RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
SIRPA-201ENST00000356025 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
SIRPA-201ENST00000356025 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
SIRPA-201ENST00000356025 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SIRPA-201ENST00000356025 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
SIRPA-201ENST00000356025 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
SIRPA-201ENST00000356025 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SIRPA-201ENST00000356025 ST20-MTHFSA0A0A6YYL1 179 aa16.45■□□□□ 0.22
SIRPA-201ENST00000356025 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
SIRPA-201ENST00000356025 EPRSP07814 1512 aaKnown RBP16.43■□□□□ 0.22
SIRPA-201ENST00000356025 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
SIRPA-201ENST00000356025 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
SIRPA-201ENST00000356025 CCDC7Q96M83 1385 aa16.4■□□□□ 0.22
SIRPA-201ENST00000356025 NBR1Q14596 966 aa16.39■□□□□ 0.21
SIRPA-201ENST00000356025 PPP4R2Q9NY27 417 aa16.37■□□□□ 0.21
SIRPA-201ENST00000356025 ANKRD30AQ9BXX3 1397 aa16.37■□□□□ 0.21
SIRPA-201ENST00000356025 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
SIRPA-201ENST00000356025 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
SIRPA-201ENST00000356025 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
SIRPA-201ENST00000356025 USP47Q96K76 1375 aa16.36■□□□□ 0.21
SIRPA-201ENST00000356025 CUL7Q14999 1698 aa16.35■□□□□ 0.21
SIRPA-201ENST00000356025 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
SIRPA-201ENST00000356025 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
SIRPA-201ENST00000356025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.35■□□□□ 0.21
SIRPA-201ENST00000356025 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
SIRPA-201ENST00000356025 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
SIRPA-201ENST00000356025 DAPK1P53355 1430 aa16.32■□□□□ 0.2
SIRPA-201ENST00000356025 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
SIRPA-201ENST00000356025 MAGI3Q5TCQ9 1506 aa16.32■□□□□ 0.2
SIRPA-201ENST00000356025 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
SIRPA-201ENST00000356025 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
SIRPA-201ENST00000356025 ABCC5O15440 1437 aa16.31■□□□□ 0.2
SIRPA-201ENST00000356025 NBPF1Q3BBV0 1214 aa16.31■□□□□ 0.2
SIRPA-201ENST00000356025 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
SIRPA-201ENST00000356025 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
SIRPA-201ENST00000356025 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
SIRPA-201ENST00000356025 ANKRD30BQ9BXX2 1392 aa16.28■□□□□ 0.2
SIRPA-201ENST00000356025 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
SIRPA-201ENST00000356025 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.19
SIRPA-201ENST00000356025 PTPRGP23470 1445 aa16.27■□□□□ 0.19
SIRPA-201ENST00000356025 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
SIRPA-201ENST00000356025 HECW1Q76N89 1606 aa16.25■□□□□ 0.19
SIRPA-201ENST00000356025 MSH5O43196 834 aa16.24■□□□□ 0.19
SIRPA-201ENST00000356025 PLIN1O60240 522 aa16.24■□□□□ 0.19
SIRPA-201ENST00000356025 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
SIRPA-201ENST00000356025 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
SIRPA-201ENST00000356025 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
SIRPA-201ENST00000356025 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
SIRPA-201ENST00000356025 ANP32AP39687 249 aaKnown RBP16.22■□□□□ 0.19
SIRPA-201ENST00000356025 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
SIRPA-201ENST00000356025 KDM6BO15054 1643 aa16.22■□□□□ 0.19
SIRPA-201ENST00000356025 KIAA0586Q9BVV6 1533 aa16.22■□□□□ 0.19
SIRPA-201ENST00000356025 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
SIRPA-201ENST00000356025 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
SIRPA-201ENST00000356025 AKNAQ7Z591 1439 aa16.21■□□□□ 0.19
SIRPA-201ENST00000356025 NUTM2DQ5VT03 806 aaPredicted RBP16.21■□□□□ 0.19
SIRPA-201ENST00000356025 IFT140Q96RY7 1462 aa16.21■□□□□ 0.18
SIRPA-201ENST00000356025 PANK3Q9H999 370 aa16.2■□□□□ 0.18
SIRPA-201ENST00000356025 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
SIRPA-201ENST00000356025 KNSTRNQ9Y448 316 aa16.2■□□□□ 0.18
SIRPA-201ENST00000356025 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
SIRPA-201ENST00000356025 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
SIRPA-201ENST00000356025 AFAP1Q8N556 730 aa16.19■□□□□ 0.18
SIRPA-201ENST00000356025 GRIN2AQ12879 1464 aa16.18■□□□□ 0.18
SIRPA-201ENST00000356025 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
SIRPA-201ENST00000356025 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
SIRPA-201ENST00000356025 NCOA1Q15788 1441 aa16.17■□□□□ 0.18
SIRPA-201ENST00000356025 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
SIRPA-201ENST00000356025 KIF3BO15066 747 aa16.16■□□□□ 0.18
SIRPA-201ENST00000356025 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
SIRPA-201ENST00000356025 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
SIRPA-201ENST00000356025 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
SIRPA-201ENST00000356025 TMF1P82094 1093 aa16.16■□□□□ 0.18
SIRPA-201ENST00000356025 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
SIRPA-201ENST00000356025 EXOC6Q8TAG9 804 aa16.16■□□□□ 0.18
SIRPA-201ENST00000356025 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
SIRPA-201ENST00000356025 KIAA1107Q9UPP5 1409 aa16.15■□□□□ 0.18
SIRPA-201ENST00000356025 GGT6Q6P531 493 aa16.15■□□□□ 0.18
SIRPA-201ENST00000356025 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.18
SIRPA-201ENST00000356025 C9orf84Q5VXU9 1444 aa16.14■□□□□ 0.18
SIRPA-201ENST00000356025 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
SIRPA-201ENST00000356025 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
SIRPA-201ENST00000356025 RPRD2Q5VT52 1461 aaKnown RBP16.12■□□□□ 0.17
SIRPA-201ENST00000356025 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
SIRPA-201ENST00000356025 KTN1Q86UP2 1357 aaKnown RBP16.12■□□□□ 0.17
SIRPA-201ENST00000356025 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
SIRPA-201ENST00000356025 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
SIRPA-201ENST00000356025 NPM1P06748 294 aaKnown RBP eCLIP16.11■□□□□ 0.17
SIRPA-201ENST00000356025 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
SIRPA-201ENST00000356025 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
SIRPA-201ENST00000356025 GPATCH8Q9UKJ3 1502 aaKnown RBP16.11■□□□□ 0.17
SIRPA-201ENST00000356025 DEKP35659 375 aaKnown RBP16.11■□□□□ 0.17
SIRPA-201ENST00000356025 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
SIRPA-201ENST00000356025 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
SIRPA-201ENST00000356025 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
SIRPA-201ENST00000356025 NLRP13Q86W25 1043 aa16.09■□□□□ 0.17
SIRPA-201ENST00000356025 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
SIRPA-201ENST00000356025 WDR62O43379 1518 aa16.09■□□□□ 0.17
SIRPA-201ENST00000356025 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
SIRPA-201ENST00000356025 RALBP1Q15311 655 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms