RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 SETD1BQ9UPS6 1966 aaKnown RBP17.87■□□□□ 0.45
HLA-DRA-201ENST00000374982 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
HLA-DRA-201ENST00000374982 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
HLA-DRA-201ENST00000374982 RAPGEF6Q8TEU7 1601 aa17.81■□□□□ 0.44
HLA-DRA-201ENST00000374982 UBAP1LF5GYI3 381 aa17.81■□□□□ 0.44
HLA-DRA-201ENST00000374982 C3P01024 1663 aa17.79■□□□□ 0.44
HLA-DRA-201ENST00000374982 NCOA1Q15788 1441 aa17.77■□□□□ 0.44
HLA-DRA-201ENST00000374982 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.44
HLA-DRA-201ENST00000374982 ATP10AO60312 1499 aa17.76■□□□□ 0.43
HLA-DRA-201ENST00000374982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
HLA-DRA-201ENST00000374982 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
HLA-DRA-201ENST00000374982 FAM9AQ8IZU1 332 aaPredicted RBP17.75■□□□□ 0.43
HLA-DRA-201ENST00000374982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.75■□□□□ 0.43
HLA-DRA-201ENST00000374982 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
HLA-DRA-201ENST00000374982 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
HLA-DRA-201ENST00000374982 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
HLA-DRA-201ENST00000374982 HSPA1LP34931 641 aa17.7■□□□□ 0.42
HLA-DRA-201ENST00000374982 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
HLA-DRA-201ENST00000374982 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
HLA-DRA-201ENST00000374982 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
HLA-DRA-201ENST00000374982 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
HLA-DRA-201ENST00000374982 TRAPPC8Q9Y2L5 1435 aa17.65■□□□□ 0.42
HLA-DRA-201ENST00000374982 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
HLA-DRA-201ENST00000374982 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
HLA-DRA-201ENST00000374982 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
HLA-DRA-201ENST00000374982 NCKAP5LQ9HCH0 1330 aa17.6■□□□□ 0.41
HLA-DRA-201ENST00000374982 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
HLA-DRA-201ENST00000374982 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
HLA-DRA-201ENST00000374982 REREQ9P2R6 1566 aa17.59■□□□□ 0.41
HLA-DRA-201ENST00000374982 PRXQ9BXM0 1461 aa17.58■□□□□ 0.41
HLA-DRA-201ENST00000374982 KDM5CP41229 1560 aa17.57■□□□□ 0.4
HLA-DRA-201ENST00000374982 PLCH2O75038 1416 aa17.56■□□□□ 0.4
HLA-DRA-201ENST00000374982 MYO5CQ9NQX4 1742 aa17.56■□□□□ 0.4
HLA-DRA-201ENST00000374982 ABCA6Q8N139 1617 aa17.56■□□□□ 0.4
HLA-DRA-201ENST00000374982 ZNF142P52746 1687 aaPredicted RBP17.55■□□□□ 0.4
HLA-DRA-201ENST00000374982 AGLP35573 1532 aa17.55■□□□□ 0.4
HLA-DRA-201ENST00000374982 ZNF518AQ6AHZ1 1483 aa17.55■□□□□ 0.4
HLA-DRA-201ENST00000374982 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
HLA-DRA-201ENST00000374982 MROH2AA6NES4 1674 aa17.52■□□□□ 0.4
HLA-DRA-201ENST00000374982 PLA2R1Q13018 1463 aa17.52■□□□□ 0.4
HLA-DRA-201ENST00000374982 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
HLA-DRA-201ENST00000374982 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
HLA-DRA-201ENST00000374982 TOM1O60784 492 aa17.51■□□□□ 0.39
HLA-DRA-201ENST00000374982 NPATQ14207 1427 aa17.51■□□□□ 0.39
HLA-DRA-201ENST00000374982 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
HLA-DRA-201ENST00000374982 PKD2Q13563 968 aa17.5■□□□□ 0.39
HLA-DRA-201ENST00000374982 ALKQ9UM73 1620 aa17.48■□□□□ 0.39
HLA-DRA-201ENST00000374982 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
HLA-DRA-201ENST00000374982 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
HLA-DRA-201ENST00000374982 CEP170BQ9Y4F5 1589 aaPredicted RBP17.47■□□□□ 0.39
HLA-DRA-201ENST00000374982 CPS1P31327 1500 aa17.47■□□□□ 0.39
HLA-DRA-201ENST00000374982 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
HLA-DRA-201ENST00000374982 EFCAB2Q5VUJ9 269 aa17.46■□□□□ 0.39
HLA-DRA-201ENST00000374982 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
HLA-DRA-201ENST00000374982 RGS17Q9UGC6 210 aaPredicted RBP17.45■□□□□ 0.38
HLA-DRA-201ENST00000374982 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
HLA-DRA-201ENST00000374982 POLR1AO95602 1720 aaPredicted RBP17.42■□□□□ 0.38
HLA-DRA-201ENST00000374982 ARHGAP5Q13017 1502 aa17.41■□□□□ 0.38
HLA-DRA-201ENST00000374982 KIF14Q15058 1648 aa17.4■□□□□ 0.38
HLA-DRA-201ENST00000374982 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
HLA-DRA-201ENST00000374982 CLTCQ00610 1675 aaKnown RBP17.4■□□□□ 0.38
HLA-DRA-201ENST00000374982 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
HLA-DRA-201ENST00000374982 SHANK2Q9UPX8 1470 aa17.39■□□□□ 0.37
HLA-DRA-201ENST00000374982 KIDINS220Q9ULH0 1771 aa17.39■□□□□ 0.37
HLA-DRA-201ENST00000374982 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
HLA-DRA-201ENST00000374982 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
HLA-DRA-201ENST00000374982 NEURL4Q96JN8 1562 aa17.36■□□□□ 0.37
HLA-DRA-201ENST00000374982 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
HLA-DRA-201ENST00000374982 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
HLA-DRA-201ENST00000374982 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
HLA-DRA-201ENST00000374982 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
HLA-DRA-201ENST00000374982 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
HLA-DRA-201ENST00000374982 ABCC1P33527 1531 aa17.31■□□□□ 0.36
HLA-DRA-201ENST00000374982 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
HLA-DRA-201ENST00000374982 A2ML1A8K2U0 1454 aa17.3■□□□□ 0.36
HLA-DRA-201ENST00000374982 RNF17Q9BXT8 1623 aaKnown RBP17.29■□□□□ 0.36
HLA-DRA-201ENST00000374982 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
HLA-DRA-201ENST00000374982 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
HLA-DRA-201ENST00000374982 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
HLA-DRA-201ENST00000374982 SYNMO15061 1565 aa17.22■□□□□ 0.35
HLA-DRA-201ENST00000374982 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
HLA-DRA-201ENST00000374982 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.34
HLA-DRA-201ENST00000374982 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
HLA-DRA-201ENST00000374982 LRRIQ1Q96JM4 1722 aa17.18■□□□□ 0.34
HLA-DRA-201ENST00000374982 DEPDC5O75140 1603 aa17.18■□□□□ 0.34
HLA-DRA-201ENST00000374982 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
HLA-DRA-201ENST00000374982 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
HLA-DRA-201ENST00000374982 CLIP1P30622 1438 aa17.18■□□□□ 0.34
HLA-DRA-201ENST00000374982 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
HLA-DRA-201ENST00000374982 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
HLA-DRA-201ENST00000374982 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
HLA-DRA-201ENST00000374982 MED14O60244 1454 aa17.16■□□□□ 0.34
HLA-DRA-201ENST00000374982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-DRA-201ENST00000374982 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
HLA-DRA-201ENST00000374982 ATP7AQ04656 1500 aa17.14■□□□□ 0.33
HLA-DRA-201ENST00000374982 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
HLA-DRA-201ENST00000374982 GGT6Q6P531 493 aa17.13■□□□□ 0.33
HLA-DRA-201ENST00000374982 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
HLA-DRA-201ENST00000374982 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
HLA-DRA-201ENST00000374982 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms