RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
SF1-204ENST00000377390 PDE4AP27815 886 aa16.12■□□□□ 0.17
SF1-204ENST00000377390 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
SF1-204ENST00000377390 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
SF1-204ENST00000377390 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
SF1-204ENST00000377390 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
SF1-204ENST00000377390 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
SF1-204ENST00000377390 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
SF1-204ENST00000377390 PKNOX2Q96KN3 472 aa16.1■□□□□ 0.17
SF1-204ENST00000377390 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
SF1-204ENST00000377390 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
SF1-204ENST00000377390 PLIN1O60240 522 aa16.09■□□□□ 0.17
SF1-204ENST00000377390 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
SF1-204ENST00000377390 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
SF1-204ENST00000377390 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
SF1-204ENST00000377390 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
SF1-204ENST00000377390 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
SF1-204ENST00000377390 ARID4BQ4LE39 1312 aaPredicted RBP16.06■□□□□ 0.16
SF1-204ENST00000377390 CNTLNQ9NXG0 1405 aa16.05■□□□□ 0.16
SF1-204ENST00000377390 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
SF1-204ENST00000377390 TSPY4P0CV99 314 aa16.04■□□□□ 0.16
SF1-204ENST00000377390 TSPY10P0CW01 314 aa16.04■□□□□ 0.16
SF1-204ENST00000377390 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
SF1-204ENST00000377390 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
SF1-204ENST00000377390 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
SF1-204ENST00000377390 GSE1Q14687 1217 aa16.03■□□□□ 0.16
SF1-204ENST00000377390 RGS3P49796 1198 aa16.03■□□□□ 0.16
SF1-204ENST00000377390 GLIPR1L2Q4G1C9 344 aa16.02■□□□□ 0.16
SF1-204ENST00000377390 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
SF1-204ENST00000377390 FMN1Q68DA7 1419 aa16.01■□□□□ 0.15
SF1-204ENST00000377390 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
SF1-204ENST00000377390 FGD6Q6ZV73 1430 aa15.99■□□□□ 0.15
SF1-204ENST00000377390 PKD2Q13563 968 aa15.99■□□□□ 0.15
SF1-204ENST00000377390 RRP1P56182 461 aaKnown RBP15.98■□□□□ 0.15
SF1-204ENST00000377390 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
SF1-204ENST00000377390 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
SF1-204ENST00000377390 NUTM2DQ5VT03 806 aaPredicted RBP15.96■□□□□ 0.15
SF1-204ENST00000377390 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
SF1-204ENST00000377390 NFKBIBQ15653 356 aa15.96■□□□□ 0.15
SF1-204ENST00000377390 CARD11Q9BXL7 1154 aa15.96■□□□□ 0.15
SF1-204ENST00000377390 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
SF1-204ENST00000377390 USP35Q9P2H5 1018 aa15.95■□□□□ 0.14
SF1-204ENST00000377390 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
SF1-204ENST00000377390 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
SF1-204ENST00000377390 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
SF1-204ENST00000377390 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
SF1-204ENST00000377390 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
SF1-204ENST00000377390 PNISRQ8TF01 805 aaKnown RBP15.91■□□□□ 0.14
SF1-204ENST00000377390 CRBNQ96SW2 442 aa15.91■□□□□ 0.14
SF1-204ENST00000377390 SMG6Q86US8 1419 aaKnown RBP15.91■□□□□ 0.14
SF1-204ENST00000377390 PCF11O94913 1555 aaKnown RBP15.9■□□□□ 0.14
SF1-204ENST00000377390 NAIPQ13075 1403 aa15.9■□□□□ 0.14
SF1-204ENST00000377390 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
SF1-204ENST00000377390 BIVM-ERCC5R4GMW8 1640 aa15.89■□□□□ 0.13
SF1-204ENST00000377390 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
SF1-204ENST00000377390 RSPH6AQ9H0K4 717 aa15.88■□□□□ 0.13
SF1-204ENST00000377390 HFM1A2PYH4 1435 aa15.88■□□□□ 0.13
SF1-204ENST00000377390 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
SF1-204ENST00000377390 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
SF1-204ENST00000377390 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
SF1-204ENST00000377390 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
SF1-204ENST00000377390 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
SF1-204ENST00000377390 ST20-MTHFSA0A0A6YYL1 179 aa15.85■□□□□ 0.13
SF1-204ENST00000377390 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
SF1-204ENST00000377390 MLECQ14165 292 aa15.84■□□□□ 0.13
SF1-204ENST00000377390 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
SF1-204ENST00000377390 ZMYND15Q9H091 742 aa15.84■□□□□ 0.13
SF1-204ENST00000377390 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.13
SF1-204ENST00000377390 NUP155O75694 1391 aa15.83■□□□□ 0.12
SF1-204ENST00000377390 TNNT2P45379 298 aaPredicted RBP15.82■□□□□ 0.12
SF1-204ENST00000377390 USP47Q96K76 1375 aa15.82■□□□□ 0.12
SF1-204ENST00000377390 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
SF1-204ENST00000377390 NCOA1Q15788 1441 aa15.82■□□□□ 0.12
SF1-204ENST00000377390 GGT6Q6P531 493 aa15.81■□□□□ 0.12
SF1-204ENST00000377390 MS4A1P11836 297 aa15.81■□□□□ 0.12
SF1-204ENST00000377390 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
SF1-204ENST00000377390 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
SF1-204ENST00000377390 GZF1Q9H116 711 aaPredicted RBP15.8■□□□□ 0.12
SF1-204ENST00000377390 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
SF1-204ENST00000377390 MYOM3Q5VTT5 1437 aa15.79■□□□□ 0.12
SF1-204ENST00000377390 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
SF1-204ENST00000377390 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
SF1-204ENST00000377390 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
SF1-204ENST00000377390 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
SF1-204ENST00000377390 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
SF1-204ENST00000377390 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
SF1-204ENST00000377390 WASHC2CQ9Y4E1 1318 aa15.76■□□□□ 0.11
SF1-204ENST00000377390 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
SF1-204ENST00000377390 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
SF1-204ENST00000377390 NLRP13Q86W25 1043 aa15.74■□□□□ 0.11
SF1-204ENST00000377390 MRC2Q9UBG0 1479 aa15.74■□□□□ 0.11
SF1-204ENST00000377390 HSP90AA1P07900 732 aaKnown RBP15.74■□□□□ 0.11
SF1-204ENST00000377390 RALBP1Q15311 655 aa15.74■□□□□ 0.11
SF1-204ENST00000377390 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
SF1-204ENST00000377390 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
SF1-204ENST00000377390 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
SF1-204ENST00000377390 ARID3AQ99856 593 aa15.74■□□□□ 0.11
SF1-204ENST00000377390 PTPRGP23470 1445 aa15.73■□□□□ 0.11
SF1-204ENST00000377390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.73■□□□□ 0.11
SF1-204ENST00000377390 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms