RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 NAIPQ13075 1403 aa12.3□□□□□ -0.44
OPTN-204ENST00000378752 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
OPTN-204ENST00000378752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.441e-7■■■□□ 16.3
OPTN-204ENST00000378752 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
OPTN-204ENST00000378752 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
OPTN-204ENST00000378752 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
OPTN-204ENST00000378752 PKD2Q13563 968 aa12.28□□□□□ -0.44
OPTN-204ENST00000378752 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
OPTN-204ENST00000378752 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.44
OPTN-204ENST00000378752 ERICH6BQ5W0A0 696 aa12.27□□□□□ -0.45
OPTN-204ENST00000378752 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
OPTN-204ENST00000378752 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
OPTN-204ENST00000378752 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
OPTN-204ENST00000378752 FANCD2Q9BXW9 1451 aa12.24□□□□□ -0.45
OPTN-204ENST00000378752 RGS3P49796 1198 aa12.24□□□□□ -0.45
OPTN-204ENST00000378752 NESP48681 1621 aa12.23□□□□□ -0.45
OPTN-204ENST00000378752 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
OPTN-204ENST00000378752 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
OPTN-204ENST00000378752 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
OPTN-204ENST00000378752 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
OPTN-204ENST00000378752 PTPN23Q9H3S7 1636 aa12.2□□□□□ -0.46
OPTN-204ENST00000378752 USP47Q96K76 1375 aa12.2□□□□□ -0.46
OPTN-204ENST00000378752 PDE4AP27815 886 aa12.2□□□□□ -0.46
OPTN-204ENST00000378752 RRP1P56182 461 aaKnown RBP12.17□□□□□ -0.46
OPTN-204ENST00000378752 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
OPTN-204ENST00000378752 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
OPTN-204ENST00000378752 SENP3Q9H4L4 574 aaPredicted RBP12.15□□□□□ -0.46
OPTN-204ENST00000378752 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
OPTN-204ENST00000378752 PNISRQ8TF01 805 aaKnown RBP12.15□□□□□ -0.46
OPTN-204ENST00000378752 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
OPTN-204ENST00000378752 CDK13Q14004 1512 aaKnown RBP12.14□□□□□ -0.47
OPTN-204ENST00000378752 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
OPTN-204ENST00000378752 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
OPTN-204ENST00000378752 NCOA1Q15788 1441 aa12.13□□□□□ -0.47
OPTN-204ENST00000378752 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
OPTN-204ENST00000378752 NUP155O75694 1391 aa12.13□□□□□ -0.47
OPTN-204ENST00000378752 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
OPTN-204ENST00000378752 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
OPTN-204ENST00000378752 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
OPTN-204ENST00000378752 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
OPTN-204ENST00000378752 NEUROD2Q15784 382 aa12.1□□□□□ -0.47
OPTN-204ENST00000378752 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
OPTN-204ENST00000378752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
OPTN-204ENST00000378752 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
OPTN-204ENST00000378752 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
OPTN-204ENST00000378752 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
OPTN-204ENST00000378752 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 KDM6BO15054 1643 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
OPTN-204ENST00000378752 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.47
OPTN-204ENST00000378752 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.47
OPTN-204ENST00000378752 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
OPTN-204ENST00000378752 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
OPTN-204ENST00000378752 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.48
OPTN-204ENST00000378752 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
OPTN-204ENST00000378752 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
OPTN-204ENST00000378752 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
OPTN-204ENST00000378752 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
OPTN-204ENST00000378752 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
OPTN-204ENST00000378752 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
OPTN-204ENST00000378752 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
OPTN-204ENST00000378752 SLKQ9H2G2 1235 aaPredicted RBP12.06□□□□□ -0.48
OPTN-204ENST00000378752 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
OPTN-204ENST00000378752 PANK3Q9H999 370 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 KIF15Q9NS87 1388 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
OPTN-204ENST00000378752 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
OPTN-204ENST00000378752 FRAT1Q92837 279 aaPredicted RBP12.04□□□□□ -0.48
OPTN-204ENST00000378752 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
OPTN-204ENST00000378752 RALBP1Q15311 655 aa12.03□□□□□ -0.48
OPTN-204ENST00000378752 WDR62O43379 1518 aa12.03□□□□□ -0.48
OPTN-204ENST00000378752 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
OPTN-204ENST00000378752 NFKBIBQ15653 356 aa12.02□□□□□ -0.48
OPTN-204ENST00000378752 KNSTRNQ9Y448 316 aa12.02□□□□□ -0.49
OPTN-204ENST00000378752 MAGI3Q5TCQ9 1506 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 DAPK1P53355 1430 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
OPTN-204ENST00000378752 RPRD2Q5VT52 1461 aaKnown RBP12.01□□□□□ -0.49
OPTN-204ENST00000378752 DHX29Q7Z478 1369 aaKnown RBP12.01□□□□□ -0.49
OPTN-204ENST00000378752 EPRSP07814 1512 aaKnown RBP12□□□□□ -0.49
OPTN-204ENST00000378752 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
OPTN-204ENST00000378752 ADAMTS8Q9UP79 889 aa12□□□□□ -0.49
OPTN-204ENST00000378752 KDM5BQ9UGL1 1544 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
OPTN-204ENST00000378752 GSE1Q14687 1217 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
OPTN-204ENST00000378752 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 ABCC5O15440 1437 aa11.99□□□□□ -0.49
OPTN-204ENST00000378752 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
OPTN-204ENST00000378752 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
OPTN-204ENST00000378752 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
OPTN-204ENST00000378752 UGGT2Q9NYU1 1516 aa11.97□□□□□ -0.49
OPTN-204ENST00000378752 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
OPTN-204ENST00000378752 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms