RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
THBS3-201ENST00000368378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
THBS3-201ENST00000368378 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
THBS3-201ENST00000368378 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
THBS3-201ENST00000368378 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
THBS3-201ENST00000368378 L3MBTL2Q969R5 705 aa12.24□□□□□ -0.45
THBS3-201ENST00000368378 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
THBS3-201ENST00000368378 KDM2AQ9Y2K7 1162 aa12.23□□□□□ -0.45
THBS3-201ENST00000368378 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
THBS3-201ENST00000368378 MSH5O43196 834 aa12.23□□□□□ -0.45
THBS3-201ENST00000368378 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
THBS3-201ENST00000368378 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
THBS3-201ENST00000368378 ZNF644Q9H582 1327 aaPredicted RBP12.22□□□□□ -0.45
THBS3-201ENST00000368378 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.46
THBS3-201ENST00000368378 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
THBS3-201ENST00000368378 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
THBS3-201ENST00000368378 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
THBS3-201ENST00000368378 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
THBS3-201ENST00000368378 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
THBS3-201ENST00000368378 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
THBS3-201ENST00000368378 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
THBS3-201ENST00000368378 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
THBS3-201ENST00000368378 EHBP1L1Q8N3D4 1523 aa12.17□□□□□ -0.46
THBS3-201ENST00000368378 PBRM1Q86U86 1689 aa12.15□□□□□ -0.46
THBS3-201ENST00000368378 NBPF8Q3BBV2 869 aa12.15□□□□□ -0.47
THBS3-201ENST00000368378 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
THBS3-201ENST00000368378 KDM6BO15054 1643 aa12.14□□□□□ -0.47
THBS3-201ENST00000368378 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
THBS3-201ENST00000368378 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
THBS3-201ENST00000368378 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
THBS3-201ENST00000368378 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
THBS3-201ENST00000368378 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
THBS3-201ENST00000368378 ANO8Q9HCE9 1232 aaPredicted RBP12.11□□□□□ -0.47
THBS3-201ENST00000368378 CHD1O14646 1710 aa12.11□□□□□ -0.47
THBS3-201ENST00000368378 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
THBS3-201ENST00000368378 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
THBS3-201ENST00000368378 RGL3Q3MIN7 710 aa12.1□□□□□ -0.47
THBS3-201ENST00000368378 KDM5BQ9UGL1 1544 aa12.1□□□□□ -0.47
THBS3-201ENST00000368378 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
THBS3-201ENST00000368378 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
THBS3-201ENST00000368378 IQGAP2Q13576 1575 aa12.09□□□□□ -0.47
THBS3-201ENST00000368378 CCDC136Q96JN2 1154 aa12.09□□□□□ -0.47
THBS3-201ENST00000368378 KIAA0586Q9BVV6 1533 aa12.08□□□□□ -0.48
THBS3-201ENST00000368378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
THBS3-201ENST00000368378 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
THBS3-201ENST00000368378 TMC1Q8TDI8 760 aa12.06□□□□□ -0.48
THBS3-201ENST00000368378 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
THBS3-201ENST00000368378 PPP4R2Q9NY27 417 aa12.06□□□□□ -0.48
THBS3-201ENST00000368378 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
THBS3-201ENST00000368378 KIF7Q2M1P5 1343 aa12.05□□□□□ -0.48
THBS3-201ENST00000368378 TCOF1Q13428 1488 aaKnown RBP12.05□□□□□ -0.48
THBS3-201ENST00000368378 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
THBS3-201ENST00000368378 CFDP1Q9UEE9 299 aaPredicted RBP12.04□□□□□ -0.48
THBS3-201ENST00000368378 AKNAQ7Z591 1439 aa12.04□□□□□ -0.48
THBS3-201ENST00000368378 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
THBS3-201ENST00000368378 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
THBS3-201ENST00000368378 CCDC7Q96M83 1385 aa12.03□□□□□ -0.48
THBS3-201ENST00000368378 ERCC6L2Q5T890 1561 aa12.03□□□□□ -0.48
THBS3-201ENST00000368378 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
THBS3-201ENST00000368378 PKD2Q13563 968 aa12.03□□□□□ -0.48
THBS3-201ENST00000368378 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
THBS3-201ENST00000368378 DAPK1P53355 1430 aa12.03□□□□□ -0.48
THBS3-201ENST00000368378 MIA2Q96PC5 1412 aa12.02□□□□□ -0.48
THBS3-201ENST00000368378 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
THBS3-201ENST00000368378 ABCC5O15440 1437 aa12.01□□□□□ -0.49
THBS3-201ENST00000368378 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
THBS3-201ENST00000368378 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
THBS3-201ENST00000368378 DCAF11Q8TEB1 546 aa12□□□□□ -0.49
THBS3-201ENST00000368378 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
THBS3-201ENST00000368378 PLIN1O60240 522 aa11.98□□□□□ -0.49
THBS3-201ENST00000368378 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
THBS3-201ENST00000368378 NCOA1Q15788 1441 aa11.98□□□□□ -0.49
THBS3-201ENST00000368378 NUP160Q12769 1436 aa11.97□□□□□ -0.49
THBS3-201ENST00000368378 CARMIL2Q6F5E8 1435 aa11.97□□□□□ -0.49
THBS3-201ENST00000368378 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
THBS3-201ENST00000368378 RPRD2Q5VT52 1461 aaKnown RBP11.97□□□□□ -0.49
THBS3-201ENST00000368378 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
THBS3-201ENST00000368378 PTPRGP23470 1445 aa11.96□□□□□ -0.49
THBS3-201ENST00000368378 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.5
THBS3-201ENST00000368378 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.5
THBS3-201ENST00000368378 ARXQ96QS3 562 aa11.96□□□□□ -0.5
THBS3-201ENST00000368378 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
THBS3-201ENST00000368378 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
THBS3-201ENST00000368378 PLB1Q6P1J6 1458 aa11.95□□□□□ -0.5
THBS3-201ENST00000368378 TEX14Q8IWB6 1497 aa11.94□□□□□ -0.5
THBS3-201ENST00000368378 KIAA0556O60303 1618 aa11.94□□□□□ -0.5
THBS3-201ENST00000368378 ROCK1Q13464 1354 aa11.94□□□□□ -0.5
THBS3-201ENST00000368378 HNRNPMP52272 730 aaKnown RBP eCLIP11.94□□□□□ -0.5
THBS3-201ENST00000368378 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
THBS3-201ENST00000368378 UBE2Q2Q8WVN8 375 aa11.93□□□□□ -0.5
THBS3-201ENST00000368378 ANP32AP39687 249 aaKnown RBP11.92□□□□□ -0.5
THBS3-201ENST00000368378 EXOC6Q8TAG9 804 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 NOP58Q9Y2X3 529 aaKnown RBP11.92□□□□□ -0.5
THBS3-201ENST00000368378 RAPGEF6Q8TEU7 1601 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 USP47Q96K76 1375 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
THBS3-201ENST00000368378 NUP155O75694 1391 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms