RNA–Protein interactions for RNA: ENST00000370493.3

SPANXN1-201, Transcript of SPANX family member N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPANXN1, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPANXN1-201ENST00000370493 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
SPANXN1-201ENST00000370493 IER5LQ5T953 404 aa9.65□□□□□ -0.86
SPANXN1-201ENST00000370493 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.87
SPANXN1-201ENST00000370493 AQRO60306 1485 aaKnown RBP eCLIP9.64□□□□□ -0.87
SPANXN1-201ENST00000370493 ARHGEF11O15085 1522 aa9.63□□□□□ -0.87
SPANXN1-201ENST00000370493 SEC24BO95487 1268 aa9.62□□□□□ -0.87
SPANXN1-201ENST00000370493 FBXO41Q8TF61 875 aa9.62□□□□□ -0.87
SPANXN1-201ENST00000370493 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
SPANXN1-201ENST00000370493 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
SPANXN1-201ENST00000370493 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
SPANXN1-201ENST00000370493 PSEN1P49768 467 aa9.61□□□□□ -0.87
SPANXN1-201ENST00000370493 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
SPANXN1-201ENST00000370493 IRX5P78411 483 aaPredicted RBP9.6□□□□□ -0.87
SPANXN1-201ENST00000370493 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
SPANXN1-201ENST00000370493 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
SPANXN1-201ENST00000370493 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
SPANXN1-201ENST00000370493 ARXQ96QS3 562 aa9.56□□□□□ -0.88
SPANXN1-201ENST00000370493 MAMSTRQ6ZN01 415 aa9.55□□□□□ -0.88
SPANXN1-201ENST00000370493 ARAP1Q96P48 1450 aa9.54□□□□□ -0.88
SPANXN1-201ENST00000370493 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
SPANXN1-201ENST00000370493 PLCG2P16885 1265 aa9.54□□□□□ -0.88
SPANXN1-201ENST00000370493 OCEL1Q9H607 264 aa9.54□□□□□ -0.88
SPANXN1-201ENST00000370493 SOGA1O94964 1423 aa9.54□□□□□ -0.88
SPANXN1-201ENST00000370493 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
SPANXN1-201ENST00000370493 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
SPANXN1-201ENST00000370493 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
SPANXN1-201ENST00000370493 EIF4G3O43432 1585 aaKnown RBP9.51□□□□□ -0.89
SPANXN1-201ENST00000370493 POLA1P09884 1462 aaPredicted RBP9.51□□□□□ -0.89
SPANXN1-201ENST00000370493 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
SPANXN1-201ENST00000370493 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
SPANXN1-201ENST00000370493 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
SPANXN1-201ENST00000370493 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
SPANXN1-201ENST00000370493 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
SPANXN1-201ENST00000370493 CABP2Q9NPB3 220 aa9.49□□□□□ -0.89
SPANXN1-201ENST00000370493 SNAPC4Q5SXM2 1469 aa9.48□□□□□ -0.89
SPANXN1-201ENST00000370493 DISP3Q9P2K9 1392 aa9.47□□□□□ -0.89
SPANXN1-201ENST00000370493 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.9
SPANXN1-201ENST00000370493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPANXN1-201ENST00000370493 PKD2Q13563 968 aa9.45□□□□□ -0.9
SPANXN1-201ENST00000370493 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
SPANXN1-201ENST00000370493 TIMELESSQ9UNS1 1208 aa9.45□□□□□ -0.9
SPANXN1-201ENST00000370493 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
SPANXN1-201ENST00000370493 FGD5Q6ZNL6 1462 aa9.44□□□□□ -0.9
SPANXN1-201ENST00000370493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
SPANXN1-201ENST00000370493 DPY19L2Q6NUT2 758 aa9.43□□□□□ -0.9
SPANXN1-201ENST00000370493 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
SPANXN1-201ENST00000370493 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
SPANXN1-201ENST00000370493 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
SPANXN1-201ENST00000370493 GRIN2BQ13224 1484 aa9.41□□□□□ -0.9
SPANXN1-201ENST00000370493 SUPT5HO00267 1087 aaKnown RBP9.41□□□□□ -0.9
SPANXN1-201ENST00000370493 VGFO15240 615 aaPredicted RBP9.41□□□□□ -0.9
SPANXN1-201ENST00000370493 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
SPANXN1-201ENST00000370493 SLAIN1Q8ND83 568 aa9.41□□□□□ -0.9
SPANXN1-201ENST00000370493 CHD1O14646 1710 aa9.41□□□□□ -0.9
SPANXN1-201ENST00000370493 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
SPANXN1-201ENST00000370493 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
SPANXN1-201ENST00000370493 SYNJ2O15056 1496 aa9.39□□□□□ -0.91
SPANXN1-201ENST00000370493 GAPVD1Q14C86 1478 aa9.39□□□□□ -0.91
SPANXN1-201ENST00000370493 MAGI1Q96QZ7 1491 aaPredicted RBP9.39□□□□□ -0.91
SPANXN1-201ENST00000370493 CUX1P39880 1505 aa9.38□□□□□ -0.91
SPANXN1-201ENST00000370493 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
SPANXN1-201ENST00000370493 PRDM2Q13029 1718 aa9.37□□□□□ -0.91
SPANXN1-201ENST00000370493 RGL2O15211 777 aa9.37□□□□□ -0.91
SPANXN1-201ENST00000370493 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
SPANXN1-201ENST00000370493 CLASP1Q7Z460 1538 aa9.36□□□□□ -0.91
SPANXN1-201ENST00000370493 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
SPANXN1-201ENST00000370493 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
SPANXN1-201ENST00000370493 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
SPANXN1-201ENST00000370493 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.35□□□□□ -0.91
SPANXN1-201ENST00000370493 POTEMA6NI47 508 aa9.33□□□□□ -0.92
SPANXN1-201ENST00000370493 POTEGQ6S5H5 508 aa9.32□□□□□ -0.92
SPANXN1-201ENST00000370493 BCL11BQ9C0K0 894 aaPredicted RBP9.32□□□□□ -0.92
SPANXN1-201ENST00000370493 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
SPANXN1-201ENST00000370493 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
SPANXN1-201ENST00000370493 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
SPANXN1-201ENST00000370493 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
SPANXN1-201ENST00000370493 BOLA1Q9Y3E2 137 aa9.31□□□□□ -0.92
SPANXN1-201ENST00000370493 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
SPANXN1-201ENST00000370493 SOX12O15370 315 aa9.3□□□□□ -0.92
SPANXN1-201ENST00000370493 C3orf67Q6ZVT6 689 aa9.3□□□□□ -0.92
SPANXN1-201ENST00000370493 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
SPANXN1-201ENST00000370493 WRNQ14191 1432 aaPredicted RBP eCLIP9.3□□□□□ -0.92
SPANXN1-201ENST00000370493 FAM69CQ0P6D2 419 aa9.29□□□□□ -0.92
SPANXN1-201ENST00000370493 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
SPANXN1-201ENST00000370493 ABCA10Q8WWZ4 1543 aa9.29□□□□□ -0.92
SPANXN1-201ENST00000370493 ERCC6L2Q5T890 1561 aa9.29□□□□□ -0.92
SPANXN1-201ENST00000370493 STK25O00506 426 aa9.28□□□□□ -0.92
SPANXN1-201ENST00000370493 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
SPANXN1-201ENST00000370493 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
SPANXN1-201ENST00000370493 TMEM121BQ9BXQ6 578 aaPredicted RBP9.27□□□□□ -0.93
SPANXN1-201ENST00000370493 GRIN2AQ12879 1464 aa9.27□□□□□ -0.93
SPANXN1-201ENST00000370493 WDR97A6NE52 1622 aa9.27□□□□□ -0.93
SPANXN1-201ENST00000370493 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
SPANXN1-201ENST00000370493 ST18O60284 1047 aa9.26□□□□□ -0.93
SPANXN1-201ENST00000370493 NBR1Q14596 966 aa9.26□□□□□ -0.93
SPANXN1-201ENST00000370493 FHAD1B1AJZ9 1412 aa9.25□□□□□ -0.93
SPANXN1-201ENST00000370493 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
SPANXN1-201ENST00000370493 NUP160Q12769 1436 aa9.24□□□□□ -0.93
SPANXN1-201ENST00000370493 G3V3G9 751 aa9.24□□□□□ -0.93
SPANXN1-201ENST00000370493 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms