RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
ABCA1-201ENST00000374733 ATF5Q9Y2D1 282 aaPredicted RBP19.07■□□□□ 0.64
ABCA1-201ENST00000374733 RAPGEF3O95398 923 aa19.05■□□□□ 0.64
ABCA1-201ENST00000374733 FRMPD1Q5SYB0 1578 aa19.04■□□□□ 0.64
ABCA1-201ENST00000374733 SUPT5HO00267 1087 aaKnown RBP19.03■□□□□ 0.64
ABCA1-201ENST00000374733 ABCA8O94911 1581 aa19.01■□□□□ 0.63
ABCA1-201ENST00000374733 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
ABCA1-201ENST00000374733 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
ABCA1-201ENST00000374733 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
ABCA1-201ENST00000374733 FER1L4A9Z1Z3 1794 aa18.94■□□□□ 0.62
ABCA1-201ENST00000374733 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
ABCA1-201ENST00000374733 PREX1Q8TCU6 1659 aa18.92■□□□□ 0.62
ABCA1-201ENST00000374733 NEO1Q92859 1461 aa18.92■□□□□ 0.62
ABCA1-201ENST00000374733 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
ABCA1-201ENST00000374733 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
ABCA1-201ENST00000374733 FANCAO15360 1455 aa18.9■□□□□ 0.62
ABCA1-201ENST00000374733 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.62
ABCA1-201ENST00000374733 POGZQ7Z3K3 1410 aa18.89■□□□□ 0.61
ABCA1-201ENST00000374733 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
ABCA1-201ENST00000374733 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
ABCA1-201ENST00000374733 YEATS2Q9ULM3 1422 aa18.88■□□□□ 0.61
ABCA1-201ENST00000374733 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
ABCA1-201ENST00000374733 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
ABCA1-201ENST00000374733 MLECQ14165 292 aa18.84■□□□□ 0.61
ABCA1-201ENST00000374733 DSG3P32926 999 aa18.82■□□□□ 0.6
ABCA1-201ENST00000374733 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
ABCA1-201ENST00000374733 DENND4BO75064 1496 aaPredicted RBP18.81■□□□□ 0.6
ABCA1-201ENST00000374733 ATP10BO94823 1461 aa18.81■□□□□ 0.6
ABCA1-201ENST00000374733 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
ABCA1-201ENST00000374733 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
ABCA1-201ENST00000374733 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
ABCA1-201ENST00000374733 ZMYM4Q5VZL5 1548 aa18.76■□□□□ 0.59
ABCA1-201ENST00000374733 IQSEC2Q5JU85 1478 aa18.76■□□□□ 0.59
ABCA1-201ENST00000374733 POLA2Q14181 598 aa18.75■□□□□ 0.59
ABCA1-201ENST00000374733 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
ABCA1-201ENST00000374733 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
ABCA1-201ENST00000374733 ABCB7O75027 752 aa18.73■□□□□ 0.59
ABCA1-201ENST00000374733 CEBPAP49715 358 aaPredicted RBP18.73■□□□□ 0.59
ABCA1-201ENST00000374733 ARHGEF12Q9NZN5 1544 aa18.73■□□□□ 0.59
ABCA1-201ENST00000374733 PTPRTO14522 1441 aa18.73■□□□□ 0.59
ABCA1-201ENST00000374733 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
ABCA1-201ENST00000374733 MED1Q15648 1581 aaPredicted RBP18.69■□□□□ 0.58
ABCA1-201ENST00000374733 HECW1Q76N89 1606 aa18.68■□□□□ 0.58
ABCA1-201ENST00000374733 SETD1BQ9UPS6 1966 aaKnown RBP18.66■□□□□ 0.58
ABCA1-201ENST00000374733 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
ABCA1-201ENST00000374733 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
ABCA1-201ENST00000374733 UBAP1LF5GYI3 381 aa18.64■□□□□ 0.57
ABCA1-201ENST00000374733 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
ABCA1-201ENST00000374733 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
ABCA1-201ENST00000374733 C9orf84Q5VXU9 1444 aa18.59■□□□□ 0.57
ABCA1-201ENST00000374733 C3P01024 1663 aa18.59■□□□□ 0.57
ABCA1-201ENST00000374733 ATP10AO60312 1499 aa18.58■□□□□ 0.56
ABCA1-201ENST00000374733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.56
ABCA1-201ENST00000374733 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
ABCA1-201ENST00000374733 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
ABCA1-201ENST00000374733 NUP153P49790 1475 aaKnown RBP18.53■□□□□ 0.56
ABCA1-201ENST00000374733 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
ABCA1-201ENST00000374733 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
ABCA1-201ENST00000374733 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
ABCA1-201ENST00000374733 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
ABCA1-201ENST00000374733 HSPA1LP34931 641 aa18.49■□□□□ 0.55
ABCA1-201ENST00000374733 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
ABCA1-201ENST00000374733 TRAPPC8Q9Y2L5 1435 aa18.45■□□□□ 0.54
ABCA1-201ENST00000374733 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
ABCA1-201ENST00000374733 NCKAP5LQ9HCH0 1330 aa18.42■□□□□ 0.54
ABCA1-201ENST00000374733 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
ABCA1-201ENST00000374733 DIP2CQ9Y2E4 1556 aa18.41■□□□□ 0.54
ABCA1-201ENST00000374733 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
ABCA1-201ENST00000374733 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.53
ABCA1-201ENST00000374733 MYO5CQ9NQX4 1742 aa18.38■□□□□ 0.53
ABCA1-201ENST00000374733 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
ABCA1-201ENST00000374733 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
ABCA1-201ENST00000374733 PLCH2O75038 1416 aa18.37■□□□□ 0.53
ABCA1-201ENST00000374733 ZNF518AQ6AHZ1 1483 aa18.37■□□□□ 0.53
ABCA1-201ENST00000374733 KDM5CP41229 1560 aa18.37■□□□□ 0.53
ABCA1-201ENST00000374733 REREQ9P2R6 1566 aa18.37■□□□□ 0.53
ABCA1-201ENST00000374733 ZNF142P52746 1687 aaPredicted RBP18.33■□□□□ 0.52
ABCA1-201ENST00000374733 AGLP35573 1532 aa18.33■□□□□ 0.52
ABCA1-201ENST00000374733 MYO3AQ8NEV4 1616 aa18.32■□□□□ 0.52
ABCA1-201ENST00000374733 CDK13Q14004 1512 aaKnown RBP18.32■□□□□ 0.52
ABCA1-201ENST00000374733 TOM1O60784 492 aa18.31■□□□□ 0.52
ABCA1-201ENST00000374733 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
ABCA1-201ENST00000374733 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
ABCA1-201ENST00000374733 PLA2R1Q13018 1463 aa18.3■□□□□ 0.52
ABCA1-201ENST00000374733 MROH2AA6NES4 1674 aa18.3■□□□□ 0.52
ABCA1-201ENST00000374733 CNTLNQ9NXG0 1405 aa18.3■□□□□ 0.52
ABCA1-201ENST00000374733 TCOF1Q13428 1488 aaKnown RBP18.29■□□□□ 0.52
ABCA1-201ENST00000374733 NPATQ14207 1427 aa18.29■□□□□ 0.52
ABCA1-201ENST00000374733 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
ABCA1-201ENST00000374733 CEP170BQ9Y4F5 1589 aaPredicted RBP18.27■□□□□ 0.52
ABCA1-201ENST00000374733 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
ABCA1-201ENST00000374733 PKD2Q13563 968 aa18.27■□□□□ 0.52
ABCA1-201ENST00000374733 ARHGAP5Q13017 1502 aa18.25■□□□□ 0.51
ABCA1-201ENST00000374733 CPS1P31327 1500 aa18.24■□□□□ 0.51
ABCA1-201ENST00000374733 KIF14Q15058 1648 aa18.23■□□□□ 0.51
ABCA1-201ENST00000374733 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
ABCA1-201ENST00000374733 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
ABCA1-201ENST00000374733 CLTCQ00610 1675 aaKnown RBP18.21■□□□□ 0.51
ABCA1-201ENST00000374733 POLR1AO95602 1720 aaPredicted RBP18.2■□□□□ 0.5
ABCA1-201ENST00000374733 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms