RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 TIAM1Q13009 1591 aa7.61□□□□□ -1.19
PCDH11X-202ENST00000361655 DHX57Q6P158 1386 aaKnown RBP7.6□□□□□ -1.19
PCDH11X-202ENST00000361655 RAPGEF3O95398 923 aa7.6□□□□□ -1.19
PCDH11X-202ENST00000361655 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
PCDH11X-202ENST00000361655 PLEKHG5O94827 1062 aa7.6□□□□□ -1.19
PCDH11X-202ENST00000361655 TROQ12816 1431 aaPredicted RBP7.6□□□□□ -1.19
PCDH11X-202ENST00000361655 WASHC2CQ9Y4E1 1318 aa7.6□□□□□ -1.19
PCDH11X-202ENST00000361655 L3MBTL2Q969R5 705 aa7.59□□□□□ -1.19
PCDH11X-202ENST00000361655 KANK1Q14678 1352 aa7.59□□□□□ -1.19
PCDH11X-202ENST00000361655 NEFLP07196 543 aa7.59□□□□□ -1.19
PCDH11X-202ENST00000361655 ADAMTS12P58397 1594 aa7.58□□□□□ -1.2
PCDH11X-202ENST00000361655 TARBP1Q13395 1621 aaKnown RBP7.58□□□□□ -1.2
PCDH11X-202ENST00000361655 SAFB2Q14151 953 aaKnown RBP eCLIP7.58□□□□□ -1.2
PCDH11X-202ENST00000361655 CLSPNQ9HAW4 1339 aa7.58□□□□□ -1.2
PCDH11X-202ENST00000361655 ARHGEF11O15085 1522 aa7.58□□□□□ -1.2
PCDH11X-202ENST00000361655 ARHGAP5Q13017 1502 aa7.57□□□□□ -1.2
PCDH11X-202ENST00000361655 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
PCDH11X-202ENST00000361655 SALL2Q9Y467 1007 aaPredicted RBP7.57□□□□□ -1.2
PCDH11X-202ENST00000361655 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
PCDH11X-202ENST00000361655 HECW1Q76N89 1606 aa7.57□□□□□ -1.2
PCDH11X-202ENST00000361655 FAM9BQ8IZU0 186 aa7.57□□□□□ -1.2
PCDH11X-202ENST00000361655 ABCA5Q8WWZ7 1642 aa7.56□□□□□ -1.2
PCDH11X-202ENST00000361655 RRBP1Q9P2E9 1410 aaKnown RBP7.56□□□□□ -1.2
PCDH11X-202ENST00000361655 STK26Q9P289 416 aa7.55□□□□□ -1.2
PCDH11X-202ENST00000361655 PBRM1Q86U86 1689 aa7.55□□□□□ -1.2
PCDH11X-202ENST00000361655 SCAPERQ9BY12 1400 aa7.54□□□□□ -1.2
PCDH11X-202ENST00000361655 ACIN1Q9UKV3 1341 aaKnown RBP7.54□□□□□ -1.2
PCDH11X-202ENST00000361655 EHBP1L1Q8N3D4 1523 aa7.54□□□□□ -1.2
PCDH11X-202ENST00000361655 THOC2Q8NI27 1593 aaKnown RBP7.54□□□□□ -1.2
PCDH11X-202ENST00000361655 HSPA5P11021 654 aaKnown RBP7.54□□□□□ -1.2
PCDH11X-202ENST00000361655 ANKRD50Q9ULJ7 1429 aa7.53□□□□□ -1.2
PCDH11X-202ENST00000361655 ATP10BO94823 1461 aa7.53□□□□□ -1.2
PCDH11X-202ENST00000361655 PELP1Q8IZL8 1130 aaKnown RBP7.53□□□□□ -1.2
PCDH11X-202ENST00000361655 C14orf37Q86TY3 774 aa7.53□□□□□ -1.2
PCDH11X-202ENST00000361655 NUP153P49790 1475 aaKnown RBP7.52□□□□□ -1.21
PCDH11X-202ENST00000361655 NUP160Q12769 1436 aa7.52□□□□□ -1.21
PCDH11X-202ENST00000361655 CTTNBP2Q8WZ74 1663 aa7.52□□□□□ -1.21
PCDH11X-202ENST00000361655 DISP1Q96F81 1524 aa7.52□□□□□ -1.21
PCDH11X-202ENST00000361655 POGKQ9P215 609 aa7.52□□□□□ -1.21
PCDH11X-202ENST00000361655 SUPT6HQ7KZ85 1726 aaKnown RBP7.51□□□□□ -1.21
PCDH11X-202ENST00000361655 MRS2Q9HD23 443 aa7.51□□□□□ -1.21
PCDH11X-202ENST00000361655 C9orf84Q5VXU9 1444 aa7.51□□□□□ -1.21
PCDH11X-202ENST00000361655 HNRNPUQ00839 825 aaKnown RBP eCLIP7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 CEP170Q5SW79 1584 aa7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 MIA2Q96PC5 1412 aa7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 UGGT2Q9NYU1 1516 aa7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 KIAA0556O60303 1618 aa7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 CD109Q6YHK3 1445 aa7.5□□□□□ -1.21
PCDH11X-202ENST00000361655 DAPK1P53355 1430 aa7.49□□□□□ -1.21
PCDH11X-202ENST00000361655 SLC24A1O60721 1099 aa7.49□□□□□ -1.21
PCDH11X-202ENST00000361655 TNNT2P45379 298 aaPredicted RBP7.49□□□□□ -1.21
PCDH11X-202ENST00000361655 SCAF1Q9H7N4 1312 aaKnown RBP7.49□□□□□ -1.21
PCDH11X-202ENST00000361655 RAPGEF6Q8TEU7 1601 aa7.48□□□□□ -1.21
PCDH11X-202ENST00000361655 CCDC144AA2RUR9 1427 aa7.48□□□□□ -1.21
PCDH11X-202ENST00000361655 ROCK2O75116 1388 aaKnown RBP7.48□□□□□ -1.21
PCDH11X-202ENST00000361655 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 ABCC5O15440 1437 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 NAIPQ13075 1403 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 CAMSAP2Q08AD1 1489 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 ASXL2Q76L83 1435 aa7.47□□□□□ -1.21
PCDH11X-202ENST00000361655 NUTM2FA1L443 756 aa7.46□□□□□ -1.21
PCDH11X-202ENST00000361655 PTPRKQ15262 1439 aa7.46□□□□□ -1.21
PCDH11X-202ENST00000361655 GPATCH8Q9UKJ3 1502 aaKnown RBP7.46□□□□□ -1.21
PCDH11X-202ENST00000361655 ST20-MTHFSA0A0A6YYL1 179 aa7.46□□□□□ -1.21
PCDH11X-202ENST00000361655 PPM1GO15355 546 aaPredicted RBP7.46□□□□□ -1.21
PCDH11X-202ENST00000361655 HFM1A2PYH4 1435 aa7.46□□□□□ -1.22
PCDH11X-202ENST00000361655 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.22
PCDH11X-202ENST00000361655 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
PCDH11X-202ENST00000361655 MAP3K1Q13233 1512 aa7.45□□□□□ -1.22
PCDH11X-202ENST00000361655 KNSTRNQ9Y448 316 aa7.45□□□□□ -1.22
PCDH11X-202ENST00000361655 SOX12O15370 315 aa7.45□□□□□ -1.22
PCDH11X-202ENST00000361655 TMF1P82094 1093 aa7.45□□□□□ -1.22
PCDH11X-202ENST00000361655 LMOD2Q6P5Q4 547 aa7.45□□□□□ -1.22
PCDH11X-202ENST00000361655 KIF14Q15058 1648 aa7.44□□□□□ -1.22
PCDH11X-202ENST00000361655 ADGRL1O94910 1474 aa7.44□□□□□ -1.22
PCDH11X-202ENST00000361655 TMEM132EQ6IEE7 984 aa7.43□□□□□ -1.22
PCDH11X-202ENST00000361655 FANCAO15360 1455 aa7.43□□□□□ -1.22
PCDH11X-202ENST00000361655 HDGFP51858 240 aaKnown RBP7.43□□□□□ -1.22
PCDH11X-202ENST00000361655 NCOA1Q15788 1441 aa7.43□□□□□ -1.22
PCDH11X-202ENST00000361655 CHD1O14646 1710 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 CDCA8Q53HL2 280 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 ERCC6L2Q5T890 1561 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 CCDC141Q6ZP82 1450 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 NEFMP07197 916 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 NBPF8Q3BBV2 869 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 WDR43Q15061 677 aaKnown RBP eCLIP7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 NBPF1Q3BBV0 1214 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 BCL11AQ9H165 835 aa7.42□□□□□ -1.22
PCDH11X-202ENST00000361655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.41□□□□□ -1.22
PCDH11X-202ENST00000361655 PLEKHH2Q8IVE3 1493 aa7.41□□□□□ -1.22
PCDH11X-202ENST00000361655 SAMD9Q5K651 1589 aa7.41□□□□□ -1.22
PCDH11X-202ENST00000361655 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
PCDH11X-202ENST00000361655 CFAP70Q5T0N1 1121 aa7.41□□□□□ -1.22
PCDH11X-202ENST00000361655 CEBPAP49715 358 aaPredicted RBP7.4□□□□□ -1.22
PCDH11X-202ENST00000361655 EID1Q9Y6B2 187 aa7.4□□□□□ -1.22
PCDH11X-202ENST00000361655 MAGI3Q5TCQ9 1506 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms