RNA–Protein interactions for RNA: ENST00000360356.6

PARP9-201, Transcript of poly(ADP-ribose) polymerase family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PARP9, Length 3,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9-201ENST00000360356 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.5
PARP9-201ENST00000360356 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
PARP9-201ENST00000360356 NCOA1Q15788 1441 aa11.93□□□□□ -0.5
PARP9-201ENST00000360356 GSE1Q14687 1217 aa11.92□□□□□ -0.5
PARP9-201ENST00000360356 MIA2Q96PC5 1412 aa11.91□□□□□ -0.5
PARP9-201ENST00000360356 RANGAP1P46060 587 aaPredicted RBP11.91□□□□□ -0.5
PARP9-201ENST00000360356 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
PARP9-201ENST00000360356 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
PARP9-201ENST00000360356 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
PARP9-201ENST00000360356 FAM43AQ8N2R8 423 aa11.9□□□□□ -0.5
PARP9-201ENST00000360356 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
PARP9-201ENST00000360356 RBM10P98175 930 aaKnown RBP11.89□□□□□ -0.51
PARP9-201ENST00000360356 FAM50AQ14320 339 aaKnown RBP11.89□□□□□ -0.51
PARP9-201ENST00000360356 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
PARP9-201ENST00000360356 FANCD2Q9BXW9 1451 aa11.88□□□□□ -0.51
PARP9-201ENST00000360356 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
PARP9-201ENST00000360356 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
PARP9-201ENST00000360356 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
PARP9-201ENST00000360356 ROCK1Q13464 1354 aa11.87□□□□□ -0.51
PARP9-201ENST00000360356 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
PARP9-201ENST00000360356 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
PARP9-201ENST00000360356 FRAT1Q92837 279 aaPredicted RBP11.86□□□□□ -0.51
PARP9-201ENST00000360356 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
PARP9-201ENST00000360356 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
PARP9-201ENST00000360356 FGD1P98174 961 aa11.85□□□□□ -0.51
PARP9-201ENST00000360356 PDE4CQ08493 712 aa11.85□□□□□ -0.51
PARP9-201ENST00000360356 AAMPQ13685 434 aa11.85□□□□□ -0.51
PARP9-201ENST00000360356 MTUS2Q5JR59 1369 aa11.85□□□□□ -0.51
PARP9-201ENST00000360356 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
PARP9-201ENST00000360356 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
PARP9-201ENST00000360356 TEX14Q8IWB6 1497 aa11.84□□□□□ -0.51
PARP9-201ENST00000360356 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
PARP9-201ENST00000360356 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
PARP9-201ENST00000360356 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
PARP9-201ENST00000360356 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
PARP9-201ENST00000360356 NESP48681 1621 aa11.82□□□□□ -0.52
PARP9-201ENST00000360356 KIF14Q15058 1648 aa11.82□□□□□ -0.52
PARP9-201ENST00000360356 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
PARP9-201ENST00000360356 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
PARP9-201ENST00000360356 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
PARP9-201ENST00000360356 ZMYM4Q5VZL5 1548 aa11.8□□□□□ -0.52
PARP9-201ENST00000360356 RRP9O43818 475 aaKnown RBP11.8□□□□□ -0.52
PARP9-201ENST00000360356 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
PARP9-201ENST00000360356 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
PARP9-201ENST00000360356 MAGI3Q5TCQ9 1506 aa11.78□□□□□ -0.52
PARP9-201ENST00000360356 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
PARP9-201ENST00000360356 NAP1L5Q96NT1 182 aaPredicted RBP11.78□□□□□ -0.52
PARP9-201ENST00000360356 PRKRIP1Q9H875 184 aaPredicted RBP11.78□□□□□ -0.52
PARP9-201ENST00000360356 WDR62O43379 1518 aa11.77□□□□□ -0.52
PARP9-201ENST00000360356 INSRP06213 1382 aa11.77□□□□□ -0.53
PARP9-201ENST00000360356 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.53
PARP9-201ENST00000360356 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
PARP9-201ENST00000360356 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
PARP9-201ENST00000360356 E9PCH4 1651 aa11.76□□□□□ -0.53
PARP9-201ENST00000360356 CROCC2H7BZ55 1655 aa11.76□□□□□ -0.53
PARP9-201ENST00000360356 KDM6BO15054 1643 aa11.76□□□□□ -0.53
PARP9-201ENST00000360356 ROCK2O75116 1388 aaKnown RBP11.75□□□□□ -0.53
PARP9-201ENST00000360356 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
PARP9-201ENST00000360356 ITSN2Q9NZM3 1697 aa11.75□□□□□ -0.53
PARP9-201ENST00000360356 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
PARP9-201ENST00000360356 ADCY10Q96PN6 1610 aa11.74□□□□□ -0.53
PARP9-201ENST00000360356 KDM5CP41229 1560 aa11.74□□□□□ -0.53
PARP9-201ENST00000360356 BCL11BQ9C0K0 894 aaPredicted RBP11.74□□□□□ -0.53
PARP9-201ENST00000360356 EPRSP07814 1512 aaKnown RBP11.74□□□□□ -0.53
PARP9-201ENST00000360356 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
PARP9-201ENST00000360356 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
PARP9-201ENST00000360356 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
PARP9-201ENST00000360356 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
PARP9-201ENST00000360356 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
PARP9-201ENST00000360356 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
PARP9-201ENST00000360356 GAPVD1Q14C86 1478 aa11.72□□□□□ -0.53
PARP9-201ENST00000360356 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
PARP9-201ENST00000360356 DHX29Q7Z478 1369 aaKnown RBP11.7□□□□□ -0.54
PARP9-201ENST00000360356 DAPK1P53355 1430 aa11.7□□□□□ -0.54
PARP9-201ENST00000360356 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
PARP9-201ENST00000360356 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
PARP9-201ENST00000360356 ADAMTS12P58397 1594 aa11.7□□□□□ -0.54
PARP9-201ENST00000360356 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
PARP9-201ENST00000360356 LAMC1P11047 1609 aa11.68□□□□□ -0.54
PARP9-201ENST00000360356 RALGAPBQ86X10 1494 aa11.68□□□□□ -0.54
PARP9-201ENST00000360356 AEBP2Q6ZN18 517 aaPredicted RBP11.68□□□□□ -0.54
PARP9-201ENST00000360356 BCORL1Q5H9F3 1711 aa11.67□□□□□ -0.54
PARP9-201ENST00000360356 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
PARP9-201ENST00000360356 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
PARP9-201ENST00000360356 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
PARP9-201ENST00000360356 PDE4AP27815 886 aa11.67□□□□□ -0.54
PARP9-201ENST00000360356 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
PARP9-201ENST00000360356 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
PARP9-201ENST00000360356 SLC4A3P48751 1232 aa11.65□□□□□ -0.54
PARP9-201ENST00000360356 RGS3P49796 1198 aa11.65□□□□□ -0.54
PARP9-201ENST00000360356 FAM9BQ8IZU0 186 aa11.65□□□□□ -0.54
PARP9-201ENST00000360356 PZPP20742 1482 aa11.65□□□□□ -0.54
PARP9-201ENST00000360356 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
PARP9-201ENST00000360356 MS4A1P11836 297 aa11.64□□□□□ -0.55
PARP9-201ENST00000360356 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
PARP9-201ENST00000360356 ABCC5O15440 1437 aa11.63□□□□□ -0.55
PARP9-201ENST00000360356 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
PARP9-201ENST00000360356 CCDC184Q52MB2 194 aa11.63□□□□□ -0.55
PARP9-201ENST00000360356 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
PARP9-201ENST00000360356 PRDM4Q9UKN5 801 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms