RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 CHIC2Q9UKJ5 165 aa25.6■■□□□ 1.69
CD40-201ENST00000372276 TRIM52Q96A61 297 aa25.59■■□□□ 1.69
CD40-201ENST00000372276 MPHOSPH9Q99550 1183 aa25.57■■□□□ 1.68
CD40-201ENST00000372276 CCER2I3L3R5 266 aa25.54■■□□□ 1.68
CD40-201ENST00000372276 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
CD40-201ENST00000372276 PLB1Q6P1J6 1458 aa25.53■■□□□ 1.68
CD40-201ENST00000372276 ABCA8O94911 1581 aa25.53■■□□□ 1.68
CD40-201ENST00000372276 ADGBQ8N7X0 1667 aa25.52■■□□□ 1.68
CD40-201ENST00000372276 CFDP1Q9UEE9 299 aaPredicted RBP25.52■■□□□ 1.68
CD40-201ENST00000372276 PRG4Q92954 1404 aaPredicted RBP25.51■■□□□ 1.67
CD40-201ENST00000372276 KDM5BQ9UGL1 1544 aa25.51■■□□□ 1.67
CD40-201ENST00000372276 GPATCH8Q9UKJ3 1502 aaKnown RBP25.51■■□□□ 1.67
CD40-201ENST00000372276 ARID3CA6NKF2 412 aa25.51■■□□□ 1.67
CD40-201ENST00000372276 ADGRL2O95490 1459 aa25.5■■□□□ 1.67
CD40-201ENST00000372276 CAMSAP2Q08AD1 1489 aa25.5■■□□□ 1.67
CD40-201ENST00000372276 KDM6BO15054 1643 aa25.5■■□□□ 1.67
CD40-201ENST00000372276 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
CD40-201ENST00000372276 PLEKHD1A6NEE1 506 aa25.48■■□□□ 1.67
CD40-201ENST00000372276 ANP32CO43423 234 aa25.48■■□□□ 1.67
CD40-201ENST00000372276 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
CD40-201ENST00000372276 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
CD40-201ENST00000372276 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
CD40-201ENST00000372276 KIF14Q15058 1648 aa25.45■■□□□ 1.66
CD40-201ENST00000372276 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
CD40-201ENST00000372276 ANKRD30BQ9BXX2 1392 aa25.44■■□□□ 1.66
CD40-201ENST00000372276 NCOA1Q15788 1441 aa25.43■■□□□ 1.66
CD40-201ENST00000372276 RPRD2Q5VT52 1461 aaKnown RBP25.43■■□□□ 1.66
CD40-201ENST00000372276 ANKRD30AQ9BXX3 1397 aa25.42■■□□□ 1.66
CD40-201ENST00000372276 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
CD40-201ENST00000372276 SHANK2Q9UPX8 1470 aa25.41■■□□□ 1.66
CD40-201ENST00000372276 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
CD40-201ENST00000372276 ATP10BO94823 1461 aa25.39■■□□□ 1.65
CD40-201ENST00000372276 EIF4G2P78344 907 aaKnown RBP eCLIP25.37■■□□□ 1.65
CD40-201ENST00000372276 ABCC10Q5T3U5 1492 aa25.37■■□□□ 1.65
CD40-201ENST00000372276 SLC4A1APQ9BWU0 796 aaKnown RBP25.36■■□□□ 1.65
CD40-201ENST00000372276 PTPRGP23470 1445 aa25.34■■□□□ 1.65
CD40-201ENST00000372276 CDC42BPAQ5VT25 1732 aa25.34■■□□□ 1.65
CD40-201ENST00000372276 L3MBTL2Q969R5 705 aa25.32■■□□□ 1.64
CD40-201ENST00000372276 RSPH4AQ5TD94 716 aa25.31■■□□□ 1.64
CD40-201ENST00000372276 ARHGEF5Q12774 1597 aa25.3■■□□□ 1.64
CD40-201ENST00000372276 PZPP20742 1482 aa25.29■■□□□ 1.64
CD40-201ENST00000372276 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
CD40-201ENST00000372276 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
CD40-201ENST00000372276 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
CD40-201ENST00000372276 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
CD40-201ENST00000372276 HIRIP3Q9BW71 556 aaPredicted RBP25.27■■□□□ 1.64
CD40-201ENST00000372276 ZNF777Q9ULD5 760 aaPredicted RBP25.26■■□□□ 1.63
CD40-201ENST00000372276 ANKRD50Q9ULJ7 1429 aa25.26■■□□□ 1.63
CD40-201ENST00000372276 TSPY4P0CV99 314 aa25.26■■□□□ 1.63
CD40-201ENST00000372276 TSPY10P0CW01 314 aa25.26■■□□□ 1.63
CD40-201ENST00000372276 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
CD40-201ENST00000372276 C9orf84Q5VXU9 1444 aa25.23■■□□□ 1.63
CD40-201ENST00000372276 KDM5DQ9BY66 1539 aa25.22■■□□□ 1.63
CD40-201ENST00000372276 KCNH8Q96L42 1107 aa25.18■■□□□ 1.62
CD40-201ENST00000372276 PREX2Q70Z35 1606 aa25.17■■□□□ 1.62
CD40-201ENST00000372276 FOXD1Q16676 465 aa25.17■■□□□ 1.62
CD40-201ENST00000372276 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
CD40-201ENST00000372276 SUPT16HQ9Y5B9 1047 aaKnown RBP25.15■■□□□ 1.62
CD40-201ENST00000372276 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
CD40-201ENST00000372276 CNTLNQ9NXG0 1405 aa25.15■■□□□ 1.62
CD40-201ENST00000372276 CCDC141Q6ZP82 1450 aa25.14■■□□□ 1.62
CD40-201ENST00000372276 PLEKHH2Q8IVE3 1493 aa25.13■■□□□ 1.61
CD40-201ENST00000372276 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
CD40-201ENST00000372276 SPATA31E1Q6ZUB1 1445 aa25.12■■□□□ 1.61
CD40-201ENST00000372276 PKD2Q13563 968 aa25.12■■□□□ 1.61
CD40-201ENST00000372276 CCDC7Q96M83 1385 aa25.12■■□□□ 1.61
CD40-201ENST00000372276 MAST1Q9Y2H9 1570 aa25.1■■□□□ 1.61
CD40-201ENST00000372276 ARHGEF12Q9NZN5 1544 aa25.1■■□□□ 1.61
CD40-201ENST00000372276 ARID4BQ4LE39 1312 aaPredicted RBP25.1■■□□□ 1.61
CD40-201ENST00000372276 NUP155O75694 1391 aa25.09■■□□□ 1.61
CD40-201ENST00000372276 ABCC2Q92887 1545 aa25.09■■□□□ 1.61
CD40-201ENST00000372276 CDC42BPBQ9Y5S2 1711 aa25.09■■□□□ 1.61
CD40-201ENST00000372276 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
CD40-201ENST00000372276 NBPF8Q3BBV2 869 aa25.08■■□□□ 1.61
CD40-201ENST00000372276 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.6
CD40-201ENST00000372276 SAMD9LQ8IVG5 1584 aa25.06■■□□□ 1.6
CD40-201ENST00000372276 UHRF1BP1LA0JNW5 1464 aa25.03■■□□□ 1.6
CD40-201ENST00000372276 HNRNPMP52272 730 aaKnown RBP eCLIP25.01■■□□□ 1.59
CD40-201ENST00000372276 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
CD40-201ENST00000372276 NEFLP07196 543 aa25■■□□□ 1.59
CD40-201ENST00000372276 ARHGAP5Q13017 1502 aa24.98■■□□□ 1.59
CD40-201ENST00000372276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.98■■□□□ 1.59
CD40-201ENST00000372276 RALGAPBQ86X10 1494 aa24.97■■□□□ 1.59
CD40-201ENST00000372276 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
CD40-201ENST00000372276 ROCK2O75116 1388 aaKnown RBP24.95■■□□□ 1.58
CD40-201ENST00000372276 KIF7Q2M1P5 1343 aa24.94■■□□□ 1.58
CD40-201ENST00000372276 UNC13BO14795 1591 aa24.94■■□□□ 1.58
CD40-201ENST00000372276 TTC37Q6PGP7 1564 aa24.94■■□□□ 1.58
CD40-201ENST00000372276 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
CD40-201ENST00000372276 PRKRIP1Q9H875 184 aaPredicted RBP24.93■■□□□ 1.58
CD40-201ENST00000372276 USP47Q96K76 1375 aa24.93■■□□□ 1.58
CD40-201ENST00000372276 SYCP2Q9BX26 1530 aa24.91■■□□□ 1.58
CD40-201ENST00000372276 C11orf95C9JLR9 678 aaPredicted RBP24.9■■□□□ 1.58
CD40-201ENST00000372276 KDM5CP41229 1560 aa24.9■■□□□ 1.58
CD40-201ENST00000372276 PLCH2O75038 1416 aa24.89■■□□□ 1.58
CD40-201ENST00000372276 DUOX2Q9NRD8 1548 aa24.89■■□□□ 1.57
CD40-201ENST00000372276 ARAP3Q8WWN8 1544 aa24.88■■□□□ 1.57
CD40-201ENST00000372276 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
CD40-201ENST00000372276 ERBINQ96RT1 1412 aa24.86■■□□□ 1.57
CD40-201ENST00000372276 ZCCHC11Q5TAX3 1644 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms