RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 RAPGEF6Q8TEU7 1601 aa13.49□□□□□ -0.25
CSMD2-203ENST00000373377 HSPA5P11021 654 aaKnown RBP13.49□□□□□ -0.25
CSMD2-203ENST00000373377 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
CSMD2-203ENST00000373377 MTUS2Q5JR59 1369 aa13.49□□□□□ -0.25
CSMD2-203ENST00000373377 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
CSMD2-203ENST00000373377 NUP160Q12769 1436 aa13.48□□□□□ -0.25
CSMD2-203ENST00000373377 MRS2Q9HD23 443 aa13.48□□□□□ -0.25
CSMD2-203ENST00000373377 ADCY10Q96PN6 1610 aa13.47□□□□□ -0.25
CSMD2-203ENST00000373377 MYOM3Q5VTT5 1437 aa13.46□□□□□ -0.25
CSMD2-203ENST00000373377 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.25
CSMD2-203ENST00000373377 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
CSMD2-203ENST00000373377 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
CSMD2-203ENST00000373377 NUP153P49790 1475 aaKnown RBP13.44□□□□□ -0.26
CSMD2-203ENST00000373377 ZNF326Q5BKZ1 582 aaKnown RBP13.43□□□□□ -0.26
CSMD2-203ENST00000373377 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
CSMD2-203ENST00000373377 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
CSMD2-203ENST00000373377 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
CSMD2-203ENST00000373377 CHD1O14646 1710 aa13.39□□□□□ -0.27
CSMD2-203ENST00000373377 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
CSMD2-203ENST00000373377 ABCA8O94911 1581 aa13.39□□□□□ -0.27
CSMD2-203ENST00000373377 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
CSMD2-203ENST00000373377 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
CSMD2-203ENST00000373377 CROCC2H7BZ55 1655 aa13.38□□□□□ -0.27
CSMD2-203ENST00000373377 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
CSMD2-203ENST00000373377 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
CSMD2-203ENST00000373377 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
CSMD2-203ENST00000373377 L3MBTL2Q969R5 705 aa13.37□□□□□ -0.27
CSMD2-203ENST00000373377 MIA2Q96PC5 1412 aa13.36□□□□□ -0.27
CSMD2-203ENST00000373377 KDM6BO15054 1643 aa13.36□□□□□ -0.27
CSMD2-203ENST00000373377 NAIPQ13075 1403 aa13.35□□□□□ -0.27
CSMD2-203ENST00000373377 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
CSMD2-203ENST00000373377 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
CSMD2-203ENST00000373377 DENND4BO75064 1496 aaPredicted RBP13.34□□□□□ -0.27
CSMD2-203ENST00000373377 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
CSMD2-203ENST00000373377 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
CSMD2-203ENST00000373377 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
CSMD2-203ENST00000373377 KIF14Q15058 1648 aa13.33□□□□□ -0.28
CSMD2-203ENST00000373377 KDM5BQ9UGL1 1544 aa13.33□□□□□ -0.28
CSMD2-203ENST00000373377 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
CSMD2-203ENST00000373377 CCDC136Q96JN2 1154 aa13.32□□□□□ -0.28
CSMD2-203ENST00000373377 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
CSMD2-203ENST00000373377 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
CSMD2-203ENST00000373377 MPHOSPH9Q99550 1183 aa13.31□□□□□ -0.28
CSMD2-203ENST00000373377 PLB1Q6P1J6 1458 aa13.3□□□□□ -0.28
CSMD2-203ENST00000373377 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
CSMD2-203ENST00000373377 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
CSMD2-203ENST00000373377 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
CSMD2-203ENST00000373377 TROQ12816 1431 aaPredicted RBP13.25□□□□□ -0.29
CSMD2-203ENST00000373377 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
CSMD2-203ENST00000373377 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
CSMD2-203ENST00000373377 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
CSMD2-203ENST00000373377 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
CSMD2-203ENST00000373377 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
CSMD2-203ENST00000373377 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
CSMD2-203ENST00000373377 DAPK1P53355 1430 aa13.24□□□□□ -0.29
CSMD2-203ENST00000373377 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
CSMD2-203ENST00000373377 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
CSMD2-203ENST00000373377 ROCK1Q13464 1354 aa13.23□□□□□ -0.29
CSMD2-203ENST00000373377 ZNF777Q9ULD5 760 aaPredicted RBP13.22□□□□□ -0.29
CSMD2-203ENST00000373377 GPATCH8Q9UKJ3 1502 aaKnown RBP13.22□□□□□ -0.29
CSMD2-203ENST00000373377 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
CSMD2-203ENST00000373377 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
CSMD2-203ENST00000373377 ABCC5O15440 1437 aa13.22□□□□□ -0.29
CSMD2-203ENST00000373377 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
CSMD2-203ENST00000373377 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
CSMD2-203ENST00000373377 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.29
CSMD2-203ENST00000373377 ADGRL2O95490 1459 aa13.21□□□□□ -0.29
CSMD2-203ENST00000373377 ERICH6BQ5W0A0 696 aa13.2□□□□□ -0.3
CSMD2-203ENST00000373377 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
CSMD2-203ENST00000373377 CDC42BPBQ9Y5S2 1711 aa13.2□□□□□ -0.3
CSMD2-203ENST00000373377 ATP10BO94823 1461 aa13.2□□□□□ -0.3
CSMD2-203ENST00000373377 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
CSMD2-203ENST00000373377 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
CSMD2-203ENST00000373377 KDM2AQ9Y2K7 1162 aa13.19□□□□□ -0.3
CSMD2-203ENST00000373377 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
CSMD2-203ENST00000373377 PREX2Q70Z35 1606 aa13.19□□□□□ -0.3
CSMD2-203ENST00000373377 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
CSMD2-203ENST00000373377 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
CSMD2-203ENST00000373377 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
CSMD2-203ENST00000373377 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CSMD2-203ENST00000373377 ARHGEF5Q12774 1597 aa13.16□□□□□ -0.3
CSMD2-203ENST00000373377 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.31
CSMD2-203ENST00000373377 NCOA1Q15788 1441 aa13.13□□□□□ -0.31
CSMD2-203ENST00000373377 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
CSMD2-203ENST00000373377 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
CSMD2-203ENST00000373377 SKAP1Q86WV1 359 aa13.12□□□□□ -0.31
CSMD2-203ENST00000373377 KDM5DQ9BY66 1539 aa13.12□□□□□ -0.31
CSMD2-203ENST00000373377 TTC37Q6PGP7 1564 aa13.12□□□□□ -0.31
CSMD2-203ENST00000373377 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
CSMD2-203ENST00000373377 PZPP20742 1482 aa13.11□□□□□ -0.31
CSMD2-203ENST00000373377 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
CSMD2-203ENST00000373377 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
CSMD2-203ENST00000373377 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
CSMD2-203ENST00000373377 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
CSMD2-203ENST00000373377 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
CSMD2-203ENST00000373377 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
CSMD2-203ENST00000373377 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
CSMD2-203ENST00000373377 PKD2Q13563 968 aa13.08□□□□□ -0.32
CSMD2-203ENST00000373377 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
CSMD2-203ENST00000373377 PLIN1O60240 522 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms