RNA–Protein interactions for RNA: ENST00000372088.6

CCSER2-203, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2 BASIC

Gene CCSER2, Length 7,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-203ENST00000372088 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
CCSER2-203ENST00000372088 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
CCSER2-203ENST00000372088 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
CCSER2-203ENST00000372088 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
CCSER2-203ENST00000372088 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
CCSER2-203ENST00000372088 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
CCSER2-203ENST00000372088 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
CCSER2-203ENST00000372088 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
CCSER2-203ENST00000372088 PTPRGP23470 1445 aa18.48■□□□□ 0.55
CCSER2-203ENST00000372088 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
CCSER2-203ENST00000372088 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
CCSER2-203ENST00000372088 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
CCSER2-203ENST00000372088 MS4A1P11836 297 aa18.45■□□□□ 0.54
CCSER2-203ENST00000372088 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
CCSER2-203ENST00000372088 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
CCSER2-203ENST00000372088 PPM1GO15355 546 aaPredicted RBP18.42■□□□□ 0.54
CCSER2-203ENST00000372088 FOXD1Q16676 465 aa18.42■□□□□ 0.54
CCSER2-203ENST00000372088 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
CCSER2-203ENST00000372088 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
CCSER2-203ENST00000372088 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
CCSER2-203ENST00000372088 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
CCSER2-203ENST00000372088 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
CCSER2-203ENST00000372088 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
CCSER2-203ENST00000372088 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
CCSER2-203ENST00000372088 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
CCSER2-203ENST00000372088 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
CCSER2-203ENST00000372088 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
CCSER2-203ENST00000372088 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
CCSER2-203ENST00000372088 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
CCSER2-203ENST00000372088 EHBP1L1Q8N3D4 1523 aa18.35■□□□□ 0.53
CCSER2-203ENST00000372088 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
CCSER2-203ENST00000372088 BECN1Q14457 450 aa18.35■□□□□ 0.53
CCSER2-203ENST00000372088 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
CCSER2-203ENST00000372088 CCDC7Q96M83 1385 aa18.35■□□□□ 0.53
CCSER2-203ENST00000372088 USP47Q96K76 1375 aa18.34■□□□□ 0.53
CCSER2-203ENST00000372088 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.52
CCSER2-203ENST00000372088 ROCK1Q13464 1354 aa18.33■□□□□ 0.52
CCSER2-203ENST00000372088 HNRNPMP52272 730 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■■■■□ 22.9
CCSER2-203ENST00000372088 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
CCSER2-203ENST00000372088 TROQ12816 1431 aaPredicted RBP18.31■□□□□ 0.52
CCSER2-203ENST00000372088 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
CCSER2-203ENST00000372088 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
CCSER2-203ENST00000372088 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
CCSER2-203ENST00000372088 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
CCSER2-203ENST00000372088 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
CCSER2-203ENST00000372088 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
CCSER2-203ENST00000372088 HAP1P54257 671 aaPredicted RBP18.3■□□□□ 0.52
CCSER2-203ENST00000372088 CNTLNQ9NXG0 1405 aa18.3■□□□□ 0.52
CCSER2-203ENST00000372088 B4GALNT3Q6L9W6 998 aa18.3■□□□□ 0.52
CCSER2-203ENST00000372088 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
CCSER2-203ENST00000372088 ST20-MTHFSA0A0A6YYL1 179 aa18.29■□□□□ 0.52
CCSER2-203ENST00000372088 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
CCSER2-203ENST00000372088 AKNAQ7Z591 1439 aa18.28■□□□□ 0.52
CCSER2-203ENST00000372088 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
CCSER2-203ENST00000372088 NOP58Q9Y2X3 529 aaKnown RBP18.27■□□□□ 0.51
CCSER2-203ENST00000372088 NAIPQ13075 1403 aa18.26■□□□□ 0.51
CCSER2-203ENST00000372088 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
CCSER2-203ENST00000372088 HSP90AA1P07900 732 aaKnown RBP18.25■□□□□ 0.51
CCSER2-203ENST00000372088 POGKQ9P215 609 aa18.25■□□□□ 0.51
CCSER2-203ENST00000372088 MORC1Q86VD1 984 aa18.24■□□□□ 0.51
CCSER2-203ENST00000372088 KIF3BO15066 747 aa18.24■□□□□ 0.51
CCSER2-203ENST00000372088 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
CCSER2-203ENST00000372088 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
CCSER2-203ENST00000372088 NESP48681 1621 aa18.2■□□□□ 0.5
CCSER2-203ENST00000372088 GOLGA2Q08379 1002 aa18.2■□□□□ 0.5
CCSER2-203ENST00000372088 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
CCSER2-203ENST00000372088 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
CCSER2-203ENST00000372088 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
CCSER2-203ENST00000372088 LAMC3Q9Y6N6 1575 aa18.18■□□□□ 0.5
CCSER2-203ENST00000372088 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
CCSER2-203ENST00000372088 SYNJ2O15056 1496 aa18.17■□□□□ 0.5
CCSER2-203ENST00000372088 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
CCSER2-203ENST00000372088 EPRSP07814 1512 aaKnown RBP18.15■□□□□ 0.5
CCSER2-203ENST00000372088 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
CCSER2-203ENST00000372088 GGT6Q6P531 493 aa18.14■□□□□ 0.5
CCSER2-203ENST00000372088 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
CCSER2-203ENST00000372088 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
CCSER2-203ENST00000372088 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
CCSER2-203ENST00000372088 NBR1Q14596 966 aa18.12■□□□□ 0.49
CCSER2-203ENST00000372088 HDGFL2Q7Z4V5 671 aaPredicted RBP18.12■□□□□ 0.49
CCSER2-203ENST00000372088 DAPK1P53355 1430 aa18.12■□□□□ 0.49
CCSER2-203ENST00000372088 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
CCSER2-203ENST00000372088 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
CCSER2-203ENST00000372088 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
CCSER2-203ENST00000372088 NEUROD2Q15784 382 aa18.1■□□□□ 0.49
CCSER2-203ENST00000372088 PANK3Q9H999 370 aa18.09■□□□□ 0.49
CCSER2-203ENST00000372088 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
CCSER2-203ENST00000372088 CUL7Q14999 1698 aa18.08■□□□□ 0.48
CCSER2-203ENST00000372088 FRAT1Q92837 279 aaPredicted RBP18.08■□□□□ 0.48
CCSER2-203ENST00000372088 ANKRD30BQ9BXX2 1392 aa18.08■□□□□ 0.48
CCSER2-203ENST00000372088 AAMPQ13685 434 aa18.08■□□□□ 0.48
CCSER2-203ENST00000372088 RGS3P49796 1198 aa18.07■□□□□ 0.48
CCSER2-203ENST00000372088 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
CCSER2-203ENST00000372088 GOLGA6L22H0YM25 854 aa18.07■□□□□ 0.48
CCSER2-203ENST00000372088 SRPK2P78362 688 aaKnown RBP18.07■□□□□ 0.48
CCSER2-203ENST00000372088 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
CCSER2-203ENST00000372088 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
CCSER2-203ENST00000372088 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
CCSER2-203ENST00000372088 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
CCSER2-203ENST00000372088 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms