RNA–Protein interactions for RNA: ENST00000378378.8

ARHGEF16-203, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF16, Length 3,061 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-203ENST00000378378 ZNF644Q9H582 1327 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF16-203ENST00000378378 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
ARHGEF16-203ENST00000378378 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
ARHGEF16-203ENST00000378378 NCOA2Q15596 1464 aa20.57■□□□□ 0.88
ARHGEF16-203ENST00000378378 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
ARHGEF16-203ENST00000378378 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
ARHGEF16-203ENST00000378378 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF16-203ENST00000378378 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
ARHGEF16-203ENST00000378378 UACAQ9BZF9 1416 aa20.53■□□□□ 0.88
ARHGEF16-203ENST00000378378 CNTLNQ9NXG0 1405 aa20.52■□□□□ 0.88
ARHGEF16-203ENST00000378378 KDM5BQ9UGL1 1544 aa20.52■□□□□ 0.87
ARHGEF16-203ENST00000378378 ZNF777Q9ULD5 760 aaPredicted RBP20.51■□□□□ 0.87
ARHGEF16-203ENST00000378378 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
ARHGEF16-203ENST00000378378 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
ARHGEF16-203ENST00000378378 NBPF8Q3BBV2 869 aa20.5■□□□□ 0.87
ARHGEF16-203ENST00000378378 MYOM3Q5VTT5 1437 aa20.49■□□□□ 0.87
ARHGEF16-203ENST00000378378 SKAP1Q86WV1 359 aa20.49■□□□□ 0.87
ARHGEF16-203ENST00000378378 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
ARHGEF16-203ENST00000378378 CCDC7Q96M83 1385 aa20.49■□□□□ 0.87
ARHGEF16-203ENST00000378378 NAIPQ13075 1403 aa20.48■□□□□ 0.87
ARHGEF16-203ENST00000378378 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
ARHGEF16-203ENST00000378378 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
ARHGEF16-203ENST00000378378 LRRIQ1Q96JM4 1722 aa20.47■□□□□ 0.87
ARHGEF16-203ENST00000378378 NEFMP07197 916 aa20.46■□□□□ 0.87
ARHGEF16-203ENST00000378378 KIF7Q2M1P5 1343 aa20.45■□□□□ 0.86
ARHGEF16-203ENST00000378378 HFM1A2PYH4 1435 aa20.44■□□□□ 0.86
ARHGEF16-203ENST00000378378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.44■□□□□ 0.863e-6■■■□□ 16.9
ARHGEF16-203ENST00000378378 IQGAP2Q13576 1575 aa20.43■□□□□ 0.86
ARHGEF16-203ENST00000378378 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
ARHGEF16-203ENST00000378378 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
ARHGEF16-203ENST00000378378 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
ARHGEF16-203ENST00000378378 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
ARHGEF16-203ENST00000378378 EPRSP07814 1512 aaKnown RBP20.4■□□□□ 0.86
ARHGEF16-203ENST00000378378 EXOC6Q8TAG9 804 aa20.39■□□□□ 0.85
ARHGEF16-203ENST00000378378 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
ARHGEF16-203ENST00000378378 IFT140Q96RY7 1462 aa20.38■□□□□ 0.85
ARHGEF16-203ENST00000378378 KDM6BO15054 1643 aa20.36■□□□□ 0.85
ARHGEF16-203ENST00000378378 BRPF3Q9ULD4 1205 aa20.36■□□□□ 0.85
ARHGEF16-203ENST00000378378 SLC4A3P48751 1232 aa20.35■□□□□ 0.85
ARHGEF16-203ENST00000378378 DENND4BO75064 1496 aaPredicted RBP20.35■□□□□ 0.85
ARHGEF16-203ENST00000378378 SUPT6HQ7KZ85 1726 aaKnown RBP20.35■□□□□ 0.85
ARHGEF16-203ENST00000378378 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
ARHGEF16-203ENST00000378378 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
ARHGEF16-203ENST00000378378 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
ARHGEF16-203ENST00000378378 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.85
ARHGEF16-203ENST00000378378 JPH4Q96JJ6 628 aa20.33■□□□□ 0.84
ARHGEF16-203ENST00000378378 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
ARHGEF16-203ENST00000378378 PDE4AP27815 886 aa20.31■□□□□ 0.84
ARHGEF16-203ENST00000378378 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
ARHGEF16-203ENST00000378378 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
ARHGEF16-203ENST00000378378 KIAA0586Q9BVV6 1533 aa20.29■□□□□ 0.84
ARHGEF16-203ENST00000378378 CFDP1Q9UEE9 299 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF16-203ENST00000378378 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
ARHGEF16-203ENST00000378378 PLIN1O60240 522 aa20.28■□□□□ 0.84
ARHGEF16-203ENST00000378378 DISP1Q96F81 1524 aa20.28■□□□□ 0.84
ARHGEF16-203ENST00000378378 PRG4Q92954 1404 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF16-203ENST00000378378 EIF5BO60841 1220 aaKnown RBP20.28■□□□□ 0.84
ARHGEF16-203ENST00000378378 WDR62O43379 1518 aa20.27■□□□□ 0.84
ARHGEF16-203ENST00000378378 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.84
ARHGEF16-203ENST00000378378 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
ARHGEF16-203ENST00000378378 EIF4G3O43432 1585 aaKnown RBP20.26■□□□□ 0.83
ARHGEF16-203ENST00000378378 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
ARHGEF16-203ENST00000378378 NUP153P49790 1475 aaKnown RBP20.24■□□□□ 0.83
ARHGEF16-203ENST00000378378 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
ARHGEF16-203ENST00000378378 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
ARHGEF16-203ENST00000378378 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
ARHGEF16-203ENST00000378378 DHX29Q7Z478 1369 aaKnown RBP20.2■□□□□ 0.82
ARHGEF16-203ENST00000378378 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
ARHGEF16-203ENST00000378378 CDCA7LQ96GN5 454 aa20.19■□□□□ 0.82
ARHGEF16-203ENST00000378378 BACH2Q9BYV9 841 aa20.19■□□□□ 0.82
ARHGEF16-203ENST00000378378 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
ARHGEF16-203ENST00000378378 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
ARHGEF16-203ENST00000378378 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
ARHGEF16-203ENST00000378378 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
ARHGEF16-203ENST00000378378 ABCC5O15440 1437 aa20.14■□□□□ 0.81
ARHGEF16-203ENST00000378378 MIA2Q96PC5 1412 aa20.14■□□□□ 0.81
ARHGEF16-203ENST00000378378 DAPK1P53355 1430 aa20.14■□□□□ 0.81
ARHGEF16-203ENST00000378378 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
ARHGEF16-203ENST00000378378 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
ARHGEF16-203ENST00000378378 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
ARHGEF16-203ENST00000378378 TCOF1Q13428 1488 aaKnown RBP20.13■□□□□ 0.81
ARHGEF16-203ENST00000378378 FRAT1Q92837 279 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF16-203ENST00000378378 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
ARHGEF16-203ENST00000378378 NFKBIBQ15653 356 aa20.11■□□□□ 0.81
ARHGEF16-203ENST00000378378 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
ARHGEF16-203ENST00000378378 USP47Q96K76 1375 aa20.09■□□□□ 0.81
ARHGEF16-203ENST00000378378 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF16-203ENST00000378378 RAPGEF6Q8TEU7 1601 aa20.09■□□□□ 0.81
ARHGEF16-203ENST00000378378 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARHGEF16-203ENST00000378378 GSE1Q14687 1217 aa20.09■□□□□ 0.81
ARHGEF16-203ENST00000378378 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
ARHGEF16-203ENST00000378378 PKD2Q13563 968 aa20.08■□□□□ 0.81
ARHGEF16-203ENST00000378378 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.8
ARHGEF16-203ENST00000378378 CRBNQ96SW2 442 aa20.08■□□□□ 0.8
ARHGEF16-203ENST00000378378 TROQ12816 1431 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF16-203ENST00000378378 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
ARHGEF16-203ENST00000378378 BCORL1Q5H9F3 1711 aa20.05■□□□□ 0.8
ARHGEF16-203ENST00000378378 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
ARHGEF16-203ENST00000378378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■□□□ 11.7
ARHGEF16-203ENST00000378378 RPRD2Q5VT52 1461 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms