RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 KDM6BO15054 1643 aa13.48□□□□□ -0.25
TRAPPC2-201ENST00000359680 POLR1AO95602 1720 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC2-201ENST00000359680 ANP32AP39687 249 aaKnown RBP13.48□□□□□ -0.25
TRAPPC2-201ENST00000359680 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
TRAPPC2-201ENST00000359680 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
TRAPPC2-201ENST00000359680 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
TRAPPC2-201ENST00000359680 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
TRAPPC2-201ENST00000359680 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC2-201ENST00000359680 FOXD1Q16676 465 aa13.47□□□□□ -0.25
TRAPPC2-201ENST00000359680 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
TRAPPC2-201ENST00000359680 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
TRAPPC2-201ENST00000359680 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
TRAPPC2-201ENST00000359680 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
TRAPPC2-201ENST00000359680 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
TRAPPC2-201ENST00000359680 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC2-201ENST00000359680 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
TRAPPC2-201ENST00000359680 MIA2Q96PC5 1412 aa13.43□□□□□ -0.26
TRAPPC2-201ENST00000359680 TEX14Q8IWB6 1497 aa13.42□□□□□ -0.26
TRAPPC2-201ENST00000359680 SPATA31E1Q6ZUB1 1445 aa13.42□□□□□ -0.26
TRAPPC2-201ENST00000359680 ANKRD30BQ9BXX2 1392 aa13.42□□□□□ -0.26
TRAPPC2-201ENST00000359680 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC2-201ENST00000359680 ADRA2BP18089 450 aa13.41□□□□□ -0.26
TRAPPC2-201ENST00000359680 RNF123Q5XPI4 1314 aa13.4□□□□□ -0.26
TRAPPC2-201ENST00000359680 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC2-201ENST00000359680 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
TRAPPC2-201ENST00000359680 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.27
TRAPPC2-201ENST00000359680 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
TRAPPC2-201ENST00000359680 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
TRAPPC2-201ENST00000359680 NESP48681 1621 aa13.38□□□□□ -0.27
TRAPPC2-201ENST00000359680 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
TRAPPC2-201ENST00000359680 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
TRAPPC2-201ENST00000359680 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
TRAPPC2-201ENST00000359680 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
TRAPPC2-201ENST00000359680 DAPK1P53355 1430 aa13.35□□□□□ -0.27
TRAPPC2-201ENST00000359680 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
TRAPPC2-201ENST00000359680 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
TRAPPC2-201ENST00000359680 TMC1Q8TDI8 760 aa13.33□□□□□ -0.27
TRAPPC2-201ENST00000359680 USP47Q96K76 1375 aa13.33□□□□□ -0.28
TRAPPC2-201ENST00000359680 DNMT1P26358 1616 aaKnown RBP13.32□□□□□ -0.28
TRAPPC2-201ENST00000359680 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
TRAPPC2-201ENST00000359680 KCNA4P22459 653 aa13.32□□□□□ -0.28
TRAPPC2-201ENST00000359680 ARID4BQ4LE39 1312 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC2-201ENST00000359680 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
TRAPPC2-201ENST00000359680 BCORL1Q5H9F3 1711 aa13.31□□□□□ -0.28
TRAPPC2-201ENST00000359680 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
TRAPPC2-201ENST00000359680 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
TRAPPC2-201ENST00000359680 ABCC5O15440 1437 aa13.3□□□□□ -0.28
TRAPPC2-201ENST00000359680 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
TRAPPC2-201ENST00000359680 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
TRAPPC2-201ENST00000359680 WDR62O43379 1518 aa13.29□□□□□ -0.28
TRAPPC2-201ENST00000359680 IQGAP2Q13576 1575 aa13.29□□□□□ -0.28
TRAPPC2-201ENST00000359680 KIF14Q15058 1648 aa13.28□□□□□ -0.28
TRAPPC2-201ENST00000359680 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
TRAPPC2-201ENST00000359680 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.28
TRAPPC2-201ENST00000359680 KDM5CP41229 1560 aa13.27□□□□□ -0.29
TRAPPC2-201ENST00000359680 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
TRAPPC2-201ENST00000359680 PZPP20742 1482 aa13.26□□□□□ -0.29
TRAPPC2-201ENST00000359680 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
TRAPPC2-201ENST00000359680 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC2-201ENST00000359680 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
TRAPPC2-201ENST00000359680 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
TRAPPC2-201ENST00000359680 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC2-201ENST00000359680 LRPPRCP42704 1394 aaKnown RBP13.24□□□□□ -0.29
TRAPPC2-201ENST00000359680 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
TRAPPC2-201ENST00000359680 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
TRAPPC2-201ENST00000359680 NEFMP07197 916 aa13.23□□□□□ -0.29
TRAPPC2-201ENST00000359680 PDE4AP27815 886 aa13.23□□□□□ -0.29
TRAPPC2-201ENST00000359680 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
TRAPPC2-201ENST00000359680 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
TRAPPC2-201ENST00000359680 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
TRAPPC2-201ENST00000359680 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
TRAPPC2-201ENST00000359680 RALBP1Q15311 655 aa13.21□□□□□ -0.29
TRAPPC2-201ENST00000359680 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
TRAPPC2-201ENST00000359680 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.29
TRAPPC2-201ENST00000359680 MS4A1P11836 297 aa13.21□□□□□ -0.29
TRAPPC2-201ENST00000359680 PKD2Q13563 968 aa13.21□□□□□ -0.29
TRAPPC2-201ENST00000359680 RALGAPBQ86X10 1494 aa13.2□□□□□ -0.3
TRAPPC2-201ENST00000359680 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC2-201ENST00000359680 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
TRAPPC2-201ENST00000359680 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
TRAPPC2-201ENST00000359680 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
TRAPPC2-201ENST00000359680 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC2-201ENST00000359680 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
TRAPPC2-201ENST00000359680 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
TRAPPC2-201ENST00000359680 UHRF1BP1Q6BDS2 1440 aa13.18□□□□□ -0.3
TRAPPC2-201ENST00000359680 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
TRAPPC2-201ENST00000359680 ANO8Q9HCE9 1232 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC2-201ENST00000359680 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC2-201ENST00000359680 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
TRAPPC2-201ENST00000359680 CFDP1Q9UEE9 299 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC2-201ENST00000359680 ITSN2Q9NZM3 1697 aa13.16□□□□□ -0.3
TRAPPC2-201ENST00000359680 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
TRAPPC2-201ENST00000359680 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
TRAPPC2-201ENST00000359680 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
TRAPPC2-201ENST00000359680 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
TRAPPC2-201ENST00000359680 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
TRAPPC2-201ENST00000359680 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
TRAPPC2-201ENST00000359680 RTN4Q9NQC3 1192 aaKnown RBP13.15□□□□□ -0.3
TRAPPC2-201ENST00000359680 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
TRAPPC2-201ENST00000359680 ADGRL2O95490 1459 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms