RNA–Protein interactions for RNA: ENST00000378560.8

TCF7-202, Transcript of transcription factor 7, humanhuman

TSL 1 (best) BASIC

Gene TCF7, Length 2,929 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF7-202ENST00000378560 FMN1Q68DA7 1419 aa13.03□□□□□ -0.32
TCF7-202ENST00000378560 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
TCF7-202ENST00000378560 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
TCF7-202ENST00000378560 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.33
TCF7-202ENST00000378560 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.33
TCF7-202ENST00000378560 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
TCF7-202ENST00000378560 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
TCF7-202ENST00000378560 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
TCF7-202ENST00000378560 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
TCF7-202ENST00000378560 NAIPQ13075 1403 aa13□□□□□ -0.33
TCF7-202ENST00000378560 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
TCF7-202ENST00000378560 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
TCF7-202ENST00000378560 ADAMTS12P58397 1594 aa12.96□□□□□ -0.33
TCF7-202ENST00000378560 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
TCF7-202ENST00000378560 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
TCF7-202ENST00000378560 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
TCF7-202ENST00000378560 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
TCF7-202ENST00000378560 NCOA2Q15596 1464 aa12.96□□□□□ -0.33
TCF7-202ENST00000378560 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
TCF7-202ENST00000378560 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
TCF7-202ENST00000378560 SAMD9Q5K651 1589 aa12.93□□□□□ -0.34
TCF7-202ENST00000378560 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
TCF7-202ENST00000378560 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
TCF7-202ENST00000378560 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
TCF7-202ENST00000378560 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
TCF7-202ENST00000378560 HNRNPUQ00839 825 aaKnown RBP eCLIP12.91□□□□□ -0.34
TCF7-202ENST00000378560 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
TCF7-202ENST00000378560 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.34
TCF7-202ENST00000378560 ARHGEF11O15085 1522 aa12.89□□□□□ -0.35
TCF7-202ENST00000378560 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
TCF7-202ENST00000378560 BRD2P25440 801 aaKnown RBP12.89□□□□□ -0.35
TCF7-202ENST00000378560 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
TCF7-202ENST00000378560 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
TCF7-202ENST00000378560 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
TCF7-202ENST00000378560 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
TCF7-202ENST00000378560 MAGI3Q5TCQ9 1506 aa12.87□□□□□ -0.35
TCF7-202ENST00000378560 CHIC2Q9UKJ5 165 aa12.87□□□□□ -0.35
TCF7-202ENST00000378560 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
TCF7-202ENST00000378560 MSH5O43196 834 aa12.85□□□□□ -0.35
TCF7-202ENST00000378560 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
TCF7-202ENST00000378560 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
TCF7-202ENST00000378560 CCDC184Q52MB2 194 aa12.84□□□□□ -0.35
TCF7-202ENST00000378560 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
TCF7-202ENST00000378560 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
TCF7-202ENST00000378560 MPHOSPH9Q99550 1183 aa12.83□□□□□ -0.36
TCF7-202ENST00000378560 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
TCF7-202ENST00000378560 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
TCF7-202ENST00000378560 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
TCF7-202ENST00000378560 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
TCF7-202ENST00000378560 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
TCF7-202ENST00000378560 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
TCF7-202ENST00000378560 KDM6BO15054 1643 aa12.82□□□□□ -0.36
TCF7-202ENST00000378560 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
TCF7-202ENST00000378560 DISP1Q96F81 1524 aa12.81□□□□□ -0.36
TCF7-202ENST00000378560 HECW1Q76N89 1606 aa12.81□□□□□ -0.36
TCF7-202ENST00000378560 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
TCF7-202ENST00000378560 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
TCF7-202ENST00000378560 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
TCF7-202ENST00000378560 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
TCF7-202ENST00000378560 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
TCF7-202ENST00000378560 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
TCF7-202ENST00000378560 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
TCF7-202ENST00000378560 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
TCF7-202ENST00000378560 FOXD1Q16676 465 aa12.78□□□□□ -0.36
TCF7-202ENST00000378560 MIA2Q96PC5 1412 aa12.78□□□□□ -0.36
TCF7-202ENST00000378560 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
TCF7-202ENST00000378560 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.36
TCF7-202ENST00000378560 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.37
TCF7-202ENST00000378560 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
TCF7-202ENST00000378560 KIAA0556O60303 1618 aa12.76□□□□□ -0.37
TCF7-202ENST00000378560 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
TCF7-202ENST00000378560 ARID3AQ99856 593 aa12.76□□□□□ -0.37
TCF7-202ENST00000378560 PLB1Q6P1J6 1458 aa12.75□□□□□ -0.37
TCF7-202ENST00000378560 FAM9BQ8IZU0 186 aa12.75□□□□□ -0.37
TCF7-202ENST00000378560 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
TCF7-202ENST00000378560 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
TCF7-202ENST00000378560 RPRD2Q5VT52 1461 aaKnown RBP12.74□□□□□ -0.37
TCF7-202ENST00000378560 ZBED9Q6R2W3 1325 aa12.73□□□□□ -0.37
TCF7-202ENST00000378560 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
TCF7-202ENST00000378560 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
TCF7-202ENST00000378560 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
TCF7-202ENST00000378560 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
TCF7-202ENST00000378560 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
TCF7-202ENST00000378560 TEX14Q8IWB6 1497 aa12.72□□□□□ -0.37
TCF7-202ENST00000378560 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
TCF7-202ENST00000378560 NUP160Q12769 1436 aa12.72□□□□□ -0.37
TCF7-202ENST00000378560 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
TCF7-202ENST00000378560 NBR1Q14596 966 aa12.71□□□□□ -0.37
TCF7-202ENST00000378560 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
TCF7-202ENST00000378560 DAPK1P53355 1430 aa12.7□□□□□ -0.38
TCF7-202ENST00000378560 ABCC5O15440 1437 aa12.7□□□□□ -0.38
TCF7-202ENST00000378560 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
TCF7-202ENST00000378560 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
TCF7-202ENST00000378560 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
TCF7-202ENST00000378560 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
TCF7-202ENST00000378560 POLR3GLQ9BT43 218 aa12.68□□□□□ -0.38
TCF7-202ENST00000378560 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
TCF7-202ENST00000378560 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
TCF7-202ENST00000378560 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
TCF7-202ENST00000378560 DNMT1P26358 1616 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms