RNA–Protein interactions for RNA: ENST00000343788.10

SUGT1-202, Transcript of SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUGT1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGT1-202ENST00000343788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.58■□□□□ 0.73
SUGT1-202ENST00000343788 CFAP74Q9C0B2 1584 aa19.57■□□□□ 0.72
SUGT1-202ENST00000343788 STRCQ7RTU9 1775 aa19.57■□□□□ 0.72
SUGT1-202ENST00000343788 PREX1Q8TCU6 1659 aa19.57■□□□□ 0.72
SUGT1-202ENST00000343788 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
SUGT1-202ENST00000343788 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
SUGT1-202ENST00000343788 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
SUGT1-202ENST00000343788 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
SUGT1-202ENST00000343788 ATP10AO60312 1499 aa19.5■□□□□ 0.71
SUGT1-202ENST00000343788 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
SUGT1-202ENST00000343788 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
SUGT1-202ENST00000343788 UHRF1BP1Q6BDS2 1440 aa19.47■□□□□ 0.71
SUGT1-202ENST00000343788 PTPRTO14522 1441 aa19.46■□□□□ 0.71
SUGT1-202ENST00000343788 PLCH2O75038 1416 aa19.45■□□□□ 0.7
SUGT1-202ENST00000343788 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
SUGT1-202ENST00000343788 LTBP4Q8N2S1 1624 aa19.44■□□□□ 0.7
SUGT1-202ENST00000343788 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
SUGT1-202ENST00000343788 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
SUGT1-202ENST00000343788 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
SUGT1-202ENST00000343788 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
SUGT1-202ENST00000343788 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
SUGT1-202ENST00000343788 C3P01024 1663 aa19.33■□□□□ 0.69
SUGT1-202ENST00000343788 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.68
SUGT1-202ENST00000343788 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
SUGT1-202ENST00000343788 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
SUGT1-202ENST00000343788 KDM5CP41229 1560 aa19.31■□□□□ 0.68
SUGT1-202ENST00000343788 DIP2CQ9Y2E4 1556 aa19.31■□□□□ 0.68
SUGT1-202ENST00000343788 MYO5CQ9NQX4 1742 aa19.3■□□□□ 0.68
SUGT1-202ENST00000343788 MYT1LQ9UL68 1186 aa19.29■□□□□ 0.68
SUGT1-202ENST00000343788 REREQ9P2R6 1566 aa19.27■□□□□ 0.68
SUGT1-202ENST00000343788 UBAP1LF5GYI3 381 aa19.27■□□□□ 0.68
SUGT1-202ENST00000343788 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
SUGT1-202ENST00000343788 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
SUGT1-202ENST00000343788 KIF14Q15058 1648 aa19.25■□□□□ 0.67
SUGT1-202ENST00000343788 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
SUGT1-202ENST00000343788 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
SUGT1-202ENST00000343788 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
SUGT1-202ENST00000343788 CAMSAP1Q5T5Y3 1602 aa19.23■□□□□ 0.67
SUGT1-202ENST00000343788 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
SUGT1-202ENST00000343788 AGLP35573 1532 aa19.23■□□□□ 0.67
SUGT1-202ENST00000343788 NCKAP5LQ9HCH0 1330 aa19.23■□□□□ 0.67
SUGT1-202ENST00000343788 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
SUGT1-202ENST00000343788 CNTLNQ9NXG0 1405 aa19.18■□□□□ 0.66
SUGT1-202ENST00000343788 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
SUGT1-202ENST00000343788 NPATQ14207 1427 aa19.17■□□□□ 0.66
SUGT1-202ENST00000343788 EEA1Q15075 1411 aa19.15■□□□□ 0.66
SUGT1-202ENST00000343788 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
SUGT1-202ENST00000343788 ZMYM3Q14202 1370 aa19.14■□□□□ 0.65
SUGT1-202ENST00000343788 HSPA1LP34931 641 aa19.13■□□□□ 0.65
SUGT1-202ENST00000343788 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
SUGT1-202ENST00000343788 KIDINS220Q9ULH0 1771 aa19.12■□□□□ 0.65
SUGT1-202ENST00000343788 PKD2Q13563 968 aa19.12■□□□□ 0.65
SUGT1-202ENST00000343788 MED1Q15648 1581 aaPredicted RBP19.11■□□□□ 0.65
SUGT1-202ENST00000343788 ABCC1P33527 1531 aa19.11■□□□□ 0.65
SUGT1-202ENST00000343788 CLIP1P30622 1438 aa19.1■□□□□ 0.65
SUGT1-202ENST00000343788 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
SUGT1-202ENST00000343788 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
SUGT1-202ENST00000343788 TCOF1Q13428 1488 aaKnown RBP19.09■□□□□ 0.65
SUGT1-202ENST00000343788 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.65
SUGT1-202ENST00000343788 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
SUGT1-202ENST00000343788 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
SUGT1-202ENST00000343788 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
SUGT1-202ENST00000343788 PPP6R1Q9UPN7 881 aa19.06■□□□□ 0.64
SUGT1-202ENST00000343788 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
SUGT1-202ENST00000343788 LRRIQ1Q96JM4 1722 aa19.05■□□□□ 0.64
SUGT1-202ENST00000343788 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
SUGT1-202ENST00000343788 MYO3AQ8NEV4 1616 aa19.05■□□□□ 0.64
SUGT1-202ENST00000343788 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
SUGT1-202ENST00000343788 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
SUGT1-202ENST00000343788 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
SUGT1-202ENST00000343788 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.64
SUGT1-202ENST00000343788 CLTCQ00610 1675 aaKnown RBP19.02■□□□□ 0.64
SUGT1-202ENST00000343788 SUPT6HQ7KZ85 1726 aaKnown RBP19.02■□□□□ 0.63
SUGT1-202ENST00000343788 TOM1O60784 492 aa19.01■□□□□ 0.63
SUGT1-202ENST00000343788 UBTFP17480 764 aaKnown RBP19■□□□□ 0.63
SUGT1-202ENST00000343788 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
SUGT1-202ENST00000343788 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
SUGT1-202ENST00000343788 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
SUGT1-202ENST00000343788 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
SUGT1-202ENST00000343788 CDC42BPAQ5VT25 1732 aa18.97■□□□□ 0.63
SUGT1-202ENST00000343788 HNRNPMP52272 730 aaKnown RBP eCLIP18.96■□□□□ 0.63
SUGT1-202ENST00000343788 GGT6Q6P531 493 aa18.96■□□□□ 0.63
SUGT1-202ENST00000343788 CPS1P31327 1500 aa18.95■□□□□ 0.62
SUGT1-202ENST00000343788 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
SUGT1-202ENST00000343788 DNMT1P26358 1616 aaKnown RBP18.94■□□□□ 0.62
SUGT1-202ENST00000343788 A2ML1A8K2U0 1454 aa18.94■□□□□ 0.62
SUGT1-202ENST00000343788 SHANK2Q9UPX8 1470 aa18.94■□□□□ 0.62
SUGT1-202ENST00000343788 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
SUGT1-202ENST00000343788 A2MP01023 1474 aa18.93■□□□□ 0.62
SUGT1-202ENST00000343788 ATP7AQ04656 1500 aa18.92■□□□□ 0.62
SUGT1-202ENST00000343788 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
SUGT1-202ENST00000343788 NEURL4Q96JN8 1562 aa18.91■□□□□ 0.62
SUGT1-202ENST00000343788 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
SUGT1-202ENST00000343788 INO80Q9ULG1 1556 aaPredicted RBP18.89■□□□□ 0.61
SUGT1-202ENST00000343788 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
SUGT1-202ENST00000343788 POLR1AO95602 1720 aaPredicted RBP18.87■□□□□ 0.61
SUGT1-202ENST00000343788 CASKIN1Q8WXD9 1431 aa18.87■□□□□ 0.61
SUGT1-202ENST00000343788 VWDEQ8N2E2 1590 aa18.86■□□□□ 0.61
SUGT1-202ENST00000343788 FBXO31Q5XUX0 539 aaPredicted RBP18.86■□□□□ 0.61
SUGT1-202ENST00000343788 KIAA1107Q9UPP5 1409 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms