RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 CALD1Q05682 793 aaKnown RBP6.86□□□□□ -1.31
A1CF-205ENST00000374001 FHOD3Q2V2M9 1422 aa6.85□□□□□ -1.31
A1CF-205ENST00000374001 LRRC9Q6ZRR7 1453 aa6.85□□□□□ -1.31
A1CF-205ENST00000374001 NGEFQ8N5V2 710 aa6.85□□□□□ -1.31
A1CF-205ENST00000374001 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
A1CF-205ENST00000374001 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
A1CF-205ENST00000374001 PLEKHH2Q8IVE3 1493 aa6.84□□□□□ -1.31
A1CF-205ENST00000374001 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
A1CF-205ENST00000374001 NUP155O75694 1391 aa6.84□□□□□ -1.31
A1CF-205ENST00000374001 MAPK8IP3Q9UPT6 1336 aa6.84□□□□□ -1.31
A1CF-205ENST00000374001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.84□□□□□ -1.31
A1CF-205ENST00000374001 TIAM1Q13009 1591 aa6.84□□□□□ -1.31
A1CF-205ENST00000374001 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
A1CF-205ENST00000374001 THOC2Q8NI27 1593 aaKnown RBP6.83□□□□□ -1.32
A1CF-205ENST00000374001 AQRO60306 1485 aaKnown RBP eCLIP6.83□□□□□ -1.324e-7■■■□□ 15.4
A1CF-205ENST00000374001 ITSN2Q9NZM3 1697 aa6.83□□□□□ -1.32
A1CF-205ENST00000374001 MPHOSPH9Q99550 1183 aa6.83□□□□□ -1.32
A1CF-205ENST00000374001 IGF1RP08069 1367 aa6.83□□□□□ -1.32
A1CF-205ENST00000374001 NPM2Q86SE8 214 aaKnown RBP6.83□□□□□ -1.32
A1CF-205ENST00000374001 FGD6Q6ZV73 1430 aa6.83□□□□□ -1.32
A1CF-205ENST00000374001 FTSJ3Q8IY81 847 aaKnown RBP6.83□□□□□ -1.32
A1CF-205ENST00000374001 PRXQ9BXM0 1461 aa6.83□□□□□ -1.32
A1CF-205ENST00000374001 CCDC144AA2RUR9 1427 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 TOPBP1Q92547 1522 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 POGKQ9P215 609 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 MIA2Q96PC5 1412 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 PDE3BQ13370 1112 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 DCAF11Q8TEB1 546 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 SCAPERQ9BY12 1400 aa6.82□□□□□ -1.32
A1CF-205ENST00000374001 IQGAP2Q13576 1575 aa6.81□□□□□ -1.32
A1CF-205ENST00000374001 KAT6BQ8WYB5 2073 aa6.81□□□□□ -1.32
A1CF-205ENST00000374001 RGL3Q3MIN7 710 aa6.81□□□□□ -1.32
A1CF-205ENST00000374001 SYNJ2O15056 1496 aa6.81□□□□□ -1.32
A1CF-205ENST00000374001 ABCA10Q8WWZ4 1543 aa6.81□□□□□ -1.32
A1CF-205ENST00000374001 RRBP1Q9P2E9 1410 aaKnown RBP6.81□□□□□ -1.32
A1CF-205ENST00000374001 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
A1CF-205ENST00000374001 JPH4Q96JJ6 628 aa6.81□□□□□ -1.32
A1CF-205ENST00000374001 PKD2Q13563 968 aa6.8□□□□□ -1.32
A1CF-205ENST00000374001 PTPRGP23470 1445 aa6.8□□□□□ -1.32
A1CF-205ENST00000374001 KANK4Q5T7N3 995 aaPredicted RBP6.8□□□□□ -1.32
A1CF-205ENST00000374001 KIF15Q9NS87 1388 aa6.8□□□□□ -1.32
A1CF-205ENST00000374001 SPAG9O60271 1321 aaKnown RBP6.79□□□□□ -1.32
A1CF-205ENST00000374001 HDAC5Q9UQL6 1122 aa6.79□□□□□ -1.32
A1CF-205ENST00000374001 IPO8O15397 1037 aaKnown RBP6.79□□□□□ -1.32
A1CF-205ENST00000374001 GLIPR1L2Q4G1C9 344 aa6.79□□□□□ -1.32
A1CF-205ENST00000374001 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
A1CF-205ENST00000374001 RUSC2Q8N2Y8 1516 aa6.78□□□□□ -1.32
A1CF-205ENST00000374001 WDR97A6NE52 1622 aa6.78□□□□□ -1.32
A1CF-205ENST00000374001 NCLP19338 710 aaKnown RBP6.78□□□□□ -1.32
A1CF-205ENST00000374001 PTMSP20962 102 aa6.78□□□□□ -1.32
A1CF-205ENST00000374001 NLRP13Q86W25 1043 aa6.78□□□□□ -1.32
A1CF-205ENST00000374001 SCAF1Q9H7N4 1312 aaKnown RBP6.77□□□□□ -1.32
A1CF-205ENST00000374001 POLA1P09884 1462 aaPredicted RBP6.77□□□□□ -1.33
A1CF-205ENST00000374001 SIN3AQ96ST3 1273 aa6.77□□□□□ -1.33
A1CF-205ENST00000374001 HDGFL2Q7Z4V5 671 aaPredicted RBP6.77□□□□□ -1.33
A1CF-205ENST00000374001 TERF2IPQ9NYB0 399 aa6.77□□□□□ -1.33
A1CF-205ENST00000374001 MAGI1Q96QZ7 1491 aaPredicted RBP6.77□□□□□ -1.33
A1CF-205ENST00000374001 NCOA2Q15596 1464 aa6.77□□□□□ -1.33
A1CF-205ENST00000374001 KIF14Q15058 1648 aa6.76□□□□□ -1.33
A1CF-205ENST00000374001 C14orf37Q86TY3 774 aa6.76□□□□□ -1.33
A1CF-205ENST00000374001 HFM1A2PYH4 1435 aa6.75□□□□□ -1.33
A1CF-205ENST00000374001 LMOD3Q0VAK6 560 aa6.75□□□□□ -1.33
A1CF-205ENST00000374001 AAMPQ13685 434 aa6.75□□□□□ -1.33
A1CF-205ENST00000374001 HSPA5P11021 654 aaKnown RBP6.74□□□□□ -1.33
A1CF-205ENST00000374001 MORC1Q86VD1 984 aa6.74□□□□□ -1.33
A1CF-205ENST00000374001 SUPT16HQ9Y5B9 1047 aaKnown RBP6.74□□□□□ -1.33
A1CF-205ENST00000374001 CFAP43Q8NDM7 1665 aa6.74□□□□□ -1.33
A1CF-205ENST00000374001 RAD54L2Q9Y4B4 1467 aa6.74□□□□□ -1.33
A1CF-205ENST00000374001 PTPN23Q9H3S7 1636 aa6.74□□□□□ -1.33
A1CF-205ENST00000374001 SALL2Q9Y467 1007 aaPredicted RBP6.74□□□□□ -1.33
A1CF-205ENST00000374001 WASHC2AQ641Q2 1341 aa6.73□□□□□ -1.33
A1CF-205ENST00000374001 WASHC2CQ9Y4E1 1318 aa6.73□□□□□ -1.33
A1CF-205ENST00000374001 ARAP1Q96P48 1450 aa6.73□□□□□ -1.33
A1CF-205ENST00000374001 KIAA0586Q9BVV6 1533 aa6.73□□□□□ -1.33
A1CF-205ENST00000374001 ARHGAP5Q13017 1502 aa6.73□□□□□ -1.33
A1CF-205ENST00000374001 NESP48681 1621 aa6.73□□□□□ -1.33
A1CF-205ENST00000374001 ROCK1Q13464 1354 aa6.72□□□□□ -1.33
A1CF-205ENST00000374001 MYBBP1AQ9BQG0 1328 aaKnown RBP6.72□□□□□ -1.33
A1CF-205ENST00000374001 VGFO15240 615 aaPredicted RBP6.72□□□□□ -1.33
A1CF-205ENST00000374001 USP47Q96K76 1375 aa6.72□□□□□ -1.33
A1CF-205ENST00000374001 ZBED9Q6R2W3 1325 aa6.72□□□□□ -1.33
A1CF-205ENST00000374001 SRPK2P78362 688 aaKnown RBP6.72□□□□□ -1.33
A1CF-205ENST00000374001 HIRIP3Q9BW71 556 aaPredicted RBP6.72□□□□□ -1.33
A1CF-205ENST00000374001 CNTLNQ9NXG0 1405 aa6.72□□□□□ -1.33
A1CF-205ENST00000374001 TROQ12816 1431 aaPredicted RBP6.72□□□□□ -1.33
A1CF-205ENST00000374001 ANKRD50Q9ULJ7 1429 aa6.72□□□□□ -1.33
A1CF-205ENST00000374001 TCERG1O14776 1098 aaKnown RBP6.72□□□□□ -1.33
A1CF-205ENST00000374001 MCCP23508 829 aa6.72□□□□□ -1.33
A1CF-205ENST00000374001 L3MBTL2Q969R5 705 aa6.71□□□□□ -1.33
A1CF-205ENST00000374001 PCF11O94913 1555 aaKnown RBP6.71□□□□□ -1.34
A1CF-205ENST00000374001 EID1Q9Y6B2 187 aa6.71□□□□□ -1.34
A1CF-205ENST00000374001 CGNL1Q0VF96 1302 aa6.71□□□□□ -1.34
A1CF-205ENST00000374001 TRIM44Q96DX7 344 aaPredicted RBP6.71□□□□□ -1.34
A1CF-205ENST00000374001 ZRSR1Q15695 479 aaKnown RBP6.7□□□□□ -1.34
A1CF-205ENST00000374001 PMFBP1Q8TBY8 1022 aa6.7□□□□□ -1.34
A1CF-205ENST00000374001 CCDC141Q6ZP82 1450 aa6.7□□□□□ -1.34
A1CF-205ENST00000374001 RCAN3Q9UKA8 241 aa6.7□□□□□ -1.34
A1CF-205ENST00000374001 PBRM1Q86U86 1689 aa6.7□□□□□ -1.34
A1CF-205ENST00000374001 EVC2Q86UK5 1308 aa6.7□□□□□ -1.34
A1CF-205ENST00000374001 RTF1Q92541 710 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms