RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 UHRF1BP1Q6BDS2 1440 aa16.12■□□□□ 0.17
HLA-DOA-202ENST00000374813 CEBPAP49715 358 aaPredicted RBP16.12■□□□□ 0.17
HLA-DOA-202ENST00000374813 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
HLA-DOA-202ENST00000374813 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
HLA-DOA-202ENST00000374813 ARHGEF12Q9NZN5 1544 aa16.09■□□□□ 0.17
HLA-DOA-202ENST00000374813 SIGLEC1Q9BZZ2 1709 aa16.09■□□□□ 0.17
HLA-DOA-202ENST00000374813 ATP10AO60312 1499 aa16.09■□□□□ 0.17
HLA-DOA-202ENST00000374813 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
HLA-DOA-202ENST00000374813 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
HLA-DOA-202ENST00000374813 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
HLA-DOA-202ENST00000374813 SCAPERQ9BY12 1400 aa16.05■□□□□ 0.16
HLA-DOA-202ENST00000374813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
HLA-DOA-202ENST00000374813 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
HLA-DOA-202ENST00000374813 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
HLA-DOA-202ENST00000374813 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
HLA-DOA-202ENST00000374813 UBAP1LF5GYI3 381 aa16■□□□□ 0.15
HLA-DOA-202ENST00000374813 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
HLA-DOA-202ENST00000374813 PLCH2O75038 1416 aa15.99■□□□□ 0.15
HLA-DOA-202ENST00000374813 TRAPPC8Q9Y2L5 1435 aa15.96■□□□□ 0.15
HLA-DOA-202ENST00000374813 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
HLA-DOA-202ENST00000374813 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
HLA-DOA-202ENST00000374813 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
HLA-DOA-202ENST00000374813 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
HLA-DOA-202ENST00000374813 AFAP1Q8N556 730 aa15.91■□□□□ 0.14
HLA-DOA-202ENST00000374813 C3P01024 1663 aa15.91■□□□□ 0.14
HLA-DOA-202ENST00000374813 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
HLA-DOA-202ENST00000374813 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
HLA-DOA-202ENST00000374813 ZNF335Q9H4Z2 1342 aaPredicted RBP15.88■□□□□ 0.13
HLA-DOA-202ENST00000374813 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
HLA-DOA-202ENST00000374813 PKD2Q13563 968 aa15.87■□□□□ 0.13
HLA-DOA-202ENST00000374813 REREQ9P2R6 1566 aa15.87■□□□□ 0.13
HLA-DOA-202ENST00000374813 NCKAP5LQ9HCH0 1330 aa15.86■□□□□ 0.13
HLA-DOA-202ENST00000374813 CAMSAP1Q5T5Y3 1602 aa15.86■□□□□ 0.13
HLA-DOA-202ENST00000374813 AGLP35573 1532 aa15.85■□□□□ 0.13
HLA-DOA-202ENST00000374813 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
HLA-DOA-202ENST00000374813 KDM5CP41229 1560 aa15.84■□□□□ 0.13
HLA-DOA-202ENST00000374813 TOM1O60784 492 aa15.84■□□□□ 0.13
HLA-DOA-202ENST00000374813 NPATQ14207 1427 aa15.84■□□□□ 0.13
HLA-DOA-202ENST00000374813 HSPA1LP34931 641 aa15.83■□□□□ 0.12
HLA-DOA-202ENST00000374813 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
HLA-DOA-202ENST00000374813 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
HLA-DOA-202ENST00000374813 MLH3Q9UHC1 1453 aa15.83■□□□□ 0.12
HLA-DOA-202ENST00000374813 MED1Q15648 1581 aaPredicted RBP15.82■□□□□ 0.12
HLA-DOA-202ENST00000374813 DIP2CQ9Y2E4 1556 aa15.82■□□□□ 0.12
HLA-DOA-202ENST00000374813 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
HLA-DOA-202ENST00000374813 PIP4K2BP78356 416 aa15.8■□□□□ 0.12
HLA-DOA-202ENST00000374813 ARHGAP5Q13017 1502 aa15.79■□□□□ 0.12
HLA-DOA-202ENST00000374813 ZMYM3Q14202 1370 aa15.79■□□□□ 0.12
HLA-DOA-202ENST00000374813 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
HLA-DOA-202ENST00000374813 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
HLA-DOA-202ENST00000374813 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
HLA-DOA-202ENST00000374813 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
HLA-DOA-202ENST00000374813 MROH2AA6NES4 1674 aa15.75■□□□□ 0.11
HLA-DOA-202ENST00000374813 TCOF1Q13428 1488 aaKnown RBP15.73■□□□□ 0.11
HLA-DOA-202ENST00000374813 KIF14Q15058 1648 aa15.73■□□□□ 0.11
HLA-DOA-202ENST00000374813 CLIP1P30622 1438 aa15.73■□□□□ 0.11
HLA-DOA-202ENST00000374813 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
HLA-DOA-202ENST00000374813 TROQ12816 1431 aaPredicted RBP15.71■□□□□ 0.11
HLA-DOA-202ENST00000374813 FMN1Q68DA7 1419 aa15.71■□□□□ 0.11
HLA-DOA-202ENST00000374813 CPS1P31327 1500 aa15.69■□□□□ 0.1
HLA-DOA-202ENST00000374813 ZNF142P52746 1687 aaPredicted RBP15.69■□□□□ 0.1
HLA-DOA-202ENST00000374813 EEA1Q15075 1411 aa15.68■□□□□ 0.1
HLA-DOA-202ENST00000374813 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
HLA-DOA-202ENST00000374813 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
HLA-DOA-202ENST00000374813 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
HLA-DOA-202ENST00000374813 CEP170BQ9Y4F5 1589 aaPredicted RBP15.67■□□□□ 0.1
HLA-DOA-202ENST00000374813 MYO3AQ8NEV4 1616 aa15.65■□□□□ 0.1
HLA-DOA-202ENST00000374813 SHANK2Q9UPX8 1470 aa15.65■□□□□ 0.1
HLA-DOA-202ENST00000374813 ABCC1P33527 1531 aa15.64■□□□□ 0.09
HLA-DOA-202ENST00000374813 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
HLA-DOA-202ENST00000374813 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
HLA-DOA-202ENST00000374813 GGT6Q6P531 493 aa15.62■□□□□ 0.09
HLA-DOA-202ENST00000374813 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
HLA-DOA-202ENST00000374813 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
HLA-DOA-202ENST00000374813 ANKLE2Q86XL3 938 aa15.6■□□□□ 0.09
HLA-DOA-202ENST00000374813 PREX2Q70Z35 1606 aa15.6■□□□□ 0.09
HLA-DOA-202ENST00000374813 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.09
HLA-DOA-202ENST00000374813 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.09
HLA-DOA-202ENST00000374813 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
HLA-DOA-202ENST00000374813 THEMISQ8N1K5 641 aaPredicted RBP15.57■□□□□ 0.08
HLA-DOA-202ENST00000374813 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
HLA-DOA-202ENST00000374813 RGS17Q9UGC6 210 aaPredicted RBP15.56■□□□□ 0.08
HLA-DOA-202ENST00000374813 POLR1AO95602 1720 aaPredicted RBP15.56■□□□□ 0.08
HLA-DOA-202ENST00000374813 A2MP01023 1474 aa15.55■□□□□ 0.08
HLA-DOA-202ENST00000374813 HNRNPMP52272 730 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-DOA-202ENST00000374813 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-202ENST00000374813 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.08
HLA-DOA-202ENST00000374813 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
HLA-DOA-202ENST00000374813 NEURL4Q96JN8 1562 aa15.52■□□□□ 0.07
HLA-DOA-202ENST00000374813 ATP7AQ04656 1500 aa15.52■□□□□ 0.07
HLA-DOA-202ENST00000374813 CDC42BPAQ5VT25 1732 aa15.51■□□□□ 0.07
HLA-DOA-202ENST00000374813 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
HLA-DOA-202ENST00000374813 TNRQ92752 1358 aa15.5■□□□□ 0.07
HLA-DOA-202ENST00000374813 ALKQ9UM73 1620 aa15.5■□□□□ 0.07
HLA-DOA-202ENST00000374813 VWDEQ8N2E2 1590 aa15.5■□□□□ 0.07
HLA-DOA-202ENST00000374813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
HLA-DOA-202ENST00000374813 MED14O60244 1454 aa15.49■□□□□ 0.07
HLA-DOA-202ENST00000374813 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
HLA-DOA-202ENST00000374813 PLEKHH2Q8IVE3 1493 aa15.49■□□□□ 0.07
HLA-DOA-202ENST00000374813 NPHP4O75161 1426 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms