RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PCF11O94913 1555 aaKnown RBP9.36□□□□□ -0.91
CHD6-202ENST00000373222 PHLDB1Q86UU1 1377 aa9.36□□□□□ -0.91
CHD6-202ENST00000373222 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
CHD6-202ENST00000373222 TOPBP1Q92547 1522 aa9.35□□□□□ -0.91
CHD6-202ENST00000373222 ZNF692Q9BU19 519 aaPredicted RBP9.35□□□□□ -0.91
CHD6-202ENST00000373222 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
CHD6-202ENST00000373222 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
CHD6-202ENST00000373222 DNMBPQ6XZF7 1577 aa9.33□□□□□ -0.92
CHD6-202ENST00000373222 FAM50AQ14320 339 aaKnown RBP9.33□□□□□ -0.92
CHD6-202ENST00000373222 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
CHD6-202ENST00000373222 RAB3GAP2Q9H2M9 1393 aa9.33□□□□□ -0.92
CHD6-202ENST00000373222 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
CHD6-202ENST00000373222 TDRD9Q8NDG6 1382 aaKnown RBP9.32□□□□□ -0.92
CHD6-202ENST00000373222 URB2Q14146 1524 aaKnown RBP9.32□□□□□ -0.92
CHD6-202ENST00000373222 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
CHD6-202ENST00000373222 TSHZ2Q9NRE2 1034 aa9.3□□□□□ -0.92
CHD6-202ENST00000373222 MAPKBP1O60336 1514 aa9.3□□□□□ -0.92
CHD6-202ENST00000373222 ABCA10Q8WWZ4 1543 aa9.3□□□□□ -0.92
CHD6-202ENST00000373222 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
CHD6-202ENST00000373222 PKD2Q13563 968 aa9.29□□□□□ -0.92
CHD6-202ENST00000373222 SIN3AQ96ST3 1273 aa9.29□□□□□ -0.92
CHD6-202ENST00000373222 CFAP43Q8NDM7 1665 aa9.29□□□□□ -0.92
CHD6-202ENST00000373222 MYT1Q01538 1121 aa9.28□□□□□ -0.92
CHD6-202ENST00000373222 NBR1Q14596 966 aa9.28□□□□□ -0.92
CHD6-202ENST00000373222 LRRIQ1Q96JM4 1722 aa9.28□□□□□ -0.92
CHD6-202ENST00000373222 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.28□□□□□ -0.92
CHD6-202ENST00000373222 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
CHD6-202ENST00000373222 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
CHD6-202ENST00000373222 WDR97A6NE52 1622 aa9.27□□□□□ -0.93
CHD6-202ENST00000373222 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
CHD6-202ENST00000373222 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
CHD6-202ENST00000373222 CLSPNQ9HAW4 1339 aa9.26□□□□□ -0.93
CHD6-202ENST00000373222 HIRIP3Q9BW71 556 aaPredicted RBP9.26□□□□□ -0.93
CHD6-202ENST00000373222 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CHD6-202ENST00000373222 FHAD1B1AJZ9 1412 aa9.25□□□□□ -0.93
CHD6-202ENST00000373222 MAP3K1Q13233 1512 aa9.24□□□□□ -0.93
CHD6-202ENST00000373222 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
CHD6-202ENST00000373222 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
CHD6-202ENST00000373222 SETD5Q9C0A6 1442 aa9.24□□□□□ -0.93
CHD6-202ENST00000373222 CUL7Q14999 1698 aa9.24□□□□□ -0.93
CHD6-202ENST00000373222 ARID3CA6NKF2 412 aa9.23□□□□□ -0.93
CHD6-202ENST00000373222 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
CHD6-202ENST00000373222 LAMC3Q9Y6N6 1575 aa9.22□□□□□ -0.93
CHD6-202ENST00000373222 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
CHD6-202ENST00000373222 SNAPC4Q5SXM2 1469 aa9.22□□□□□ -0.93
CHD6-202ENST00000373222 FYCO1Q9BQS8 1478 aa9.22□□□□□ -0.93
CHD6-202ENST00000373222 CASKIN1Q8WXD9 1431 aa9.21□□□□□ -0.93
CHD6-202ENST00000373222 GAPVD1Q14C86 1478 aa9.21□□□□□ -0.93
CHD6-202ENST00000373222 GALR2O43603 387 aaPredicted RBP9.21□□□□□ -0.93
CHD6-202ENST00000373222 PTPRKQ15262 1439 aa9.2□□□□□ -0.94
CHD6-202ENST00000373222 EFCAB5A4FU69 1503 aa9.2□□□□□ -0.94
CHD6-202ENST00000373222 FAM163AQ96GL9 167 aaPredicted RBP9.2□□□□□ -0.94
CHD6-202ENST00000373222 AQRO60306 1485 aaKnown RBP eCLIP9.18□□□□□ -0.949e-19■□□□□ 9
CHD6-202ENST00000373222 SAMD9Q5K651 1589 aa9.18□□□□□ -0.94
CHD6-202ENST00000373222 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
CHD6-202ENST00000373222 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
CHD6-202ENST00000373222 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
CHD6-202ENST00000373222 MAGI3Q5TCQ9 1506 aa9.17□□□□□ -0.94
CHD6-202ENST00000373222 DDX10Q13206 875 aaKnown RBP9.16□□□□□ -0.94
CHD6-202ENST00000373222 C7P10643 843 aa9.16□□□□□ -0.94
CHD6-202ENST00000373222 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
CHD6-202ENST00000373222 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
CHD6-202ENST00000373222 SLC39A7Q92504 469 aa9.15□□□□□ -0.94
CHD6-202ENST00000373222 CHIC2Q9UKJ5 165 aa9.15□□□□□ -0.94
CHD6-202ENST00000373222 PBRM1Q86U86 1689 aa9.15□□□□□ -0.94
CHD6-202ENST00000373222 GRIN2BQ13224 1484 aa9.15□□□□□ -0.95
CHD6-202ENST00000373222 NCOA2Q15596 1464 aa9.15□□□□□ -0.95
CHD6-202ENST00000373222 IFNLR1Q8IU57 520 aaPredicted RBP9.14□□□□□ -0.95
CHD6-202ENST00000373222 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
CHD6-202ENST00000373222 DNAJC5Q9H3Z4 198 aa9.13□□□□□ -0.95
CHD6-202ENST00000373222 CCDC18Q5T9S5 1454 aa9.13□□□□□ -0.95
CHD6-202ENST00000373222 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
CHD6-202ENST00000373222 RRP7BPQ9NSQ0 103 aa9.13□□□□□ -0.95
CHD6-202ENST00000373222 CDK13Q14004 1512 aaKnown RBP9.13□□□□□ -0.95
CHD6-202ENST00000373222 ZNF608Q9ULD9 1512 aaPredicted RBP9.12□□□□□ -0.95
CHD6-202ENST00000373222 PTPN23Q9H3S7 1636 aa9.11□□□□□ -0.95
CHD6-202ENST00000373222 MKRN4PQ13434 485 aaPredicted RBP9.11□□□□□ -0.95
CHD6-202ENST00000373222 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
CHD6-202ENST00000373222 KDM6BO15054 1643 aa9.11□□□□□ -0.95
CHD6-202ENST00000373222 SUPT6HQ7KZ85 1726 aaKnown RBP9.1□□□□□ -0.95
CHD6-202ENST00000373222 MYOM3Q5VTT5 1437 aa9.1□□□□□ -0.95
CHD6-202ENST00000373222 SPRYD3Q8NCJ5 442 aa9.1□□□□□ -0.95
CHD6-202ENST00000373222 NAIPQ13075 1403 aa9.1□□□□□ -0.95
CHD6-202ENST00000373222 PPP1R15AO75807 674 aaPredicted RBP9.1□□□□□ -0.95
CHD6-202ENST00000373222 VASPP50552 380 aaPredicted RBP9.1□□□□□ -0.95
CHD6-202ENST00000373222 POTEJP0CG39 1038 aa9.09□□□□□ -0.95
CHD6-202ENST00000373222 HFM1A2PYH4 1435 aa9.08□□□□□ -0.96
CHD6-202ENST00000373222 ADAMTS12P58397 1594 aa9.08□□□□□ -0.96
CHD6-202ENST00000373222 IQGAP2Q13576 1575 aa9.08□□□□□ -0.96
CHD6-202ENST00000373222 PAK3O75914 559 aaPredicted RBP9.08□□□□□ -0.96
CHD6-202ENST00000373222 UGGT2Q9NYU1 1516 aa9.08□□□□□ -0.96
CHD6-202ENST00000373222 THOC2Q8NI27 1593 aaKnown RBP9.08□□□□□ -0.96
CHD6-202ENST00000373222 ASTLQ6HA08 431 aaPredicted RBP9.07□□□□□ -0.96
CHD6-202ENST00000373222 SUPT16HQ9Y5B9 1047 aaKnown RBP9.07□□□□□ -0.96
CHD6-202ENST00000373222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD6-202ENST00000373222 EHBP1L1Q8N3D4 1523 aa9.07□□□□□ -0.96
CHD6-202ENST00000373222 DENND4BO75064 1496 aaPredicted RBP9.07□□□□□ -0.96
CHD6-202ENST00000373222 EPRSP07814 1512 aaKnown RBP9.06□□□□□ -0.96
CHD6-202ENST00000373222 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
CHD6-202ENST00000373222 TONSLQ96HA7 1378 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms