RNA–Protein interactions for RNA: ENST00000361786.6

CIPC-201, Transcript of CLOCK interacting pacemaker, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIPC, Length 4,486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-201ENST00000361786 NUTM2DQ5VT03 806 aaPredicted RBP18.15■□□□□ 0.5
CIPC-201ENST00000361786 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
CIPC-201ENST00000361786 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
CIPC-201ENST00000361786 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
CIPC-201ENST00000361786 HDGFP51858 240 aaKnown RBP18.12■□□□□ 0.49
CIPC-201ENST00000361786 NBR1Q14596 966 aa18.12■□□□□ 0.49
CIPC-201ENST00000361786 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
CIPC-201ENST00000361786 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
CIPC-201ENST00000361786 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.49
CIPC-201ENST00000361786 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
CIPC-201ENST00000361786 NUDCQ9Y266 331 aa18.06■□□□□ 0.48
CIPC-201ENST00000361786 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
CIPC-201ENST00000361786 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
CIPC-201ENST00000361786 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
CIPC-201ENST00000361786 ARXQ96QS3 562 aa18.01■□□□□ 0.47
CIPC-201ENST00000361786 UPF2Q9HAU5 1272 aaKnown RBP18.01■□□□□ 0.47
CIPC-201ENST00000361786 HSP90AA1P07900 732 aaKnown RBP18■□□□□ 0.47
CIPC-201ENST00000361786 MORC1Q86VD1 984 aa18■□□□□ 0.47
CIPC-201ENST00000361786 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
CIPC-201ENST00000361786 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
CIPC-201ENST00000361786 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
CIPC-201ENST00000361786 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
CIPC-201ENST00000361786 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
CIPC-201ENST00000361786 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
CIPC-201ENST00000361786 POLA1P09884 1462 aaPredicted RBP17.96■□□□□ 0.47
CIPC-201ENST00000361786 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.46
CIPC-201ENST00000361786 MYH16Q9H6N6 1097 aa17.95■□□□□ 0.46
CIPC-201ENST00000361786 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
CIPC-201ENST00000361786 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
CIPC-201ENST00000361786 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
CIPC-201ENST00000361786 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
CIPC-201ENST00000361786 CUX1P39880 1505 aa17.92■□□□□ 0.46
CIPC-201ENST00000361786 KIF21BO75037 1637 aa17.92■□□□□ 0.46
CIPC-201ENST00000361786 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
CIPC-201ENST00000361786 AFAP1Q8N556 730 aa17.92■□□□□ 0.46
CIPC-201ENST00000361786 ST20-MTHFSA0A0A6YYL1 179 aa17.91■□□□□ 0.46
CIPC-201ENST00000361786 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
CIPC-201ENST00000361786 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
CIPC-201ENST00000361786 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
CIPC-201ENST00000361786 PRG4Q92954 1404 aaPredicted RBP17.89■□□□□ 0.45
CIPC-201ENST00000361786 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
CIPC-201ENST00000361786 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
CIPC-201ENST00000361786 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
CIPC-201ENST00000361786 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
CIPC-201ENST00000361786 U2AF1L5P0DN76 240 aaPredicted RBP17.85■□□□□ 0.45
CIPC-201ENST00000361786 U2AF1Q01081 240 aaKnown RBP eCLIP17.85■□□□□ 0.45
CIPC-201ENST00000361786 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
CIPC-201ENST00000361786 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
CIPC-201ENST00000361786 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
CIPC-201ENST00000361786 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
CIPC-201ENST00000361786 GLIPR1L2Q4G1C9 344 aa17.83■□□□□ 0.45
CIPC-201ENST00000361786 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.44
CIPC-201ENST00000361786 KIF15Q9NS87 1388 aa17.83■□□□□ 0.44
CIPC-201ENST00000361786 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
CIPC-201ENST00000361786 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
CIPC-201ENST00000361786 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
CIPC-201ENST00000361786 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
CIPC-201ENST00000361786 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
CIPC-201ENST00000361786 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
CIPC-201ENST00000361786 RGS3P49796 1198 aa17.78■□□□□ 0.44
CIPC-201ENST00000361786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.44
CIPC-201ENST00000361786 NCOA2Q15596 1464 aa17.78■□□□□ 0.44
CIPC-201ENST00000361786 VGFO15240 615 aaPredicted RBP17.78■□□□□ 0.44
CIPC-201ENST00000361786 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
CIPC-201ENST00000361786 TERF2IPQ9NYB0 399 aa17.77■□□□□ 0.43
CIPC-201ENST00000361786 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
CIPC-201ENST00000361786 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
CIPC-201ENST00000361786 RALBP1Q15311 655 aa17.76■□□□□ 0.43
CIPC-201ENST00000361786 PANK3Q9H999 370 aa17.74■□□□□ 0.43
CIPC-201ENST00000361786 ANKRD50Q9ULJ7 1429 aa17.74■□□□□ 0.43
CIPC-201ENST00000361786 MINK1Q8N4C8 1332 aaPredicted RBP17.73■□□□□ 0.43
CIPC-201ENST00000361786 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
CIPC-201ENST00000361786 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
CIPC-201ENST00000361786 SYNJ2O15056 1496 aa17.72■□□□□ 0.43
CIPC-201ENST00000361786 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
CIPC-201ENST00000361786 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
CIPC-201ENST00000361786 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
CIPC-201ENST00000361786 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
CIPC-201ENST00000361786 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
CIPC-201ENST00000361786 USP47Q96K76 1375 aa17.69■□□□□ 0.42
CIPC-201ENST00000361786 RAPGEF3O95398 923 aa17.68■□□□□ 0.42
CIPC-201ENST00000361786 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
CIPC-201ENST00000361786 RBM19Q9Y4C8 960 aaKnown RBP17.66■□□□□ 0.42
CIPC-201ENST00000361786 RTN4Q9NQC3 1192 aaKnown RBP17.66■□□□□ 0.42
CIPC-201ENST00000361786 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
CIPC-201ENST00000361786 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
CIPC-201ENST00000361786 NPHP1O15259 732 aa17.65■□□□□ 0.42
CIPC-201ENST00000361786 ANP32BQ92688 251 aaKnown RBP17.64■□□□□ 0.41
CIPC-201ENST00000361786 UACAQ9BZF9 1416 aa17.64■□□□□ 0.41
CIPC-201ENST00000361786 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
CIPC-201ENST00000361786 AMPHP49418 695 aa17.64■□□□□ 0.41
CIPC-201ENST00000361786 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
CIPC-201ENST00000361786 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
CIPC-201ENST00000361786 SCAPERQ9BY12 1400 aa17.62■□□□□ 0.41
CIPC-201ENST00000361786 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
CIPC-201ENST00000361786 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
CIPC-201ENST00000361786 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
CIPC-201ENST00000361786 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
CIPC-201ENST00000361786 MS4A1P11836 297 aa17.61■□□□□ 0.41
CIPC-201ENST00000361786 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms