RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
TRERF1-201ENST00000340840 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
TRERF1-201ENST00000340840 CFDP1Q9UEE9 299 aaPredicted RBP12.65□□□□□ -0.38
TRERF1-201ENST00000340840 SUPT6HQ7KZ85 1726 aaKnown RBP12.64□□□□□ -0.39
TRERF1-201ENST00000340840 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
TRERF1-201ENST00000340840 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
TRERF1-201ENST00000340840 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
TRERF1-201ENST00000340840 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
TRERF1-201ENST00000340840 MSH5O43196 834 aa12.61□□□□□ -0.39
TRERF1-201ENST00000340840 KIF7Q2M1P5 1343 aa12.61□□□□□ -0.39
TRERF1-201ENST00000340840 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
TRERF1-201ENST00000340840 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
TRERF1-201ENST00000340840 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
TRERF1-201ENST00000340840 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
TRERF1-201ENST00000340840 DEKP35659 375 aaKnown RBP12.6□□□□□ -0.39
TRERF1-201ENST00000340840 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
TRERF1-201ENST00000340840 TSPY4P0CV99 314 aa12.59□□□□□ -0.39
TRERF1-201ENST00000340840 TSPY10P0CW01 314 aa12.59□□□□□ -0.39
TRERF1-201ENST00000340840 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
TRERF1-201ENST00000340840 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
TRERF1-201ENST00000340840 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
TRERF1-201ENST00000340840 SENP3-EIF4A1A0A087X0R7 540 aa12.57□□□□□ -0.4
TRERF1-201ENST00000340840 PKD2Q13563 968 aa12.57□□□□□ -0.4
TRERF1-201ENST00000340840 AEBP2Q6ZN18 517 aaPredicted RBP12.57□□□□□ -0.4
TRERF1-201ENST00000340840 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
TRERF1-201ENST00000340840 AKNAQ7Z591 1439 aa12.56□□□□□ -0.4
TRERF1-201ENST00000340840 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
TRERF1-201ENST00000340840 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
TRERF1-201ENST00000340840 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
TRERF1-201ENST00000340840 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
TRERF1-201ENST00000340840 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
TRERF1-201ENST00000340840 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
TRERF1-201ENST00000340840 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
TRERF1-201ENST00000340840 USP47Q96K76 1375 aa12.54□□□□□ -0.4
TRERF1-201ENST00000340840 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
TRERF1-201ENST00000340840 HECW1Q76N89 1606 aa12.54□□□□□ -0.4
TRERF1-201ENST00000340840 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
TRERF1-201ENST00000340840 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
TRERF1-201ENST00000340840 ANKRD30AQ9BXX3 1397 aa12.53□□□□□ -0.4
TRERF1-201ENST00000340840 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.4
TRERF1-201ENST00000340840 RALBP1Q15311 655 aa12.52□□□□□ -0.41
TRERF1-201ENST00000340840 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
TRERF1-201ENST00000340840 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
TRERF1-201ENST00000340840 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
TRERF1-201ENST00000340840 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
TRERF1-201ENST00000340840 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
TRERF1-201ENST00000340840 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
TRERF1-201ENST00000340840 RPRD2Q5VT52 1461 aaKnown RBP12.49□□□□□ -0.41
TRERF1-201ENST00000340840 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
TRERF1-201ENST00000340840 DAPK1P53355 1430 aa12.49□□□□□ -0.41
TRERF1-201ENST00000340840 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
TRERF1-201ENST00000340840 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
TRERF1-201ENST00000340840 RCAN3Q9UKA8 241 aa12.48□□□□□ -0.41
TRERF1-201ENST00000340840 NUP155O75694 1391 aa12.48□□□□□ -0.41
TRERF1-201ENST00000340840 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
TRERF1-201ENST00000340840 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
TRERF1-201ENST00000340840 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
TRERF1-201ENST00000340840 DDRGK1Q96HY6 314 aa12.46□□□□□ -0.41
TRERF1-201ENST00000340840 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
TRERF1-201ENST00000340840 PDE3BQ13370 1112 aa12.46□□□□□ -0.41
TRERF1-201ENST00000340840 KTN1Q86UP2 1357 aaKnown RBP12.46□□□□□ -0.42
TRERF1-201ENST00000340840 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
TRERF1-201ENST00000340840 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
TRERF1-201ENST00000340840 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
TRERF1-201ENST00000340840 SAMD9Q5K651 1589 aa12.45□□□□□ -0.42
TRERF1-201ENST00000340840 ST20-MTHFSA0A0A6YYL1 179 aa12.44□□□□□ -0.42
TRERF1-201ENST00000340840 FAM69CQ0P6D2 419 aa12.44□□□□□ -0.42
TRERF1-201ENST00000340840 RGL3Q3MIN7 710 aa12.44□□□□□ -0.42
TRERF1-201ENST00000340840 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.44□□□□□ -0.42
TRERF1-201ENST00000340840 KIAA1107Q9UPP5 1409 aa12.44□□□□□ -0.42
TRERF1-201ENST00000340840 IQGAP2Q13576 1575 aa12.44□□□□□ -0.42
TRERF1-201ENST00000340840 RRP1P56182 461 aaKnown RBP12.44□□□□□ -0.42
TRERF1-201ENST00000340840 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
TRERF1-201ENST00000340840 ABCC5O15440 1437 aa12.43□□□□□ -0.42
TRERF1-201ENST00000340840 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
TRERF1-201ENST00000340840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRERF1-201ENST00000340840 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRERF1-201ENST00000340840 KIF21AQ7Z4S6 1674 aa12.43□□□□□ -0.42
TRERF1-201ENST00000340840 NEFMP07197 916 aa12.42□□□□□ -0.42
TRERF1-201ENST00000340840 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
TRERF1-201ENST00000340840 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
TRERF1-201ENST00000340840 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
TRERF1-201ENST00000340840 MLECQ14165 292 aa12.4□□□□□ -0.42
TRERF1-201ENST00000340840 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
TRERF1-201ENST00000340840 EXOC6Q8TAG9 804 aa12.4□□□□□ -0.42
TRERF1-201ENST00000340840 GCC2Q8IWJ2 1684 aa12.4□□□□□ -0.42
TRERF1-201ENST00000340840 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.43
TRERF1-201ENST00000340840 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
TRERF1-201ENST00000340840 PDE4AP27815 886 aa12.38□□□□□ -0.43
TRERF1-201ENST00000340840 MS4A1P11836 297 aa12.38□□□□□ -0.43
TRERF1-201ENST00000340840 TMF1P82094 1093 aa12.37□□□□□ -0.43
TRERF1-201ENST00000340840 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
TRERF1-201ENST00000340840 ARHGEF11O15085 1522 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 PTPRGP23470 1445 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 TEX14Q8IWB6 1497 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
TRERF1-201ENST00000340840 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms