RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 CCDC7Q96M83 1385 aa15.8■□□□□ 0.12
EPHB4-202ENST00000360620 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
EPHB4-202ENST00000360620 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
EPHB4-202ENST00000360620 PKD2Q13563 968 aa15.78■□□□□ 0.12
EPHB4-202ENST00000360620 TCERG1O14776 1098 aaKnown RBP15.78■□□□□ 0.12
EPHB4-202ENST00000360620 PRDM2Q13029 1718 aa15.77■□□□□ 0.12
EPHB4-202ENST00000360620 CASKIN1Q8WXD9 1431 aa15.76■□□□□ 0.11
EPHB4-202ENST00000360620 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
EPHB4-202ENST00000360620 DCAF11Q8TEB1 546 aa15.76■□□□□ 0.11
EPHB4-202ENST00000360620 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
EPHB4-202ENST00000360620 CC2D1BQ5T0F9 858 aaKnown RBP15.75■□□□□ 0.11
EPHB4-202ENST00000360620 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
EPHB4-202ENST00000360620 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
EPHB4-202ENST00000360620 ARXQ96QS3 562 aa15.74■□□□□ 0.11
EPHB4-202ENST00000360620 RGS3P49796 1198 aa15.74■□□□□ 0.11
EPHB4-202ENST00000360620 HFM1A2PYH4 1435 aa15.73■□□□□ 0.11
EPHB4-202ENST00000360620 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
EPHB4-202ENST00000360620 FYCO1Q9BQS8 1478 aa15.72■□□□□ 0.11
EPHB4-202ENST00000360620 SLC24A1O60721 1099 aa15.72■□□□□ 0.11
EPHB4-202ENST00000360620 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.1
EPHB4-202ENST00000360620 EXOC6Q8TAG9 804 aa15.7■□□□□ 0.1
EPHB4-202ENST00000360620 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
EPHB4-202ENST00000360620 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
EPHB4-202ENST00000360620 RALBP1Q15311 655 aa15.7■□□□□ 0.1
EPHB4-202ENST00000360620 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
EPHB4-202ENST00000360620 PDE4AP27815 886 aa15.69■□□□□ 0.1
EPHB4-202ENST00000360620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.68■□□□□ 0.1
EPHB4-202ENST00000360620 USP47Q96K76 1375 aa15.68■□□□□ 0.1
EPHB4-202ENST00000360620 AKNAQ7Z591 1439 aa15.67■□□□□ 0.1
EPHB4-202ENST00000360620 RRP1P56182 461 aaKnown RBP15.67■□□□□ 0.1
EPHB4-202ENST00000360620 NAIPQ13075 1403 aa15.67■□□□□ 0.1
EPHB4-202ENST00000360620 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
EPHB4-202ENST00000360620 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
EPHB4-202ENST00000360620 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
EPHB4-202ENST00000360620 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-202ENST00000360620 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
EPHB4-202ENST00000360620 NLRP13Q86W25 1043 aa15.65■□□□□ 0.1
EPHB4-202ENST00000360620 ST20-MTHFSA0A0A6YYL1 179 aa15.65■□□□□ 0.1
EPHB4-202ENST00000360620 C11orf95C9JLR9 678 aaPredicted RBP15.65■□□□□ 0.1
EPHB4-202ENST00000360620 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
EPHB4-202ENST00000360620 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
EPHB4-202ENST00000360620 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
EPHB4-202ENST00000360620 NUP155O75694 1391 aa15.63■□□□□ 0.09
EPHB4-202ENST00000360620 KIF15Q9NS87 1388 aa15.63■□□□□ 0.09
EPHB4-202ENST00000360620 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.63■□□□□ 0.09
EPHB4-202ENST00000360620 MYBBP1AQ9BQG0 1328 aaKnown RBP15.63■□□□□ 0.09
EPHB4-202ENST00000360620 PLIN1O60240 522 aa15.62■□□□□ 0.09
EPHB4-202ENST00000360620 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
EPHB4-202ENST00000360620 BECN1Q14457 450 aa15.62■□□□□ 0.09
EPHB4-202ENST00000360620 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
EPHB4-202ENST00000360620 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
EPHB4-202ENST00000360620 TMF1P82094 1093 aa15.58■□□□□ 0.09
EPHB4-202ENST00000360620 ANKRD30AQ9BXX3 1397 aa15.58■□□□□ 0.08
EPHB4-202ENST00000360620 SLC4A3P48751 1232 aa15.58■□□□□ 0.08
EPHB4-202ENST00000360620 JPH4Q96JJ6 628 aa15.57■□□□□ 0.08
EPHB4-202ENST00000360620 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
EPHB4-202ENST00000360620 MS4A1P11836 297 aa15.55■□□□□ 0.08
EPHB4-202ENST00000360620 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
EPHB4-202ENST00000360620 HSP90AA1P07900 732 aaKnown RBP15.55■□□□□ 0.08
EPHB4-202ENST00000360620 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
EPHB4-202ENST00000360620 CRBNQ96SW2 442 aa15.54■□□□□ 0.08
EPHB4-202ENST00000360620 PNISRQ8TF01 805 aaKnown RBP15.54■□□□□ 0.08
EPHB4-202ENST00000360620 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
EPHB4-202ENST00000360620 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
EPHB4-202ENST00000360620 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
EPHB4-202ENST00000360620 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
EPHB4-202ENST00000360620 PTPRKQ15262 1439 aa15.52■□□□□ 0.08
EPHB4-202ENST00000360620 IL27Q8NEV9 243 aa15.52■□□□□ 0.07
EPHB4-202ENST00000360620 GSE1Q14687 1217 aa15.51■□□□□ 0.07
EPHB4-202ENST00000360620 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
EPHB4-202ENST00000360620 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
EPHB4-202ENST00000360620 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
EPHB4-202ENST00000360620 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
EPHB4-202ENST00000360620 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
EPHB4-202ENST00000360620 EHBP1L1Q8N3D4 1523 aa15.49■□□□□ 0.07
EPHB4-202ENST00000360620 HNRNPMP52272 730 aaKnown RBP eCLIP15.48■□□□□ 0.07
EPHB4-202ENST00000360620 GLIPR1L2Q4G1C9 344 aa15.48■□□□□ 0.07
EPHB4-202ENST00000360620 SLKQ9H2G2 1235 aaPredicted RBP15.48■□□□□ 0.07
EPHB4-202ENST00000360620 ANO8Q9HCE9 1232 aaPredicted RBP15.48■□□□□ 0.07
EPHB4-202ENST00000360620 GOLGA2Q08379 1002 aa15.47■□□□□ 0.07
EPHB4-202ENST00000360620 PANK3Q9H999 370 aa15.47■□□□□ 0.07
EPHB4-202ENST00000360620 BRD4O60885 1362 aaPredicted RBP15.47■□□□□ 0.07
EPHB4-202ENST00000360620 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
EPHB4-202ENST00000360620 FAM161AQ3B820 660 aa15.46■□□□□ 0.06
EPHB4-202ENST00000360620 CENPQQ7L2Z9 268 aaPredicted RBP15.46■□□□□ 0.06
EPHB4-202ENST00000360620 ANP32BQ92688 251 aaKnown RBP15.45■□□□□ 0.06
EPHB4-202ENST00000360620 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
EPHB4-202ENST00000360620 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
EPHB4-202ENST00000360620 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
EPHB4-202ENST00000360620 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
EPHB4-202ENST00000360620 TNNT2P45379 298 aaPredicted RBP15.43■□□□□ 0.06
EPHB4-202ENST00000360620 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
EPHB4-202ENST00000360620 CDK13Q14004 1512 aaKnown RBP15.42■□□□□ 0.06
EPHB4-202ENST00000360620 SPRYD3Q8NCJ5 442 aa15.41■□□□□ 0.06
EPHB4-202ENST00000360620 NAP1L5Q96NT1 182 aaPredicted RBP15.4■□□□□ 0.06
EPHB4-202ENST00000360620 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
EPHB4-202ENST00000360620 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
EPHB4-202ENST00000360620 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
EPHB4-202ENST00000360620 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
EPHB4-202ENST00000360620 LAMC3Q9Y6N6 1575 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms