RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
VPS16-202ENST00000380445 ABCC5O15440 1437 aa18.07■□□□□ 0.48
VPS16-202ENST00000380445 TRIM52Q96A61 297 aa18.06■□□□□ 0.48
VPS16-202ENST00000380445 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
VPS16-202ENST00000380445 PTPRGP23470 1445 aa18.04■□□□□ 0.48
VPS16-202ENST00000380445 ATP10BO94823 1461 aa18.04■□□□□ 0.48
VPS16-202ENST00000380445 CHD1O14646 1710 aa18.03■□□□□ 0.48
VPS16-202ENST00000380445 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
VPS16-202ENST00000380445 ZNF644Q9H582 1327 aaPredicted RBP18.03■□□□□ 0.48
VPS16-202ENST00000380445 KIF14Q15058 1648 aa18.02■□□□□ 0.48
VPS16-202ENST00000380445 KDM6BO15054 1643 aa18■□□□□ 0.47
VPS16-202ENST00000380445 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
VPS16-202ENST00000380445 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
VPS16-202ENST00000380445 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
VPS16-202ENST00000380445 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
VPS16-202ENST00000380445 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
VPS16-202ENST00000380445 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
VPS16-202ENST00000380445 ZNF777Q9ULD5 760 aaPredicted RBP17.96■□□□□ 0.46
VPS16-202ENST00000380445 DENND4BO75064 1496 aaPredicted RBP17.96■□□□□ 0.46
VPS16-202ENST00000380445 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
VPS16-202ENST00000380445 NCOA1Q15788 1441 aa17.94■□□□□ 0.46
VPS16-202ENST00000380445 CDC42BPAQ5VT25 1732 aa17.94■□□□□ 0.46
VPS16-202ENST00000380445 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
VPS16-202ENST00000380445 ANKRD30AQ9BXX3 1397 aa17.93■□□□□ 0.46
VPS16-202ENST00000380445 SHANK2Q9UPX8 1470 aa17.9■□□□□ 0.46
VPS16-202ENST00000380445 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
VPS16-202ENST00000380445 KDM5BQ9UGL1 1544 aa17.88■□□□□ 0.45
VPS16-202ENST00000380445 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
VPS16-202ENST00000380445 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
VPS16-202ENST00000380445 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
VPS16-202ENST00000380445 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
VPS16-202ENST00000380445 ABCC2Q92887 1545 aa17.85■□□□□ 0.45
VPS16-202ENST00000380445 RSPH4AQ5TD94 716 aa17.85■□□□□ 0.45
VPS16-202ENST00000380445 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
VPS16-202ENST00000380445 ARHGEF5Q12774 1597 aa17.84■□□□□ 0.45
VPS16-202ENST00000380445 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
VPS16-202ENST00000380445 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.45
VPS16-202ENST00000380445 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
VPS16-202ENST00000380445 FOXD1Q16676 465 aa17.82■□□□□ 0.44
VPS16-202ENST00000380445 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
VPS16-202ENST00000380445 PZPP20742 1482 aa17.81■□□□□ 0.44
VPS16-202ENST00000380445 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
VPS16-202ENST00000380445 L3MBTL2Q969R5 705 aa17.8■□□□□ 0.44
VPS16-202ENST00000380445 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
VPS16-202ENST00000380445 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
VPS16-202ENST00000380445 CDC42BPBQ9Y5S2 1711 aa17.78■□□□□ 0.44
VPS16-202ENST00000380445 MBD5Q9P267 1494 aa17.78■□□□□ 0.44
VPS16-202ENST00000380445 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
VPS16-202ENST00000380445 KIAA1107Q9UPP5 1409 aa17.78■□□□□ 0.44
VPS16-202ENST00000380445 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.44
VPS16-202ENST00000380445 UHRF1BP1LA0JNW5 1464 aa17.77■□□□□ 0.44
VPS16-202ENST00000380445 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
VPS16-202ENST00000380445 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
VPS16-202ENST00000380445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.75■□□□□ 0.43
VPS16-202ENST00000380445 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
VPS16-202ENST00000380445 KIF15Q9NS87 1388 aa17.74■□□□□ 0.43
VPS16-202ENST00000380445 ANP32CO43423 234 aa17.74■□□□□ 0.43
VPS16-202ENST00000380445 PLEKHH2Q8IVE3 1493 aa17.74■□□□□ 0.43
VPS16-202ENST00000380445 ARHGAP5Q13017 1502 aa17.74■□□□□ 0.43
VPS16-202ENST00000380445 PKD2Q13563 968 aa17.73■□□□□ 0.43
VPS16-202ENST00000380445 KDM5DQ9BY66 1539 aa17.73■□□□□ 0.43
VPS16-202ENST00000380445 NUP155O75694 1391 aa17.72■□□□□ 0.43
VPS16-202ENST00000380445 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
VPS16-202ENST00000380445 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
VPS16-202ENST00000380445 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
VPS16-202ENST00000380445 CCER2I3L3R5 266 aa17.71■□□□□ 0.43
VPS16-202ENST00000380445 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
VPS16-202ENST00000380445 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
VPS16-202ENST00000380445 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
VPS16-202ENST00000380445 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
VPS16-202ENST00000380445 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
VPS16-202ENST00000380445 PLCH2O75038 1416 aa17.66■□□□□ 0.42
VPS16-202ENST00000380445 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
VPS16-202ENST00000380445 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
VPS16-202ENST00000380445 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
VPS16-202ENST00000380445 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
VPS16-202ENST00000380445 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
VPS16-202ENST00000380445 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
VPS16-202ENST00000380445 ARHGEF12Q9NZN5 1544 aa17.59■□□□□ 0.41
VPS16-202ENST00000380445 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
VPS16-202ENST00000380445 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.4
VPS16-202ENST00000380445 UNC13BO14795 1591 aa17.58■□□□□ 0.4
VPS16-202ENST00000380445 UHRF1BP1Q6BDS2 1440 aa17.57■□□□□ 0.4
VPS16-202ENST00000380445 CCDC7Q96M83 1385 aa17.57■□□□□ 0.4
VPS16-202ENST00000380445 ABCC1P33527 1531 aa17.56■□□□□ 0.4
VPS16-202ENST00000380445 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
VPS16-202ENST00000380445 ERBINQ96RT1 1412 aa17.55■□□□□ 0.4
VPS16-202ENST00000380445 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
VPS16-202ENST00000380445 WDR7Q9Y4E6 1490 aa17.54■□□□□ 0.4
VPS16-202ENST00000380445 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
VPS16-202ENST00000380445 IQGAP3Q86VI3 1631 aa17.51■□□□□ 0.39
VPS16-202ENST00000380445 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
VPS16-202ENST00000380445 RALGAPBQ86X10 1494 aa17.51■□□□□ 0.39
VPS16-202ENST00000380445 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
VPS16-202ENST00000380445 RTEL1-TNFRSF6BF6WH68 1400 aa17.5■□□□□ 0.39
VPS16-202ENST00000380445 PRKCSHP14314 528 aaPredicted RBP17.5■□□□□ 0.39
VPS16-202ENST00000380445 USP47Q96K76 1375 aa17.5■□□□□ 0.39
VPS16-202ENST00000380445 C11orf95C9JLR9 678 aaPredicted RBP17.5■□□□□ 0.39
VPS16-202ENST00000380445 ARID4BQ4LE39 1312 aaPredicted RBP17.49■□□□□ 0.39
VPS16-202ENST00000380445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms