RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
SFPQ-201ENST00000357214 KDM2AQ9Y2K7 1162 aa16.85■□□□□ 0.29
SFPQ-201ENST00000357214 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
SFPQ-201ENST00000357214 ZNF644Q9H582 1327 aaPredicted RBP16.83■□□□□ 0.28
SFPQ-201ENST00000357214 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
SFPQ-201ENST00000357214 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
SFPQ-201ENST00000357214 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
SFPQ-201ENST00000357214 NAIPQ13075 1403 aa16.83■□□□□ 0.28
SFPQ-201ENST00000357214 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
SFPQ-201ENST00000357214 CUL7Q14999 1698 aa16.82■□□□□ 0.28
SFPQ-201ENST00000357214 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
SFPQ-201ENST00000357214 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
SFPQ-201ENST00000357214 JPH4Q96JJ6 628 aa16.77■□□□□ 0.28
SFPQ-201ENST00000357214 PKD2Q13563 968 aa16.75■□□□□ 0.27
SFPQ-201ENST00000357214 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
SFPQ-201ENST00000357214 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
SFPQ-201ENST00000357214 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
SFPQ-201ENST00000357214 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
SFPQ-201ENST00000357214 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
SFPQ-201ENST00000357214 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
SFPQ-201ENST00000357214 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
SFPQ-201ENST00000357214 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
SFPQ-201ENST00000357214 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
SFPQ-201ENST00000357214 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
SFPQ-201ENST00000357214 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
SFPQ-201ENST00000357214 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
SFPQ-201ENST00000357214 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
SFPQ-201ENST00000357214 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
SFPQ-201ENST00000357214 CHGAP10645 457 aaKnown RBP16.69■□□□□ 0.26
SFPQ-201ENST00000357214 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
SFPQ-201ENST00000357214 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
SFPQ-201ENST00000357214 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
SFPQ-201ENST00000357214 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
SFPQ-201ENST00000357214 DAXXQ9UER7 740 aaPredicted RBP16.67■□□□□ 0.26
SFPQ-201ENST00000357214 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
SFPQ-201ENST00000357214 MIA2Q96PC5 1412 aa16.65■□□□□ 0.26
SFPQ-201ENST00000357214 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
SFPQ-201ENST00000357214 NUP155O75694 1391 aa16.64■□□□□ 0.25
SFPQ-201ENST00000357214 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
SFPQ-201ENST00000357214 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.257e-7■■■□□ 16.5
SFPQ-201ENST00000357214 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
SFPQ-201ENST00000357214 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
SFPQ-201ENST00000357214 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
SFPQ-201ENST00000357214 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
SFPQ-201ENST00000357214 ANKRD30AQ9BXX3 1397 aa16.63■□□□□ 0.25
SFPQ-201ENST00000357214 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
SFPQ-201ENST00000357214 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
SFPQ-201ENST00000357214 ANP32AP39687 249 aaKnown RBP16.62■□□□□ 0.25
SFPQ-201ENST00000357214 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
SFPQ-201ENST00000357214 PPP4R2Q9NY27 417 aa16.62■□□□□ 0.25
SFPQ-201ENST00000357214 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
SFPQ-201ENST00000357214 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
SFPQ-201ENST00000357214 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
SFPQ-201ENST00000357214 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
SFPQ-201ENST00000357214 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
SFPQ-201ENST00000357214 ZMYND15Q9H091 742 aa16.59■□□□□ 0.25
SFPQ-201ENST00000357214 DAPK1P53355 1430 aa16.59■□□□□ 0.25
SFPQ-201ENST00000357214 CNTLNQ9NXG0 1405 aa16.58■□□□□ 0.25
SFPQ-201ENST00000357214 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
SFPQ-201ENST00000357214 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
SFPQ-201ENST00000357214 NEFMP07197 916 aa16.56■□□□□ 0.24
SFPQ-201ENST00000357214 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
SFPQ-201ENST00000357214 ABCA5Q8WWZ7 1642 aa16.55■□□□□ 0.24
SFPQ-201ENST00000357214 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
SFPQ-201ENST00000357214 ABCC5O15440 1437 aa16.55■□□□□ 0.24
SFPQ-201ENST00000357214 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
SFPQ-201ENST00000357214 USP47Q96K76 1375 aa16.54■□□□□ 0.24
SFPQ-201ENST00000357214 SAMD9Q5K651 1589 aa16.53■□□□□ 0.24
SFPQ-201ENST00000357214 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
SFPQ-201ENST00000357214 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
SFPQ-201ENST00000357214 ST20-MTHFSA0A0A6YYL1 179 aa16.51■□□□□ 0.23
SFPQ-201ENST00000357214 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
SFPQ-201ENST00000357214 ROCK1Q13464 1354 aa16.5■□□□□ 0.23
SFPQ-201ENST00000357214 WDR62O43379 1518 aa16.5■□□□□ 0.23
SFPQ-201ENST00000357214 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
SFPQ-201ENST00000357214 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
SFPQ-201ENST00000357214 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
SFPQ-201ENST00000357214 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
SFPQ-201ENST00000357214 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
SFPQ-201ENST00000357214 AKNAQ7Z591 1439 aa16.47■□□□□ 0.23
SFPQ-201ENST00000357214 IPO9Q96P70 1041 aaKnown RBP16.46■□□□□ 0.23
SFPQ-201ENST00000357214 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
SFPQ-201ENST00000357214 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.22
SFPQ-201ENST00000357214 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
SFPQ-201ENST00000357214 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
SFPQ-201ENST00000357214 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
SFPQ-201ENST00000357214 PTPRGP23470 1445 aa16.44■□□□□ 0.22
SFPQ-201ENST00000357214 KIAA1107Q9UPP5 1409 aa16.44■□□□□ 0.22
SFPQ-201ENST00000357214 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
SFPQ-201ENST00000357214 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
SFPQ-201ENST00000357214 NUDCQ9Y266 331 aa16.43■□□□□ 0.22
SFPQ-201ENST00000357214 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
SFPQ-201ENST00000357214 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
SFPQ-201ENST00000357214 KIF15Q9NS87 1388 aa16.42■□□□□ 0.22
SFPQ-201ENST00000357214 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
SFPQ-201ENST00000357214 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
SFPQ-201ENST00000357214 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
SFPQ-201ENST00000357214 MLECQ14165 292 aa16.38■□□□□ 0.21
SFPQ-201ENST00000357214 KDM6BO15054 1643 aa16.38■□□□□ 0.21
SFPQ-201ENST00000357214 GGT6Q6P531 493 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms