RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
RAE1-201ENST00000371242 SCAF1Q9H7N4 1312 aaKnown RBP16.03■□□□□ 0.16
RAE1-201ENST00000371242 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
RAE1-201ENST00000371242 ATP10BO94823 1461 aa16.02■□□□□ 0.16
RAE1-201ENST00000371242 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
RAE1-201ENST00000371242 SHROOM2Q13796 1616 aa16.01■□□□□ 0.15
RAE1-201ENST00000371242 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
RAE1-201ENST00000371242 ZNF644Q9H582 1327 aaPredicted RBP16.01■□□□□ 0.15
RAE1-201ENST00000371242 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
RAE1-201ENST00000371242 CDC42BPAQ5VT25 1732 aa16■□□□□ 0.15
RAE1-201ENST00000371242 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
RAE1-201ENST00000371242 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
RAE1-201ENST00000371242 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
RAE1-201ENST00000371242 PTPRGP23470 1445 aa15.99■□□□□ 0.15
RAE1-201ENST00000371242 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
RAE1-201ENST00000371242 CLASP1Q7Z460 1538 aa15.98■□□□□ 0.15
RAE1-201ENST00000371242 ABCC10Q5T3U5 1492 aa15.98■□□□□ 0.15
RAE1-201ENST00000371242 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
RAE1-201ENST00000371242 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
RAE1-201ENST00000371242 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
RAE1-201ENST00000371242 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
RAE1-201ENST00000371242 ADGRL2O95490 1459 aa15.95■□□□□ 0.14
RAE1-201ENST00000371242 NCOA1Q15788 1441 aa15.93■□□□□ 0.14
RAE1-201ENST00000371242 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
RAE1-201ENST00000371242 ZNF777Q9ULD5 760 aaPredicted RBP15.9■□□□□ 0.14
RAE1-201ENST00000371242 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
RAE1-201ENST00000371242 ANKRD30AQ9BXX3 1397 aa15.87■□□□□ 0.13
RAE1-201ENST00000371242 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
RAE1-201ENST00000371242 PREX2Q70Z35 1606 aa15.87■□□□□ 0.13
RAE1-201ENST00000371242 CDC42BPBQ9Y5S2 1711 aa15.86■□□□□ 0.13
RAE1-201ENST00000371242 ARHGEF5Q12774 1597 aa15.86■□□□□ 0.13
RAE1-201ENST00000371242 ABCC2Q92887 1545 aa15.86■□□□□ 0.13
RAE1-201ENST00000371242 PZPP20742 1482 aa15.85■□□□□ 0.13
RAE1-201ENST00000371242 RPRD2Q5VT52 1461 aaKnown RBP15.85■□□□□ 0.13
RAE1-201ENST00000371242 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
RAE1-201ENST00000371242 C9orf84Q5VXU9 1444 aa15.83■□□□□ 0.12
RAE1-201ENST00000371242 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
RAE1-201ENST00000371242 DDX10Q13206 875 aaKnown RBP15.83■□□□□ 0.12
RAE1-201ENST00000371242 FOXD1Q16676 465 aa15.83■□□□□ 0.12
RAE1-201ENST00000371242 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
RAE1-201ENST00000371242 SAMD9LQ8IVG5 1584 aa15.82■□□□□ 0.12
RAE1-201ENST00000371242 MBD5Q9P267 1494 aa15.81■□□□□ 0.12
RAE1-201ENST00000371242 HIRIP3Q9BW71 556 aaPredicted RBP15.81■□□□□ 0.12
RAE1-201ENST00000371242 TTC37Q6PGP7 1564 aa15.79■□□□□ 0.12
RAE1-201ENST00000371242 TEX14Q8IWB6 1497 aa15.79■□□□□ 0.12
RAE1-201ENST00000371242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.128e-6■□□□□ 10.5
RAE1-201ENST00000371242 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
RAE1-201ENST00000371242 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
RAE1-201ENST00000371242 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
RAE1-201ENST00000371242 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
RAE1-201ENST00000371242 MYO5CQ9NQX4 1742 aa15.78■□□□□ 0.12
RAE1-201ENST00000371242 UHRF1BP1LA0JNW5 1464 aa15.77■□□□□ 0.12
RAE1-201ENST00000371242 RSPH4AQ5TD94 716 aa15.77■□□□□ 0.12
RAE1-201ENST00000371242 KIAA1107Q9UPP5 1409 aa15.77■□□□□ 0.11
RAE1-201ENST00000371242 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.11
RAE1-201ENST00000371242 ZCCHC11Q5TAX3 1644 aaKnown RBP15.76■□□□□ 0.11
RAE1-201ENST00000371242 HNRNPMP52272 730 aaKnown RBP eCLIP15.76■□□□□ 0.11
RAE1-201ENST00000371242 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
RAE1-201ENST00000371242 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
RAE1-201ENST00000371242 KIF15Q9NS87 1388 aa15.74■□□□□ 0.11
RAE1-201ENST00000371242 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
RAE1-201ENST00000371242 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
RAE1-201ENST00000371242 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.11
RAE1-201ENST00000371242 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAE1-201ENST00000371242 PKD2Q13563 968 aa15.71■□□□□ 0.11
RAE1-201ENST00000371242 NUP155O75694 1391 aa15.71■□□□□ 0.1
RAE1-201ENST00000371242 ANP32CO43423 234 aa15.68■□□□□ 0.1
RAE1-201ENST00000371242 NBPF8Q3BBV2 869 aa15.68■□□□□ 0.1
RAE1-201ENST00000371242 CCER2I3L3R5 266 aa15.68■□□□□ 0.1
RAE1-201ENST00000371242 PLXNC1O60486 1568 aa15.68■□□□□ 0.1
RAE1-201ENST00000371242 PLCH2O75038 1416 aa15.67■□□□□ 0.1
RAE1-201ENST00000371242 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
RAE1-201ENST00000371242 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
RAE1-201ENST00000371242 WASHC2AQ641Q2 1341 aa15.65■□□□□ 0.1
RAE1-201ENST00000371242 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
RAE1-201ENST00000371242 UNC13BO14795 1591 aa15.65■□□□□ 0.1
RAE1-201ENST00000371242 FAM135AQ9P2D6 1515 aa15.64■□□□□ 0.09
RAE1-201ENST00000371242 SPATA31E1Q6ZUB1 1445 aa15.63■□□□□ 0.09
RAE1-201ENST00000371242 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
RAE1-201ENST00000371242 ARAP3Q8WWN8 1544 aa15.62■□□□□ 0.09
RAE1-201ENST00000371242 ABCC1P33527 1531 aa15.62■□□□□ 0.09
RAE1-201ENST00000371242 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
RAE1-201ENST00000371242 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
RAE1-201ENST00000371242 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
RAE1-201ENST00000371242 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
RAE1-201ENST00000371242 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
RAE1-201ENST00000371242 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
RAE1-201ENST00000371242 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.09
RAE1-201ENST00000371242 CCDC7Q96M83 1385 aa15.58■□□□□ 0.08
RAE1-201ENST00000371242 CNTLNQ9NXG0 1405 aa15.58■□□□□ 0.08
RAE1-201ENST00000371242 WDR7Q9Y4E6 1490 aa15.57■□□□□ 0.08
RAE1-201ENST00000371242 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
RAE1-201ENST00000371242 MAGI2Q86UL8 1455 aa15.56■□□□□ 0.08
RAE1-201ENST00000371242 C11orf95C9JLR9 678 aaPredicted RBP15.56■□□□□ 0.08
RAE1-201ENST00000371242 RALGAPBQ86X10 1494 aa15.55■□□□□ 0.08
RAE1-201ENST00000371242 KDM5CP41229 1560 aa15.55■□□□□ 0.08
RAE1-201ENST00000371242 TRAPPC8Q9Y2L5 1435 aa15.54■□□□□ 0.08
RAE1-201ENST00000371242 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
RAE1-201ENST00000371242 RTEL1-TNFRSF6BF6WH68 1400 aa15.52■□□□□ 0.08
RAE1-201ENST00000371242 USP47Q96K76 1375 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms