RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 HECW1Q76N89 1606 aa26.71■■□□□ 1.87
TRAPPC3-203ENST00000373163 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
TRAPPC3-203ENST00000373163 ARHGEF12Q9NZN5 1544 aa26.67■■□□□ 1.86
TRAPPC3-203ENST00000373163 DMRT2Q9Y5R5 561 aa26.67■■□□□ 1.86
TRAPPC3-203ENST00000373163 SCAPERQ9BY12 1400 aa26.66■■□□□ 1.86
TRAPPC3-203ENST00000373163 PREX1Q8TCU6 1659 aa26.64■■□□□ 1.86
TRAPPC3-203ENST00000373163 CEBPAP49715 358 aaPredicted RBP26.64■■□□□ 1.86
TRAPPC3-203ENST00000373163 ATP10AO60312 1499 aa26.63■■□□□ 1.85
TRAPPC3-203ENST00000373163 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
TRAPPC3-203ENST00000373163 PLCH2O75038 1416 aa26.61■■□□□ 1.85
TRAPPC3-203ENST00000373163 UHRF1BP1Q6BDS2 1440 aa26.57■■□□□ 1.84
TRAPPC3-203ENST00000373163 SPATA31D1Q6ZQQ2 1576 aa26.57■■□□□ 1.84
TRAPPC3-203ENST00000373163 STRCQ7RTU9 1775 aa26.55■■□□□ 1.84
TRAPPC3-203ENST00000373163 CDK13Q14004 1512 aaKnown RBP26.54■■□□□ 1.84
TRAPPC3-203ENST00000373163 EFCAB2Q5VUJ9 269 aa26.51■■□□□ 1.83
TRAPPC3-203ENST00000373163 PTPRTO14522 1441 aa26.5■■□□□ 1.83
TRAPPC3-203ENST00000373163 ZNF518AQ6AHZ1 1483 aa26.47■■□□□ 1.83
TRAPPC3-203ENST00000373163 EEA1Q15075 1411 aa26.42■■□□□ 1.82
TRAPPC3-203ENST00000373163 AFAP1Q8N556 730 aa26.42■■□□□ 1.82
TRAPPC3-203ENST00000373163 MYT1LQ9UL68 1186 aa26.42■■□□□ 1.82
TRAPPC3-203ENST00000373163 LTBP4Q8N2S1 1624 aa26.4■■□□□ 1.82
TRAPPC3-203ENST00000373163 KDM5CP41229 1560 aa26.4■■□□□ 1.82
TRAPPC3-203ENST00000373163 IQSEC2Q5JU85 1478 aa26.39■■□□□ 1.82
TRAPPC3-203ENST00000373163 MYO5CQ9NQX4 1742 aa26.39■■□□□ 1.81
TRAPPC3-203ENST00000373163 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
TRAPPC3-203ENST00000373163 DIP2CQ9Y2E4 1556 aa26.37■■□□□ 1.81
TRAPPC3-203ENST00000373163 ESF1Q9H501 851 aaKnown RBP26.36■■□□□ 1.81
TRAPPC3-203ENST00000373163 CDK11AQ9UQ88 783 aaPredicted RBP26.36■■□□□ 1.81
TRAPPC3-203ENST00000373163 REREQ9P2R6 1566 aa26.36■■□□□ 1.81
TRAPPC3-203ENST00000373163 ARHGAP5Q13017 1502 aa26.35■■□□□ 1.81
TRAPPC3-203ENST00000373163 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
TRAPPC3-203ENST00000373163 SETD1BQ9UPS6 1966 aaKnown RBP26.34■■□□□ 1.81
TRAPPC3-203ENST00000373163 NCOA1Q15788 1441 aa26.33■■□□□ 1.81
TRAPPC3-203ENST00000373163 C3P01024 1663 aa26.33■■□□□ 1.81
TRAPPC3-203ENST00000373163 KIF14Q15058 1648 aa26.32■■□□□ 1.8
TRAPPC3-203ENST00000373163 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
TRAPPC3-203ENST00000373163 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
TRAPPC3-203ENST00000373163 TROQ12816 1431 aaPredicted RBP26.29■■□□□ 1.8
TRAPPC3-203ENST00000373163 AGLP35573 1532 aa26.29■■□□□ 1.8
TRAPPC3-203ENST00000373163 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
TRAPPC3-203ENST00000373163 CLIP1P30622 1438 aa26.26■■□□□ 1.79
TRAPPC3-203ENST00000373163 CNTLNQ9NXG0 1405 aa26.25■■□□□ 1.79
TRAPPC3-203ENST00000373163 UBAP1LF5GYI3 381 aa26.21■■□□□ 1.79
TRAPPC3-203ENST00000373163 CAMSAP1Q5T5Y3 1602 aa26.21■■□□□ 1.79
TRAPPC3-203ENST00000373163 NPATQ14207 1427 aa26.19■■□□□ 1.78
TRAPPC3-203ENST00000373163 ZNF335Q9H4Z2 1342 aaPredicted RBP26.18■■□□□ 1.78
TRAPPC3-203ENST00000373163 ABCC1P33527 1531 aa26.18■■□□□ 1.78
TRAPPC3-203ENST00000373163 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
TRAPPC3-203ENST00000373163 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
TRAPPC3-203ENST00000373163 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
TRAPPC3-203ENST00000373163 CDC42BPBQ9Y5S2 1711 aa26.13■■□□□ 1.77
TRAPPC3-203ENST00000373163 ZMYM3Q14202 1370 aa26.12■■□□□ 1.77
TRAPPC3-203ENST00000373163 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
TRAPPC3-203ENST00000373163 PREX2Q70Z35 1606 aa26.1■■□□□ 1.77
TRAPPC3-203ENST00000373163 KIDINS220Q9ULH0 1771 aa26.1■■□□□ 1.77
TRAPPC3-203ENST00000373163 ITSN2Q9NZM3 1697 aa26.09■■□□□ 1.77
TRAPPC3-203ENST00000373163 PKD2Q13563 968 aa26.09■■□□□ 1.77
TRAPPC3-203ENST00000373163 MROH2AA6NES4 1674 aa26.07■■□□□ 1.76
TRAPPC3-203ENST00000373163 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
TRAPPC3-203ENST00000373163 TCOF1Q13428 1488 aaKnown RBP26.03■■□□□ 1.76
TRAPPC3-203ENST00000373163 SAMD9LQ8IVG5 1584 aa26.02■■□□□ 1.76
TRAPPC3-203ENST00000373163 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
TRAPPC3-203ENST00000373163 MYO3AQ8NEV4 1616 aa26■■□□□ 1.75
TRAPPC3-203ENST00000373163 PPP6R1Q9UPN7 881 aa26■■□□□ 1.75
TRAPPC3-203ENST00000373163 CEP170BQ9Y4F5 1589 aaPredicted RBP25.99■■□□□ 1.75
TRAPPC3-203ENST00000373163 SPAG9O60271 1321 aaKnown RBP25.99■■□□□ 1.75
TRAPPC3-203ENST00000373163 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
TRAPPC3-203ENST00000373163 ZNF777Q9ULD5 760 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC3-203ENST00000373163 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
TRAPPC3-203ENST00000373163 PTPRKQ15262 1439 aa25.97■■□□□ 1.75
TRAPPC3-203ENST00000373163 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
TRAPPC3-203ENST00000373163 HSPA1LP34931 641 aa25.97■■□□□ 1.75
TRAPPC3-203ENST00000373163 MED1Q15648 1581 aaPredicted RBP25.96■■□□□ 1.75
TRAPPC3-203ENST00000373163 SYCP2Q9BX26 1530 aa25.94■■□□□ 1.74
TRAPPC3-203ENST00000373163 CLTCQ00610 1675 aaKnown RBP25.94■■□□□ 1.74
TRAPPC3-203ENST00000373163 PIP4K2BP78356 416 aa25.94■■□□□ 1.74
TRAPPC3-203ENST00000373163 SUPT6HQ7KZ85 1726 aaKnown RBP25.93■■□□□ 1.74
TRAPPC3-203ENST00000373163 CDC42BPAQ5VT25 1732 aa25.92■■□□□ 1.74
TRAPPC3-203ENST00000373163 CASKIN1Q8WXD9 1431 aa25.92■■□□□ 1.74
TRAPPC3-203ENST00000373163 HNRNPMP52272 730 aaKnown RBP eCLIP25.92■■□□□ 1.74
TRAPPC3-203ENST00000373163 GGT6Q6P531 493 aa25.91■■□□□ 1.74
TRAPPC3-203ENST00000373163 A2MP01023 1474 aa25.91■■□□□ 1.74
TRAPPC3-203ENST00000373163 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
TRAPPC3-203ENST00000373163 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
TRAPPC3-203ENST00000373163 TOM1O60784 492 aa25.9■■□□□ 1.74
TRAPPC3-203ENST00000373163 A2ML1A8K2U0 1454 aa25.86■■□□□ 1.73
TRAPPC3-203ENST00000373163 GPATCH8Q9UKJ3 1502 aaKnown RBP25.86■■□□□ 1.73
TRAPPC3-203ENST00000373163 CPS1P31327 1500 aa25.85■■□□□ 1.73
TRAPPC3-203ENST00000373163 KIAA1107Q9UPP5 1409 aa25.85■■□□□ 1.73
TRAPPC3-203ENST00000373163 INO80Q9ULG1 1556 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC3-203ENST00000373163 PHF23Q9BUL5 403 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC3-203ENST00000373163 PLEKHH2Q8IVE3 1493 aa25.82■■□□□ 1.72
TRAPPC3-203ENST00000373163 DNMT1P26358 1616 aaKnown RBP25.81■■□□□ 1.72
TRAPPC3-203ENST00000373163 SHANK2Q9UPX8 1470 aa25.81■■□□□ 1.72
TRAPPC3-203ENST00000373163 CFDP1Q9UEE9 299 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC3-203ENST00000373163 FYCO1Q9BQS8 1478 aa25.77■■□□□ 1.72
TRAPPC3-203ENST00000373163 NEURL4Q96JN8 1562 aa25.77■■□□□ 1.72
TRAPPC3-203ENST00000373163 CCNB3Q8WWL7 1395 aa25.73■■□□□ 1.71
TRAPPC3-203ENST00000373163 TNRQ92752 1358 aa25.73■■□□□ 1.71
TRAPPC3-203ENST00000373163 FBXO31Q5XUX0 539 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms