RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
PTCH2-201ENST00000372192 KIF7Q2M1P5 1343 aa15.07■□□□□ 0
PTCH2-201ENST00000372192 RCAN3Q9UKA8 241 aa15.06■□□□□ 0
PTCH2-201ENST00000372192 RGL3Q3MIN7 710 aa15.06■□□□□ 0
PTCH2-201ENST00000372192 RALBP1Q15311 655 aa15.06■□□□□ 0
PTCH2-201ENST00000372192 DCAF11Q8TEB1 546 aa15.06■□□□□ 0
PTCH2-201ENST00000372192 NAIPQ13075 1403 aa15.05■□□□□ 0
PTCH2-201ENST00000372192 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
PTCH2-201ENST00000372192 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ -0
PTCH2-201ENST00000372192 CCDC184Q52MB2 194 aa15.03■□□□□ -0
PTCH2-201ENST00000372192 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
PTCH2-201ENST00000372192 EIF5BO60841 1220 aaKnown RBP15.01□□□□□ -0.01
PTCH2-201ENST00000372192 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
PTCH2-201ENST00000372192 USP47Q96K76 1375 aa15□□□□□ -0.01
PTCH2-201ENST00000372192 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
PTCH2-201ENST00000372192 CC2D1BQ5T0F9 858 aaKnown RBP14.99□□□□□ -0.01
PTCH2-201ENST00000372192 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
PTCH2-201ENST00000372192 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
PTCH2-201ENST00000372192 KIF15Q9NS87 1388 aa14.99□□□□□ -0.01
PTCH2-201ENST00000372192 PDE3BQ13370 1112 aa14.99□□□□□ -0.01
PTCH2-201ENST00000372192 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
PTCH2-201ENST00000372192 NUP155O75694 1391 aa14.98□□□□□ -0.01
PTCH2-201ENST00000372192 NLRP13Q86W25 1043 aa14.98□□□□□ -0.01
PTCH2-201ENST00000372192 RTN4Q9NQC3 1192 aaKnown RBP14.97□□□□□ -0.01
PTCH2-201ENST00000372192 KNSTRNQ9Y448 316 aa14.97□□□□□ -0.01
PTCH2-201ENST00000372192 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
PTCH2-201ENST00000372192 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
PTCH2-201ENST00000372192 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
PTCH2-201ENST00000372192 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
PTCH2-201ENST00000372192 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
PTCH2-201ENST00000372192 ST20-MTHFSA0A0A6YYL1 179 aa14.94□□□□□ -0.02
PTCH2-201ENST00000372192 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
PTCH2-201ENST00000372192 PDE4AP27815 886 aa14.93□□□□□ -0.02
PTCH2-201ENST00000372192 TMF1P82094 1093 aa14.93□□□□□ -0.02
PTCH2-201ENST00000372192 EXOC6Q8TAG9 804 aa14.93□□□□□ -0.02
PTCH2-201ENST00000372192 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
PTCH2-201ENST00000372192 USP35Q9P2H5 1018 aa14.93□□□□□ -0.02
PTCH2-201ENST00000372192 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
PTCH2-201ENST00000372192 C11orf95C9JLR9 678 aaPredicted RBP14.92□□□□□ -0.02
PTCH2-201ENST00000372192 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
PTCH2-201ENST00000372192 RGS3P49796 1198 aa14.92□□□□□ -0.02
PTCH2-201ENST00000372192 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
PTCH2-201ENST00000372192 MIA2Q96PC5 1412 aa14.92□□□□□ -0.02
PTCH2-201ENST00000372192 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
PTCH2-201ENST00000372192 ABCA10Q8WWZ4 1543 aa14.91□□□□□ -0.02
PTCH2-201ENST00000372192 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
PTCH2-201ENST00000372192 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
PTCH2-201ENST00000372192 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
PTCH2-201ENST00000372192 BECN1Q14457 450 aa14.9□□□□□ -0.02
PTCH2-201ENST00000372192 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
PTCH2-201ENST00000372192 MS4A1P11836 297 aa14.89□□□□□ -0.03
PTCH2-201ENST00000372192 NCOA1Q15788 1441 aa14.88□□□□□ -0.03
PTCH2-201ENST00000372192 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
PTCH2-201ENST00000372192 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
PTCH2-201ENST00000372192 CFAP43Q8NDM7 1665 aa14.86□□□□□ -0.03
PTCH2-201ENST00000372192 BRD4O60885 1362 aaPredicted RBP14.84□□□□□ -0.03
PTCH2-201ENST00000372192 CUL7Q14999 1698 aa14.84□□□□□ -0.03
PTCH2-201ENST00000372192 ANKRD30BQ9BXX2 1392 aa14.84□□□□□ -0.03
PTCH2-201ENST00000372192 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
PTCH2-201ENST00000372192 PLIN1O60240 522 aa14.82□□□□□ -0.04
PTCH2-201ENST00000372192 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
PTCH2-201ENST00000372192 ROCK1Q13464 1354 aa14.81□□□□□ -0.04
PTCH2-201ENST00000372192 DAPK1P53355 1430 aa14.8□□□□□ -0.04
PTCH2-201ENST00000372192 HECW1Q76N89 1606 aa14.8□□□□□ -0.04
PTCH2-201ENST00000372192 ARXQ96QS3 562 aa14.8□□□□□ -0.04
PTCH2-201ENST00000372192 CRBNQ96SW2 442 aa14.8□□□□□ -0.04
PTCH2-201ENST00000372192 NESP48681 1621 aa14.79□□□□□ -0.04
PTCH2-201ENST00000372192 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
PTCH2-201ENST00000372192 RPRD2Q5VT52 1461 aaKnown RBP14.79□□□□□ -0.04
PTCH2-201ENST00000372192 EPRSP07814 1512 aaKnown RBP14.79□□□□□ -0.04
PTCH2-201ENST00000372192 GOLGA2Q08379 1002 aa14.78□□□□□ -0.04
PTCH2-201ENST00000372192 KIAA1107Q9UPP5 1409 aa14.78□□□□□ -0.04
PTCH2-201ENST00000372192 HNRNPMP52272 730 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTCH2-201ENST00000372192 ANKRD50Q9ULJ7 1429 aa14.78□□□□□ -0.04
PTCH2-201ENST00000372192 CENPQQ7L2Z9 268 aaPredicted RBP14.77□□□□□ -0.04
PTCH2-201ENST00000372192 PANK3Q9H999 370 aa14.77□□□□□ -0.04
PTCH2-201ENST00000372192 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
PTCH2-201ENST00000372192 HSP90AA1P07900 732 aaKnown RBP14.76□□□□□ -0.05
PTCH2-201ENST00000372192 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
PTCH2-201ENST00000372192 FRAT1Q92837 279 aaPredicted RBP14.75□□□□□ -0.05
PTCH2-201ENST00000372192 GSE1Q14687 1217 aa14.75□□□□□ -0.05
PTCH2-201ENST00000372192 GRIN2BQ13224 1484 aa14.75□□□□□ -0.05
PTCH2-201ENST00000372192 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
PTCH2-201ENST00000372192 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
PTCH2-201ENST00000372192 NEUROD2Q15784 382 aa14.74□□□□□ -0.05
PTCH2-201ENST00000372192 BACH2Q9BYV9 841 aa14.74□□□□□ -0.05
PTCH2-201ENST00000372192 CDK13Q14004 1512 aaKnown RBP14.74□□□□□ -0.05
PTCH2-201ENST00000372192 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
PTCH2-201ENST00000372192 CDCA7LQ96GN5 454 aa14.73□□□□□ -0.05
PTCH2-201ENST00000372192 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
PTCH2-201ENST00000372192 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
PTCH2-201ENST00000372192 SLC4A3P48751 1232 aa14.72□□□□□ -0.05
PTCH2-201ENST00000372192 JPH4Q96JJ6 628 aa14.71□□□□□ -0.05
PTCH2-201ENST00000372192 ABCC5O15440 1437 aa14.71□□□□□ -0.05
PTCH2-201ENST00000372192 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
PTCH2-201ENST00000372192 PRDM2Q13029 1718 aa14.71□□□□□ -0.06
PTCH2-201ENST00000372192 CFAP53Q96M91 514 aa14.71□□□□□ -0.06
PTCH2-201ENST00000372192 ANP32BQ92688 251 aaKnown RBP14.7□□□□□ -0.06
PTCH2-201ENST00000372192 GLIPR1L2Q4G1C9 344 aa14.7□□□□□ -0.06
PTCH2-201ENST00000372192 WASHC2CQ9Y4E1 1318 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms