RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
CARMIL3-201ENST00000342740 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
CARMIL3-201ENST00000342740 STK26Q9P289 416 aa20.42■□□□□ 0.86
CARMIL3-201ENST00000342740 KIF21BO75037 1637 aa20.41■□□□□ 0.86
CARMIL3-201ENST00000342740 SYNJ1O43426 1573 aa20.39■□□□□ 0.86
CARMIL3-201ENST00000342740 MORC1Q86VD1 984 aa20.39■□□□□ 0.86
CARMIL3-201ENST00000342740 LAS1LQ9Y4W2 734 aaKnown RBP20.39■□□□□ 0.86
CARMIL3-201ENST00000342740 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
CARMIL3-201ENST00000342740 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
CARMIL3-201ENST00000342740 KTN1Q86UP2 1357 aaKnown RBP20.37■□□□□ 0.85
CARMIL3-201ENST00000342740 FRAT1Q92837 279 aaPredicted RBP20.36■□□□□ 0.85
CARMIL3-201ENST00000342740 NBR1Q14596 966 aa20.36■□□□□ 0.85
CARMIL3-201ENST00000342740 A0A0G2JS52 829 aa20.36■□□□□ 0.85
CARMIL3-201ENST00000342740 NESP48681 1621 aa20.34■□□□□ 0.85
CARMIL3-201ENST00000342740 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
CARMIL3-201ENST00000342740 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
CARMIL3-201ENST00000342740 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
CARMIL3-201ENST00000342740 HAP1P54257 671 aaPredicted RBP20.32■□□□□ 0.84
CARMIL3-201ENST00000342740 RALBP1Q15311 655 aa20.32■□□□□ 0.84
CARMIL3-201ENST00000342740 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
CARMIL3-201ENST00000342740 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
CARMIL3-201ENST00000342740 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
CARMIL3-201ENST00000342740 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
CARMIL3-201ENST00000342740 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
CARMIL3-201ENST00000342740 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
CARMIL3-201ENST00000342740 ERICH3Q5RHP9 1530 aa20.28■□□□□ 0.84
CARMIL3-201ENST00000342740 SOX12O15370 315 aa20.28■□□□□ 0.84
CARMIL3-201ENST00000342740 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
CARMIL3-201ENST00000342740 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
CARMIL3-201ENST00000342740 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.83
CARMIL3-201ENST00000342740 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
CARMIL3-201ENST00000342740 CCDC144AA2RUR9 1427 aa20.26■□□□□ 0.83
CARMIL3-201ENST00000342740 HDGFL2Q7Z4V5 671 aaPredicted RBP20.26■□□□□ 0.83
CARMIL3-201ENST00000342740 GRIN2BQ13224 1484 aa20.25■□□□□ 0.83
CARMIL3-201ENST00000342740 CASKIN1Q8WXD9 1431 aa20.25■□□□□ 0.83
CARMIL3-201ENST00000342740 RGS3P49796 1198 aa20.25■□□□□ 0.83
CARMIL3-201ENST00000342740 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
CARMIL3-201ENST00000342740 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
CARMIL3-201ENST00000342740 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
CARMIL3-201ENST00000342740 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
CARMIL3-201ENST00000342740 CUX1P39880 1505 aa20.23■□□□□ 0.83
CARMIL3-201ENST00000342740 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
CARMIL3-201ENST00000342740 DDRGK1Q96HY6 314 aa20.22■□□□□ 0.83
CARMIL3-201ENST00000342740 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
CARMIL3-201ENST00000342740 MS4A1P11836 297 aa20.21■□□□□ 0.83
CARMIL3-201ENST00000342740 BECN1Q14457 450 aa20.21■□□□□ 0.83
CARMIL3-201ENST00000342740 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
CARMIL3-201ENST00000342740 NLRP13Q86W25 1043 aa20.19■□□□□ 0.82
CARMIL3-201ENST00000342740 U2AF1L5P0DN76 240 aaPredicted RBP20.19■□□□□ 0.82
CARMIL3-201ENST00000342740 U2AF1Q01081 240 aaKnown RBP eCLIP20.19■□□□□ 0.82
CARMIL3-201ENST00000342740 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
CARMIL3-201ENST00000342740 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
CARMIL3-201ENST00000342740 TRAK1Q9UPV9 953 aa20.17■□□□□ 0.82
CARMIL3-201ENST00000342740 NCOA2Q15596 1464 aa20.17■□□□□ 0.82
CARMIL3-201ENST00000342740 CHMP4BQ9H444 224 aaKnown RBP20.15■□□□□ 0.82
CARMIL3-201ENST00000342740 RCAN3Q9UKA8 241 aa20.14■□□□□ 0.82
CARMIL3-201ENST00000342740 ARXQ96QS3 562 aa20.14■□□□□ 0.81
CARMIL3-201ENST00000342740 UACAQ9BZF9 1416 aa20.14■□□□□ 0.81
CARMIL3-201ENST00000342740 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
CARMIL3-201ENST00000342740 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
CARMIL3-201ENST00000342740 TERF2IPQ9NYB0 399 aa20.12■□□□□ 0.81
CARMIL3-201ENST00000342740 FYCO1Q9BQS8 1478 aa20.12■□□□□ 0.81
CARMIL3-201ENST00000342740 USP47Q96K76 1375 aa20.12■□□□□ 0.81
CARMIL3-201ENST00000342740 PRKRIP1Q9H875 184 aaPredicted RBP20.11■□□□□ 0.81
CARMIL3-201ENST00000342740 PANK3Q9H999 370 aa20.11■□□□□ 0.81
CARMIL3-201ENST00000342740 RRBP1Q9P2E9 1410 aaKnown RBP20.09■□□□□ 0.81
CARMIL3-201ENST00000342740 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
CARMIL3-201ENST00000342740 ANKRD50Q9ULJ7 1429 aa20.07■□□□□ 0.8
CARMIL3-201ENST00000342740 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
CARMIL3-201ENST00000342740 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
CARMIL3-201ENST00000342740 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
CARMIL3-201ENST00000342740 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
CARMIL3-201ENST00000342740 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
CARMIL3-201ENST00000342740 RTF1Q92541 710 aaKnown RBP20.05■□□□□ 0.8
CARMIL3-201ENST00000342740 CASC1Q6TDU7 716 aa20.05■□□□□ 0.8
CARMIL3-201ENST00000342740 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
CARMIL3-201ENST00000342740 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
CARMIL3-201ENST00000342740 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
CARMIL3-201ENST00000342740 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
CARMIL3-201ENST00000342740 EFCAB5A4FU69 1503 aa20.03■□□□□ 0.8
CARMIL3-201ENST00000342740 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
CARMIL3-201ENST00000342740 DNMBPQ6XZF7 1577 aa20.02■□□□□ 0.79
CARMIL3-201ENST00000342740 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
CARMIL3-201ENST00000342740 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
CARMIL3-201ENST00000342740 IPO8O15397 1037 aaKnown RBP20■□□□□ 0.79
CARMIL3-201ENST00000342740 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
CARMIL3-201ENST00000342740 CALD1Q05682 793 aaKnown RBP19.99■□□□□ 0.79
CARMIL3-201ENST00000342740 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
CARMIL3-201ENST00000342740 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
CARMIL3-201ENST00000342740 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.97■□□□□ 0.79
CARMIL3-201ENST00000342740 FAM69CQ0P6D2 419 aa19.97■□□□□ 0.79
CARMIL3-201ENST00000342740 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
CARMIL3-201ENST00000342740 NGDNQ8NEJ9 315 aaKnown RBP19.96■□□□□ 0.79
CARMIL3-201ENST00000342740 GOLGA6L22H0YM25 854 aa19.95■□□□□ 0.78
CARMIL3-201ENST00000342740 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
CARMIL3-201ENST00000342740 RBM19Q9Y4C8 960 aaKnown RBP19.95■□□□□ 0.78
CARMIL3-201ENST00000342740 ABCA10Q8WWZ4 1543 aa19.94■□□□□ 0.78
CARMIL3-201ENST00000342740 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
CARMIL3-201ENST00000342740 NOP58Q9Y2X3 529 aaKnown RBP19.94■□□□□ 0.78
CARMIL3-201ENST00000342740 EVC2Q86UK5 1308 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms