RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 EIF4G3O43432 1585 aaKnown RBP11.13□□□□□ -0.63
CD46-208ENST00000367042 MYOM3Q5VTT5 1437 aa11.13□□□□□ -0.63
CD46-208ENST00000367042 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
CD46-208ENST00000367042 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
CD46-208ENST00000367042 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
CD46-208ENST00000367042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.633e-6■■□□□ 12.8
CD46-208ENST00000367042 IQGAP2Q13576 1575 aa11.1□□□□□ -0.63
CD46-208ENST00000367042 PTPN23Q9H3S7 1636 aa11.1□□□□□ -0.63
CD46-208ENST00000367042 DEKP35659 375 aaKnown RBP11.1□□□□□ -0.63
CD46-208ENST00000367042 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
CD46-208ENST00000367042 CNTLNQ9NXG0 1405 aa11.1□□□□□ -0.63
CD46-208ENST00000367042 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
CD46-208ENST00000367042 NOP58Q9Y2X3 529 aaKnown RBP11.09□□□□□ -0.63
CD46-208ENST00000367042 CCDC7Q96M83 1385 aa11.09□□□□□ -0.63
CD46-208ENST00000367042 NBPF8Q3BBV2 869 aa11.09□□□□□ -0.63
CD46-208ENST00000367042 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
CD46-208ENST00000367042 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
CD46-208ENST00000367042 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
CD46-208ENST00000367042 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
CD46-208ENST00000367042 UGGT2Q9NYU1 1516 aa11.06□□□□□ -0.64
CD46-208ENST00000367042 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
CD46-208ENST00000367042 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
CD46-208ENST00000367042 ZNF644Q9H582 1327 aaPredicted RBP11.05□□□□□ -0.64
CD46-208ENST00000367042 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
CD46-208ENST00000367042 AKNAQ7Z591 1439 aa11.04□□□□□ -0.64
CD46-208ENST00000367042 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
CD46-208ENST00000367042 MAGI1Q96QZ7 1491 aaPredicted RBP11.04□□□□□ -0.64
CD46-208ENST00000367042 KIAA0586Q9BVV6 1533 aa11.03□□□□□ -0.64
CD46-208ENST00000367042 DISP1Q96F81 1524 aa11.02□□□□□ -0.65
CD46-208ENST00000367042 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
CD46-208ENST00000367042 NUDCQ9Y266 331 aa11.01□□□□□ -0.65
CD46-208ENST00000367042 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
CD46-208ENST00000367042 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
CD46-208ENST00000367042 KIAA0556O60303 1618 aa11.01□□□□□ -0.65
CD46-208ENST00000367042 SYNJ2O15056 1496 aa11□□□□□ -0.65
CD46-208ENST00000367042 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
CD46-208ENST00000367042 ARHGEF11O15085 1522 aa11□□□□□ -0.65
CD46-208ENST00000367042 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
CD46-208ENST00000367042 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
CD46-208ENST00000367042 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
CD46-208ENST00000367042 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
CD46-208ENST00000367042 FBLN2P98095 1184 aa10.98□□□□□ -0.65
CD46-208ENST00000367042 PKD2Q13563 968 aa10.98□□□□□ -0.65
CD46-208ENST00000367042 CFDP1Q9UEE9 299 aaPredicted RBP10.98□□□□□ -0.65
CD46-208ENST00000367042 CDK13Q14004 1512 aaKnown RBP10.98□□□□□ -0.65
CD46-208ENST00000367042 LAS1LQ9Y4W2 734 aaKnown RBP10.97□□□□□ -0.65
CD46-208ENST00000367042 EPRSP07814 1512 aaKnown RBP10.97□□□□□ -0.65
CD46-208ENST00000367042 NUP160Q12769 1436 aa10.97□□□□□ -0.65
CD46-208ENST00000367042 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.66
CD46-208ENST00000367042 USP47Q96K76 1375 aa10.96□□□□□ -0.66
CD46-208ENST00000367042 KDM5BQ9UGL1 1544 aa10.96□□□□□ -0.66
CD46-208ENST00000367042 KDM6BO15054 1643 aa10.96□□□□□ -0.66
CD46-208ENST00000367042 ANKRD30BQ9BXX2 1392 aa10.94□□□□□ -0.66
CD46-208ENST00000367042 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
CD46-208ENST00000367042 EXOC6Q8TAG9 804 aa10.93□□□□□ -0.66
CD46-208ENST00000367042 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
CD46-208ENST00000367042 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
CD46-208ENST00000367042 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
CD46-208ENST00000367042 NUP153P49790 1475 aaKnown RBP10.92□□□□□ -0.66
CD46-208ENST00000367042 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
CD46-208ENST00000367042 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
CD46-208ENST00000367042 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
CD46-208ENST00000367042 RPRD2Q5VT52 1461 aaKnown RBP10.91□□□□□ -0.66
CD46-208ENST00000367042 SMG6Q86US8 1419 aaKnown RBP10.91□□□□□ -0.66
CD46-208ENST00000367042 DAPK1P53355 1430 aa10.9□□□□□ -0.66
CD46-208ENST00000367042 PNISRQ8TF01 805 aaKnown RBP10.9□□□□□ -0.66
CD46-208ENST00000367042 NEFMP07197 916 aa10.9□□□□□ -0.66
CD46-208ENST00000367042 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
CD46-208ENST00000367042 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
CD46-208ENST00000367042 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.67
CD46-208ENST00000367042 PLIN1O60240 522 aa10.89□□□□□ -0.67
CD46-208ENST00000367042 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
CD46-208ENST00000367042 MIA2Q96PC5 1412 aa10.89□□□□□ -0.67
CD46-208ENST00000367042 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
CD46-208ENST00000367042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.674e-9■■□□□ 11.7
CD46-208ENST00000367042 NUP155O75694 1391 aa10.88□□□□□ -0.67
CD46-208ENST00000367042 ABCC5O15440 1437 aa10.88□□□□□ -0.67
CD46-208ENST00000367042 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
CD46-208ENST00000367042 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
CD46-208ENST00000367042 SKAP1Q86WV1 359 aa10.87□□□□□ -0.67
CD46-208ENST00000367042 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
CD46-208ENST00000367042 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
CD46-208ENST00000367042 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
CD46-208ENST00000367042 CHD1O14646 1710 aa10.86□□□□□ -0.67
CD46-208ENST00000367042 TEX14Q8IWB6 1497 aa10.85□□□□□ -0.67
CD46-208ENST00000367042 DHX29Q7Z478 1369 aaKnown RBP10.85□□□□□ -0.67
CD46-208ENST00000367042 PDE4AP27815 886 aa10.85□□□□□ -0.67
CD46-208ENST00000367042 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
CD46-208ENST00000367042 KIF15Q9NS87 1388 aa10.84□□□□□ -0.67
CD46-208ENST00000367042 GCC2Q8IWJ2 1684 aa10.84□□□□□ -0.67
CD46-208ENST00000367042 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
CD46-208ENST00000367042 ABCA8O94911 1581 aa10.84□□□□□ -0.67
CD46-208ENST00000367042 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.67
CD46-208ENST00000367042 ROCK2O75116 1388 aaKnown RBP10.83□□□□□ -0.68
CD46-208ENST00000367042 CARMIL2Q6F5E8 1435 aa10.83□□□□□ -0.68
CD46-208ENST00000367042 ROCK1Q13464 1354 aa10.83□□□□□ -0.68
CD46-208ENST00000367042 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
CD46-208ENST00000367042 RALBP1Q15311 655 aa10.83□□□□□ -0.68
CD46-208ENST00000367042 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
CD46-208ENST00000367042 ADCY10Q96PN6 1610 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms