RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
CD46-204ENST00000357714 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
CD46-204ENST00000357714 FANCD2Q9BXW9 1451 aa10.32□□□□□ -0.76
CD46-204ENST00000357714 DENND4BO75064 1496 aaPredicted RBP10.32□□□□□ -0.76
CD46-204ENST00000357714 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
CD46-204ENST00000357714 ABCA10Q8WWZ4 1543 aa10.31□□□□□ -0.76
CD46-204ENST00000357714 EHBP1L1Q8N3D4 1523 aa10.3□□□□□ -0.76
CD46-204ENST00000357714 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
CD46-204ENST00000357714 POLA1P09884 1462 aaPredicted RBP10.3□□□□□ -0.76
CD46-204ENST00000357714 LAS1LQ9Y4W2 734 aaKnown RBP10.29□□□□□ -0.76
CD46-204ENST00000357714 RNF123Q5XPI4 1314 aa10.29□□□□□ -0.76
CD46-204ENST00000357714 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
CD46-204ENST00000357714 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
CD46-204ENST00000357714 KIF21AQ7Z4S6 1674 aa10.28□□□□□ -0.76
CD46-204ENST00000357714 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
CD46-204ENST00000357714 TDRD9Q8NDG6 1382 aaKnown RBP10.28□□□□□ -0.76
CD46-204ENST00000357714 UGGT2Q9NYU1 1516 aa10.28□□□□□ -0.76
CD46-204ENST00000357714 NEFMP07197 916 aa10.27□□□□□ -0.77
CD46-204ENST00000357714 HECW1Q76N89 1606 aa10.27□□□□□ -0.77
CD46-204ENST00000357714 NESP48681 1621 aa10.27□□□□□ -0.77
CD46-204ENST00000357714 RPRD2Q5VT52 1461 aaKnown RBP10.27□□□□□ -0.77
CD46-204ENST00000357714 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
CD46-204ENST00000357714 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
CD46-204ENST00000357714 KDM6BO15054 1643 aa10.26□□□□□ -0.77
CD46-204ENST00000357714 CUL7Q14999 1698 aa10.26□□□□□ -0.77
CD46-204ENST00000357714 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
CD46-204ENST00000357714 TOPBP1Q92547 1522 aa10.26□□□□□ -0.77
CD46-204ENST00000357714 TCERG1O14776 1098 aaKnown RBP10.25□□□□□ -0.77
CD46-204ENST00000357714 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
CD46-204ENST00000357714 DHX29Q7Z478 1369 aaKnown RBP10.25□□□□□ -0.77
CD46-204ENST00000357714 TCOF1Q13428 1488 aaKnown RBP10.25□□□□□ -0.77
CD46-204ENST00000357714 USP47Q96K76 1375 aa10.24□□□□□ -0.77
CD46-204ENST00000357714 PDE4AP27815 886 aa10.24□□□□□ -0.77
CD46-204ENST00000357714 RRP1P56182 461 aaKnown RBP10.24□□□□□ -0.77
CD46-204ENST00000357714 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
CD46-204ENST00000357714 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
CD46-204ENST00000357714 TEX14Q8IWB6 1497 aa10.24□□□□□ -0.77
CD46-204ENST00000357714 MIA2Q96PC5 1412 aa10.23□□□□□ -0.77
CD46-204ENST00000357714 GCC2Q8IWJ2 1684 aa10.23□□□□□ -0.77
CD46-204ENST00000357714 THOC2Q8NI27 1593 aaKnown RBP10.23□□□□□ -0.77
CD46-204ENST00000357714 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
CD46-204ENST00000357714 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
CD46-204ENST00000357714 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
CD46-204ENST00000357714 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
CD46-204ENST00000357714 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.77
CD46-204ENST00000357714 PDS5BQ9NTI5 1447 aa10.21□□□□□ -0.77
CD46-204ENST00000357714 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
CD46-204ENST00000357714 LRRIQ1Q96JM4 1722 aa10.21□□□□□ -0.78
CD46-204ENST00000357714 CARD11Q9BXL7 1154 aa10.2□□□□□ -0.78
CD46-204ENST00000357714 BACH2Q9BYV9 841 aa10.2□□□□□ -0.78
CD46-204ENST00000357714 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
CD46-204ENST00000357714 EIF5BO60841 1220 aaKnown RBP10.19□□□□□ -0.78
CD46-204ENST00000357714 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
CD46-204ENST00000357714 ARID4BQ4LE39 1312 aaPredicted RBP10.19□□□□□ -0.78
CD46-204ENST00000357714 DAPK1P53355 1430 aa10.19□□□□□ -0.78
CD46-204ENST00000357714 ROCK1Q13464 1354 aa10.19□□□□□ -0.78
CD46-204ENST00000357714 EPRSP07814 1512 aaKnown RBP10.19□□□□□ -0.78
CD46-204ENST00000357714 ROCK2O75116 1388 aaKnown RBP10.18□□□□□ -0.78
CD46-204ENST00000357714 KIF15Q9NS87 1388 aa10.18□□□□□ -0.78
CD46-204ENST00000357714 MS4A1P11836 297 aa10.18□□□□□ -0.78
CD46-204ENST00000357714 PKD2Q13563 968 aa10.18□□□□□ -0.78
CD46-204ENST00000357714 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
CD46-204ENST00000357714 MYBBP1AQ9BQG0 1328 aaKnown RBP10.18□□□□□ -0.78
CD46-204ENST00000357714 ABCA5Q8WWZ7 1642 aa10.17□□□□□ -0.78
CD46-204ENST00000357714 ABCC5O15440 1437 aa10.17□□□□□ -0.78
CD46-204ENST00000357714 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
CD46-204ENST00000357714 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
CD46-204ENST00000357714 RALBP1Q15311 655 aa10.17□□□□□ -0.78
CD46-204ENST00000357714 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
CD46-204ENST00000357714 WDR62O43379 1518 aa10.16□□□□□ -0.78
CD46-204ENST00000357714 UBE2Q2Q8WVN8 375 aa10.16□□□□□ -0.78
CD46-204ENST00000357714 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
CD46-204ENST00000357714 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
CD46-204ENST00000357714 ST20-MTHFSA0A0A6YYL1 179 aa10.16□□□□□ -0.78
CD46-204ENST00000357714 PLIN1O60240 522 aa10.15□□□□□ -0.78
CD46-204ENST00000357714 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.79
CD46-204ENST00000357714 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
CD46-204ENST00000357714 SKAP1Q86WV1 359 aa10.14□□□□□ -0.79
CD46-204ENST00000357714 TARBP1Q13395 1621 aaKnown RBP10.14□□□□□ -0.79
CD46-204ENST00000357714 CDCA7LQ96GN5 454 aa10.14□□□□□ -0.79
CD46-204ENST00000357714 MRC2Q9UBG0 1479 aa10.14□□□□□ -0.79
CD46-204ENST00000357714 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
CD46-204ENST00000357714 NLRP13Q86W25 1043 aa10.13□□□□□ -0.79
CD46-204ENST00000357714 KIAA1107Q9UPP5 1409 aa10.13□□□□□ -0.79
CD46-204ENST00000357714 WASHC2CQ9Y4E1 1318 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 GSE1Q14687 1217 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 BRPF3Q9ULD4 1205 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 BCORL1Q5H9F3 1711 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 CRBNQ96SW2 442 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 PZPP20742 1482 aa10.12□□□□□ -0.79
CD46-204ENST00000357714 POLR1AO95602 1720 aaPredicted RBP10.11□□□□□ -0.79
CD46-204ENST00000357714 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
CD46-204ENST00000357714 KTN1Q86UP2 1357 aaKnown RBP10.11□□□□□ -0.79
CD46-204ENST00000357714 NFKBIBQ15653 356 aa10.11□□□□□ -0.79
CD46-204ENST00000357714 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
CD46-204ENST00000357714 NUP155O75694 1391 aa10.08□□□□□ -0.8
CD46-204ENST00000357714 CC2D1BQ5T0F9 858 aaKnown RBP10.08□□□□□ -0.8
CD46-204ENST00000357714 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
CD46-204ENST00000357714 KDM5CP41229 1560 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms