RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
UBQLN1-202ENST00000376395 NUP155O75694 1391 aa19.56■□□□□ 0.72
UBQLN1-202ENST00000376395 FANCIQ9NVI1 1328 aa19.55■□□□□ 0.72
UBQLN1-202ENST00000376395 CASKIN1Q8WXD9 1431 aa19.55■□□□□ 0.72
UBQLN1-202ENST00000376395 RCAN3Q9UKA8 241 aa19.55■□□□□ 0.72
UBQLN1-202ENST00000376395 NEUROD2Q15784 382 aa19.54■□□□□ 0.72
UBQLN1-202ENST00000376395 NESP48681 1621 aa19.53■□□□□ 0.72
UBQLN1-202ENST00000376395 EXOC6Q8TAG9 804 aa19.53■□□□□ 0.72
UBQLN1-202ENST00000376395 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
UBQLN1-202ENST00000376395 HNRNPMP52272 730 aaKnown RBP eCLIP19.51■□□□□ 0.714e-6■■■□□ 15.8
UBQLN1-202ENST00000376395 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
UBQLN1-202ENST00000376395 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
UBQLN1-202ENST00000376395 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.49■□□□□ 0.71
UBQLN1-202ENST00000376395 IPO9Q96P70 1041 aaKnown RBP19.49■□□□□ 0.71
UBQLN1-202ENST00000376395 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
UBQLN1-202ENST00000376395 KNSTRNQ9Y448 316 aa19.49■□□□□ 0.71
UBQLN1-202ENST00000376395 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
UBQLN1-202ENST00000376395 USP47Q96K76 1375 aa19.48■□□□□ 0.71
UBQLN1-202ENST00000376395 NAIPQ13075 1403 aa19.48■□□□□ 0.71
UBQLN1-202ENST00000376395 PCF11O94913 1555 aaKnown RBP19.48■□□□□ 0.71
UBQLN1-202ENST00000376395 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
UBQLN1-202ENST00000376395 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
UBQLN1-202ENST00000376395 PTPRKQ15262 1439 aa19.45■□□□□ 0.7
UBQLN1-202ENST00000376395 SLC4A3P48751 1232 aa19.45■□□□□ 0.7
UBQLN1-202ENST00000376395 FYCO1Q9BQS8 1478 aa19.45■□□□□ 0.7
UBQLN1-202ENST00000376395 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
UBQLN1-202ENST00000376395 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
UBQLN1-202ENST00000376395 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
UBQLN1-202ENST00000376395 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
UBQLN1-202ENST00000376395 FRAT1Q92837 279 aaPredicted RBP19.4■□□□□ 0.7
UBQLN1-202ENST00000376395 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.696e-7■■■□□ 18.2
UBQLN1-202ENST00000376395 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
UBQLN1-202ENST00000376395 UPF2Q9HAU5 1272 aaKnown RBP19.39■□□□□ 0.69
UBQLN1-202ENST00000376395 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
UBQLN1-202ENST00000376395 KTN1Q86UP2 1357 aaKnown RBP19.38■□□□□ 0.69
UBQLN1-202ENST00000376395 RRP1P56182 461 aaKnown RBP19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 PDE4AP27815 886 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 RALBP1Q15311 655 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 NLRP13Q86W25 1043 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 SKAP1Q86WV1 359 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 TMF1P82094 1093 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
UBQLN1-202ENST00000376395 PANK3Q9H999 370 aa19.34■□□□□ 0.69
UBQLN1-202ENST00000376395 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
UBQLN1-202ENST00000376395 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
UBQLN1-202ENST00000376395 PPM1GO15355 546 aaPredicted RBP19.33■□□□□ 0.68
UBQLN1-202ENST00000376395 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.68
UBQLN1-202ENST00000376395 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
UBQLN1-202ENST00000376395 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
UBQLN1-202ENST00000376395 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
UBQLN1-202ENST00000376395 KIF15Q9NS87 1388 aa19.29■□□□□ 0.68
UBQLN1-202ENST00000376395 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
UBQLN1-202ENST00000376395 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
UBQLN1-202ENST00000376395 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
UBQLN1-202ENST00000376395 SPRYD3Q8NCJ5 442 aa19.27■□□□□ 0.68
UBQLN1-202ENST00000376395 NBPF1Q3BBV0 1214 aa19.27■□□□□ 0.68
UBQLN1-202ENST00000376395 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
UBQLN1-202ENST00000376395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.25■□□□□ 0.679e-7■■■□□ 16.5
UBQLN1-202ENST00000376395 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
UBQLN1-202ENST00000376395 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
UBQLN1-202ENST00000376395 EFCAB5A4FU69 1503 aa19.22■□□□□ 0.67
UBQLN1-202ENST00000376395 SLKQ9H2G2 1235 aaPredicted RBP19.22■□□□□ 0.67
UBQLN1-202ENST00000376395 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
UBQLN1-202ENST00000376395 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
UBQLN1-202ENST00000376395 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
UBQLN1-202ENST00000376395 CDCA8Q53HL2 280 aa19.19■□□□□ 0.66
UBQLN1-202ENST00000376395 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
UBQLN1-202ENST00000376395 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
UBQLN1-202ENST00000376395 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
UBQLN1-202ENST00000376395 GOLGA2Q08379 1002 aa19.17■□□□□ 0.66
UBQLN1-202ENST00000376395 RRP7AQ9Y3A4 280 aaKnown RBP19.17■□□□□ 0.66
UBQLN1-202ENST00000376395 ANKRD50Q9ULJ7 1429 aa19.17■□□□□ 0.66
UBQLN1-202ENST00000376395 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
UBQLN1-202ENST00000376395 BECN1Q14457 450 aa19.16■□□□□ 0.66
UBQLN1-202ENST00000376395 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
UBQLN1-202ENST00000376395 PDE3BQ13370 1112 aa19.16■□□□□ 0.66
UBQLN1-202ENST00000376395 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
UBQLN1-202ENST00000376395 ADAMTS8Q9UP79 889 aa19.15■□□□□ 0.66
UBQLN1-202ENST00000376395 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
UBQLN1-202ENST00000376395 EHBP1L1Q8N3D4 1523 aa19.14■□□□□ 0.66
UBQLN1-202ENST00000376395 IL27Q8NEV9 243 aa19.14■□□□□ 0.65
UBQLN1-202ENST00000376395 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.65
UBQLN1-202ENST00000376395 APAF1O14727 1248 aa19.14■□□□□ 0.65
UBQLN1-202ENST00000376395 CCDC144AA2RUR9 1427 aa19.13■□□□□ 0.65
UBQLN1-202ENST00000376395 CARMIL2Q6F5E8 1435 aa19.13■□□□□ 0.65
UBQLN1-202ENST00000376395 DAPK1P53355 1430 aa19.13■□□□□ 0.65
UBQLN1-202ENST00000376395 EPRSP07814 1512 aaKnown RBP19.13■□□□□ 0.65
UBQLN1-202ENST00000376395 STAG3Q9UJ98 1225 aa19.12■□□□□ 0.65
UBQLN1-202ENST00000376395 SMG6Q86US8 1419 aaKnown RBP19.11■□□□□ 0.65
UBQLN1-202ENST00000376395 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
UBQLN1-202ENST00000376395 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
UBQLN1-202ENST00000376395 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
UBQLN1-202ENST00000376395 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
UBQLN1-202ENST00000376395 NUTM2DQ5VT03 806 aaPredicted RBP19.1■□□□□ 0.65
UBQLN1-202ENST00000376395 MORC1Q86VD1 984 aa19.08■□□□□ 0.64
UBQLN1-202ENST00000376395 ABCC5O15440 1437 aa19.08■□□□□ 0.64
UBQLN1-202ENST00000376395 C20orf194Q5TEA3 1177 aa19.07■□□□□ 0.64
UBQLN1-202ENST00000376395 MIA2Q96PC5 1412 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms