RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 UHRF1BP1Q6BDS2 1440 aa20.06■□□□□ 0.8
CHCHD1-202ENST00000372837 CTTNBP2Q8WZ74 1663 aa20.06■□□□□ 0.8
CHCHD1-202ENST00000372837 EFCAB5A4FU69 1503 aa20.05■□□□□ 0.8
CHCHD1-202ENST00000372837 MAGI2Q86UL8 1455 aa20.02■□□□□ 0.8
CHCHD1-202ENST00000372837 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
CHCHD1-202ENST00000372837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
CHCHD1-202ENST00000372837 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
CHCHD1-202ENST00000372837 UBAP1LF5GYI3 381 aa19.99■□□□□ 0.79
CHCHD1-202ENST00000372837 HECW1Q76N89 1606 aa19.98■□□□□ 0.79
CHCHD1-202ENST00000372837 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
CHCHD1-202ENST00000372837 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
CHCHD1-202ENST00000372837 SETD1BQ9UPS6 1966 aaKnown RBP19.96■□□□□ 0.79
CHCHD1-202ENST00000372837 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
CHCHD1-202ENST00000372837 ATP10AO60312 1499 aa19.94■□□□□ 0.78
CHCHD1-202ENST00000372837 CFAP74Q9C0B2 1584 aa19.93■□□□□ 0.78
CHCHD1-202ENST00000372837 C9orf84Q5VXU9 1444 aa19.92■□□□□ 0.78
CHCHD1-202ENST00000372837 NCOA1Q15788 1441 aa19.91■□□□□ 0.78
CHCHD1-202ENST00000372837 RAPGEF6Q8TEU7 1601 aa19.91■□□□□ 0.78
CHCHD1-202ENST00000372837 PPARGC1BQ86YN6 1023 aaKnown RBP19.9■□□□□ 0.78
CHCHD1-202ENST00000372837 NUP153P49790 1475 aaKnown RBP19.89■□□□□ 0.77
CHCHD1-202ENST00000372837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.777e-10■■■□□ 19.2
CHCHD1-202ENST00000372837 ZNF335Q9H4Z2 1342 aaPredicted RBP19.89■□□□□ 0.77
CHCHD1-202ENST00000372837 SCAPERQ9BY12 1400 aa19.88■□□□□ 0.77
CHCHD1-202ENST00000372837 HSPA1LP34931 641 aa19.87■□□□□ 0.77
CHCHD1-202ENST00000372837 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
CHCHD1-202ENST00000372837 MYT1Q01538 1121 aa19.85■□□□□ 0.77
CHCHD1-202ENST00000372837 TRAPPC8Q9Y2L5 1435 aa19.83■□□□□ 0.76
CHCHD1-202ENST00000372837 C3P01024 1663 aa19.81■□□□□ 0.76
CHCHD1-202ENST00000372837 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
CHCHD1-202ENST00000372837 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
CHCHD1-202ENST00000372837 NCKAP5LQ9HCH0 1330 aa19.78■□□□□ 0.76
CHCHD1-202ENST00000372837 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
CHCHD1-202ENST00000372837 CAMSAP1Q5T5Y3 1602 aa19.77■□□□□ 0.76
CHCHD1-202ENST00000372837 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
CHCHD1-202ENST00000372837 PLCH2O75038 1416 aa19.76■□□□□ 0.75
CHCHD1-202ENST00000372837 PIP4K2BP78356 416 aa19.75■□□□□ 0.75
CHCHD1-202ENST00000372837 ESF1Q9H501 851 aaKnown RBP19.7■□□□□ 0.74
CHCHD1-202ENST00000372837 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
CHCHD1-202ENST00000372837 DIP2CQ9Y2E4 1556 aa19.68■□□□□ 0.74
CHCHD1-202ENST00000372837 REREQ9P2R6 1566 aa19.67■□□□□ 0.74
CHCHD1-202ENST00000372837 EFCAB2Q5VUJ9 269 aa19.67■□□□□ 0.74
CHCHD1-202ENST00000372837 EEA1Q15075 1411 aa19.67■□□□□ 0.74
CHCHD1-202ENST00000372837 ZNF518AQ6AHZ1 1483 aa19.67■□□□□ 0.74
CHCHD1-202ENST00000372837 TOM1O60784 492 aa19.66■□□□□ 0.74
CHCHD1-202ENST00000372837 PKD2Q13563 968 aa19.66■□□□□ 0.74
CHCHD1-202ENST00000372837 KDM5CP41229 1560 aa19.66■□□□□ 0.74
CHCHD1-202ENST00000372837 AGLP35573 1532 aa19.65■□□□□ 0.74
CHCHD1-202ENST00000372837 MYT1LQ9UL68 1186 aa19.64■□□□□ 0.73
CHCHD1-202ENST00000372837 NPATQ14207 1427 aa19.64■□□□□ 0.73
CHCHD1-202ENST00000372837 PLA2R1Q13018 1463 aa19.63■□□□□ 0.73
CHCHD1-202ENST00000372837 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
CHCHD1-202ENST00000372837 CNTLNQ9NXG0 1405 aa19.63■□□□□ 0.73
CHCHD1-202ENST00000372837 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
CHCHD1-202ENST00000372837 RGS17Q9UGC6 210 aaPredicted RBP19.61■□□□□ 0.73
CHCHD1-202ENST00000372837 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
CHCHD1-202ENST00000372837 CDK13Q14004 1512 aaKnown RBP19.59■□□□□ 0.73
CHCHD1-202ENST00000372837 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.72
CHCHD1-202ENST00000372837 MLH3Q9UHC1 1453 aa19.57■□□□□ 0.72
CHCHD1-202ENST00000372837 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
CHCHD1-202ENST00000372837 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
CHCHD1-202ENST00000372837 ALKQ9UM73 1620 aa19.54■□□□□ 0.72
CHCHD1-202ENST00000372837 CPS1P31327 1500 aa19.53■□□□□ 0.72
CHCHD1-202ENST00000372837 ZNF142P52746 1687 aaPredicted RBP19.52■□□□□ 0.72
CHCHD1-202ENST00000372837 CEP170BQ9Y4F5 1589 aaPredicted RBP19.52■□□□□ 0.71
CHCHD1-202ENST00000372837 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
CHCHD1-202ENST00000372837 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
CHCHD1-202ENST00000372837 MROH2AA6NES4 1674 aa19.51■□□□□ 0.71
CHCHD1-202ENST00000372837 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
CHCHD1-202ENST00000372837 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
CHCHD1-202ENST00000372837 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
CHCHD1-202ENST00000372837 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
CHCHD1-202ENST00000372837 KIF14Q15058 1648 aa19.46■□□□□ 0.71
CHCHD1-202ENST00000372837 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
CHCHD1-202ENST00000372837 KIDINS220Q9ULH0 1771 aa19.42■□□□□ 0.7
CHCHD1-202ENST00000372837 NEURL4Q96JN8 1562 aa19.4■□□□□ 0.7
CHCHD1-202ENST00000372837 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
CHCHD1-202ENST00000372837 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
CHCHD1-202ENST00000372837 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.69
CHCHD1-202ENST00000372837 A2ML1A8K2U0 1454 aa19.38■□□□□ 0.69
CHCHD1-202ENST00000372837 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
CHCHD1-202ENST00000372837 ABCC1P33527 1531 aa19.38■□□□□ 0.69
CHCHD1-202ENST00000372837 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
CHCHD1-202ENST00000372837 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
CHCHD1-202ENST00000372837 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
CHCHD1-202ENST00000372837 CDC42BPBQ9Y5S2 1711 aa19.36■□□□□ 0.69
CHCHD1-202ENST00000372837 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
CHCHD1-202ENST00000372837 ACIN1Q9UKV3 1341 aaKnown RBP19.34■□□□□ 0.69
CHCHD1-202ENST00000372837 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
CHCHD1-202ENST00000372837 POLR1AO95602 1720 aaPredicted RBP19.33■□□□□ 0.68
CHCHD1-202ENST00000372837 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
CHCHD1-202ENST00000372837 SAMD9LQ8IVG5 1584 aa19.29■□□□□ 0.68
CHCHD1-202ENST00000372837 GGT6Q6P531 493 aa19.29■□□□□ 0.68
CHCHD1-202ENST00000372837 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
CHCHD1-202ENST00000372837 SETD1AO15047 1707 aaKnown RBP19.28■□□□□ 0.68
CHCHD1-202ENST00000372837 CLIP1P30622 1438 aa19.28■□□□□ 0.68
CHCHD1-202ENST00000372837 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
CHCHD1-202ENST00000372837 PREX2Q70Z35 1606 aa19.27■□□□□ 0.68
CHCHD1-202ENST00000372837 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
CHCHD1-202ENST00000372837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.26■□□□□ 0.677e-7■■■■■ 36
CHCHD1-202ENST00000372837 NPHP4O75161 1426 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms