RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
ITM2B-202ENST00000378565 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
ITM2B-202ENST00000378565 APPP05067 770 aa14.26□□□□□ -0.13
ITM2B-202ENST00000378565 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
ITM2B-202ENST00000378565 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
ITM2B-202ENST00000378565 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
ITM2B-202ENST00000378565 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
ITM2B-202ENST00000378565 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
ITM2B-202ENST00000378565 CCDC70Q6NSX1 233 aa14.22□□□□□ -0.13
ITM2B-202ENST00000378565 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.22□□□□□ -0.13
ITM2B-202ENST00000378565 RWDD1Q9H446 243 aaPredicted RBP14.22□□□□□ -0.13
ITM2B-202ENST00000378565 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
ITM2B-202ENST00000378565 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
ITM2B-202ENST00000378565 MTERF4Q7Z6M4 381 aaKnown RBP14.21□□□□□ -0.13
ITM2B-202ENST00000378565 RCAN3Q9UKA8 241 aa14.21□□□□□ -0.13
ITM2B-202ENST00000378565 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
ITM2B-202ENST00000378565 HAP1P54257 671 aaPredicted RBP14.21□□□□□ -0.14
ITM2B-202ENST00000378565 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.14
ITM2B-202ENST00000378565 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.14
ITM2B-202ENST00000378565 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
ITM2B-202ENST00000378565 KIF16BQ96L93 1317 aa14.19□□□□□ -0.14
ITM2B-202ENST00000378565 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
ITM2B-202ENST00000378565 EEA1Q15075 1411 aa14.19□□□□□ -0.14
ITM2B-202ENST00000378565 MFAP1P55081 439 aaKnown RBP14.17□□□□□ -0.14
ITM2B-202ENST00000378565 ST18O60284 1047 aa14.17□□□□□ -0.14
ITM2B-202ENST00000378565 CCAR2Q8N163 923 aaKnown RBP14.17□□□□□ -0.14
ITM2B-202ENST00000378565 PMFBP1Q8TBY8 1022 aa14.17□□□□□ -0.14
ITM2B-202ENST00000378565 MAP7D2Q96T17 732 aa14.17□□□□□ -0.14
ITM2B-202ENST00000378565 RGL3Q3MIN7 710 aa14.16□□□□□ -0.14
ITM2B-202ENST00000378565 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
ITM2B-202ENST00000378565 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
ITM2B-202ENST00000378565 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
ITM2B-202ENST00000378565 RRP12Q5JTH9 1297 aaKnown RBP14.15□□□□□ -0.14
ITM2B-202ENST00000378565 NPHP1O15259 732 aa14.15□□□□□ -0.14
ITM2B-202ENST00000378565 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
ITM2B-202ENST00000378565 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
ITM2B-202ENST00000378565 GOLGA6L19H0YKK7 550 aa14.14□□□□□ -0.15
ITM2B-202ENST00000378565 TSR1Q2NL82 804 aaKnown RBP14.14□□□□□ -0.15
ITM2B-202ENST00000378565 GPATCH3Q96I76 525 aa14.14□□□□□ -0.15
ITM2B-202ENST00000378565 FAM43AQ8N2R8 423 aa14.13□□□□□ -0.15
ITM2B-202ENST00000378565 ITPRIPQ8IWB1 547 aa14.13□□□□□ -0.15
ITM2B-202ENST00000378565 ABCC9O60706 1549 aa14.13□□□□□ -0.15
ITM2B-202ENST00000378565 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
ITM2B-202ENST00000378565 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
ITM2B-202ENST00000378565 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
ITM2B-202ENST00000378565 FANCIQ9NVI1 1328 aa14.12□□□□□ -0.15
ITM2B-202ENST00000378565 CCDC66A2RUB6 948 aa14.12□□□□□ -0.15
ITM2B-202ENST00000378565 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
ITM2B-202ENST00000378565 TPM1P09493 284 aa14.11□□□□□ -0.15
ITM2B-202ENST00000378565 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
ITM2B-202ENST00000378565 PRM3Q9NNZ6 103 aa14.11□□□□□ -0.15
ITM2B-202ENST00000378565 KIF3AQ9Y496 699 aa14.11□□□□□ -0.15
ITM2B-202ENST00000378565 DDX49Q9Y6V7 483 aaKnown RBP14.1□□□□□ -0.15
ITM2B-202ENST00000378565 APBB1O00213 710 aa14.1□□□□□ -0.15
ITM2B-202ENST00000378565 TMF1P82094 1093 aa14.1□□□□□ -0.15
ITM2B-202ENST00000378565 ZNF592Q92610 1267 aa14.09□□□□□ -0.15
ITM2B-202ENST00000378565 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
ITM2B-202ENST00000378565 PDE4CQ08493 712 aa14.08□□□□□ -0.15
ITM2B-202ENST00000378565 CREBRFQ8IUR6 639 aa14.08□□□□□ -0.15
ITM2B-202ENST00000378565 ISY1Q9ULR0 285 aaKnown RBP14.08□□□□□ -0.16
ITM2B-202ENST00000378565 RASSF8Q8NHQ8 419 aa14.07□□□□□ -0.16
ITM2B-202ENST00000378565 AK7Q96M32 723 aa14.07□□□□□ -0.16
ITM2B-202ENST00000378565 ACBD3Q9H3P7 528 aa14.07□□□□□ -0.16
ITM2B-202ENST00000378565 BECN2A8MW95 431 aa14.07□□□□□ -0.16
ITM2B-202ENST00000378565 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
ITM2B-202ENST00000378565 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
ITM2B-202ENST00000378565 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
ITM2B-202ENST00000378565 HSP90B2PQ58FF3 399 aa14.05□□□□□ -0.16
ITM2B-202ENST00000378565 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
ITM2B-202ENST00000378565 HMMRO75330 724 aa14.05□□□□□ -0.16
ITM2B-202ENST00000378565 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
ITM2B-202ENST00000378565 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
ITM2B-202ENST00000378565 RUFY1Q96T51 708 aa14.04□□□□□ -0.16
ITM2B-202ENST00000378565 TPD52L1Q16890 204 aaPredicted RBP14.04□□□□□ -0.16
ITM2B-202ENST00000378565 RALBP1Q15311 655 aa14.04□□□□□ -0.16
ITM2B-202ENST00000378565 FAM161AQ3B820 660 aa14.04□□□□□ -0.16
ITM2B-202ENST00000378565 PES1O00541 588 aaKnown RBP14.04□□□□□ -0.16
ITM2B-202ENST00000378565 POGKQ9P215 609 aa14.04□□□□□ -0.16
ITM2B-202ENST00000378565 TPM2P07951 284 aa14.04□□□□□ -0.16
ITM2B-202ENST00000378565 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
ITM2B-202ENST00000378565 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
ITM2B-202ENST00000378565 IPO7O95373 1038 aaKnown RBP14.03□□□□□ -0.16
ITM2B-202ENST00000378565 SF3A1Q15459 793 aaKnown RBP14.03□□□□□ -0.16
ITM2B-202ENST00000378565 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
ITM2B-202ENST00000378565 CDR1P51861 262 aa14.02□□□□□ -0.16
ITM2B-202ENST00000378565 HOMER1Q86YM7 354 aa14.02□□□□□ -0.16
ITM2B-202ENST00000378565 H0YHG0 523 aa14.02□□□□□ -0.16
ITM2B-202ENST00000378565 MORC1Q86VD1 984 aa14.02□□□□□ -0.17
ITM2B-202ENST00000378565 RTF1Q92541 710 aaKnown RBP14.01□□□□□ -0.17
ITM2B-202ENST00000378565 DIAPH3Q9NSV4 1193 aa14.01□□□□□ -0.17
ITM2B-202ENST00000378565 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
ITM2B-202ENST00000378565 H3BQV1 296 aa14.01□□□□□ -0.17
ITM2B-202ENST00000378565 IFFO2Q5TF58 517 aa14.01□□□□□ -0.17
ITM2B-202ENST00000378565 DCTN1Q14203 1278 aa14.01□□□□□ -0.17
ITM2B-202ENST00000378565 NOL8Q76FK4 1167 aaKnown RBP14□□□□□ -0.17
ITM2B-202ENST00000378565 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
ITM2B-202ENST00000378565 FOXD4L5Q5VV16 416 aaPredicted RBP14□□□□□ -0.17
ITM2B-202ENST00000378565 FOXD4L4Q8WXT5 416 aaPredicted RBP14□□□□□ -0.17
ITM2B-202ENST00000378565 PDE4AP27815 886 aa13.99□□□□□ -0.17
ITM2B-202ENST00000378565 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms