691 ZNF518AQ6AHZ1 1483 aa10.01□□□□□ -0.81
MSL3-204ENST00000380691 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
MSL3-204ENST00000380691 NCKAP5LQ9HCH0 1330 aa10□□□□□ -0.81
MSL3-204ENST00000380691 REREQ9P2R6 1566 aa10□□□□□ -0.81
MSL3-204ENST00000380691 AGLP35573 1532 aa9.99□□□□□ -0.81
MSL3-204ENST00000380691 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
MSL3-204ENST00000380691 SAMD9Q5K651 1589 aa9.98□□□□□ -0.81
MSL3-204ENST00000380691 SETD1BQ9UPS6 1966 aaKnown RBP9.98□□□□□ -0.81
MSL3-204ENST00000380691 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
MSL3-204ENST00000380691 EFCAB2Q5VUJ9 269 aa9.97□□□□□ -0.81
MSL3-204ENST00000380691 CPS1P31327 1500 aa9.97□□□□□ -0.81
MSL3-204ENST00000380691 KDM5CP41229 1560 aa9.97□□□□□ -0.81
MSL3-204ENST00000380691 C3P01024 1663 aa9.96□□□□□ -0.81
MSL3-204ENST00000380691 PTPRKQ15262 1439 aa9.96□□□□□ -0.82
MSL3-204ENST00000380691 DIP2CQ9Y2E4 1556 aa9.96□□□□□ -0.82
MSL3-204ENST00000380691 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
MSL3-204ENST00000380691 MYT1LQ9UL68 1186 aa9.94□□□□□ -0.82
MSL3-204ENST00000380691 MLH3Q9UHC1 1453 aa9.93□□□□□ -0.82
MSL3-204ENST00000380691 AFAP1Q8N556 730 aa9.93□□□□□ -0.82
MSL3-204ENST00000380691 DSG3P32926 999 aa9.92□□□□□ -0.82
MSL3-204ENST00000380691 RGS17Q9UGC6 210 aaPredicted RBP9.92□□□□□ -0.82
MSL3-204ENST00000380691 SHANK2Q9UPX8 1470 aa9.91□□□□□ -0.82
MSL3-204ENST00000380691 ZMYM3Q14202 1370 aa9.9□□□□□ -0.82
MSL3-204ENST00000380691 CEP170BQ9Y4F5 1589 aaPredicted RBP9.9□□□□□ -0.82
MSL3-204ENST00000380691 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
MSL3-204ENST00000380691 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.83
MSL3-204ENST00000380691 ABCA6Q8N139 1617 aa9.89□□□□□ -0.83
MSL3-204ENST00000380691 MYO3AQ8NEV4 1616 aa9.88□□□□□ -0.83
MSL3-204ENST00000380691 ARHGAP5Q13017 1502 aa9.87□□□□□ -0.83
MSL3-204ENST00000380691 CDK13Q14004 1512 aaKnown RBP9.87□□□□□ -0.83
MSL3-204ENST00000380691 ALKQ9UM73 1620 aa9.87□□□□□ -0.83
MSL3-204ENST00000380691 MROH2AA6NES4 1674 aa9.87□□□□□ -0.83
MSL3-204ENST00000380691 A2ML1A8K2U0 1454 aa9.85□□□□□ -0.83
MSL3-204ENST00000380691 POTEAQ6S8J7 498 aa9.85□□□□□ -0.83
MSL3-204ENST00000380691 CDK11AQ9UQ88 783 aaPredicted RBP9.84□□□□□ -0.83
MSL3-204ENST00000380691 ABCB7O75027 752 aa9.83□□□□□ -0.84
MSL3-204ENST00000380691 NEURL4Q96JN8 1562 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms