RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
RPGR-202ENST00000339363 CASKIN1Q8WXD9 1431 aa12.47□□□□□ -0.41
RPGR-202ENST00000339363 UACAQ9BZF9 1416 aa12.47□□□□□ -0.41
RPGR-202ENST00000339363 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
RPGR-202ENST00000339363 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
RPGR-202ENST00000339363 NAP1L5Q96NT1 182 aaPredicted RBP12.47□□□□□ -0.41
RPGR-202ENST00000339363 ARXQ96QS3 562 aa12.46□□□□□ -0.41
RPGR-202ENST00000339363 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
RPGR-202ENST00000339363 WDR62O43379 1518 aa12.45□□□□□ -0.42
RPGR-202ENST00000339363 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
RPGR-202ENST00000339363 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
RPGR-202ENST00000339363 NCOA2Q15596 1464 aa12.44□□□□□ -0.42
RPGR-202ENST00000339363 GSE1Q14687 1217 aa12.44□□□□□ -0.42
RPGR-202ENST00000339363 POLA1P09884 1462 aaPredicted RBP12.44□□□□□ -0.42
RPGR-202ENST00000339363 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
RPGR-202ENST00000339363 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
RPGR-202ENST00000339363 KIF21AQ7Z4S6 1674 aa12.43□□□□□ -0.42
RPGR-202ENST00000339363 PDS5BQ9NTI5 1447 aa12.43□□□□□ -0.42
RPGR-202ENST00000339363 PRKRIP1Q9H875 184 aaPredicted RBP12.43□□□□□ -0.42
RPGR-202ENST00000339363 FANCD2Q9BXW9 1451 aa12.42□□□□□ -0.42
RPGR-202ENST00000339363 ZNF644Q9H582 1327 aaPredicted RBP12.41□□□□□ -0.42
RPGR-202ENST00000339363 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
RPGR-202ENST00000339363 MRS2Q9HD23 443 aa12.4□□□□□ -0.42
RPGR-202ENST00000339363 ARID4BQ4LE39 1312 aaPredicted RBP12.39□□□□□ -0.43
RPGR-202ENST00000339363 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
RPGR-202ENST00000339363 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
RPGR-202ENST00000339363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPGR-202ENST00000339363 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
RPGR-202ENST00000339363 MRC2Q9UBG0 1479 aa12.37□□□□□ -0.43
RPGR-202ENST00000339363 SKAP1Q86WV1 359 aa12.37□□□□□ -0.43
RPGR-202ENST00000339363 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
RPGR-202ENST00000339363 CCDC7Q96M83 1385 aa12.36□□□□□ -0.43
RPGR-202ENST00000339363 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
RPGR-202ENST00000339363 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
RPGR-202ENST00000339363 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
RPGR-202ENST00000339363 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
RPGR-202ENST00000339363 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
RPGR-202ENST00000339363 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
RPGR-202ENST00000339363 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
RPGR-202ENST00000339363 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
RPGR-202ENST00000339363 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
RPGR-202ENST00000339363 CDK13Q14004 1512 aaKnown RBP12.34□□□□□ -0.43
RPGR-202ENST00000339363 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
RPGR-202ENST00000339363 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
RPGR-202ENST00000339363 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
RPGR-202ENST00000339363 UGGT2Q9NYU1 1516 aa12.31□□□□□ -0.44
RPGR-202ENST00000339363 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
RPGR-202ENST00000339363 URB2Q14146 1524 aaKnown RBP12.3□□□□□ -0.44
RPGR-202ENST00000339363 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
RPGR-202ENST00000339363 SPATA31E1Q6ZUB1 1445 aa12.3□□□□□ -0.44
RPGR-202ENST00000339363 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
RPGR-202ENST00000339363 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
RPGR-202ENST00000339363 FAM43AQ8N2R8 423 aa12.29□□□□□ -0.44
RPGR-202ENST00000339363 SAMD9Q5K651 1589 aa12.29□□□□□ -0.44
RPGR-202ENST00000339363 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
RPGR-202ENST00000339363 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
RPGR-202ENST00000339363 DHX29Q7Z478 1369 aaKnown RBP12.28□□□□□ -0.44
RPGR-202ENST00000339363 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
RPGR-202ENST00000339363 DNMBPQ6XZF7 1577 aa12.28□□□□□ -0.44
RPGR-202ENST00000339363 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
RPGR-202ENST00000339363 BCORL1Q5H9F3 1711 aa12.27□□□□□ -0.44
RPGR-202ENST00000339363 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.45
RPGR-202ENST00000339363 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
RPGR-202ENST00000339363 PDE4AP27815 886 aa12.25□□□□□ -0.45
RPGR-202ENST00000339363 HECW1Q76N89 1606 aa12.24□□□□□ -0.45
RPGR-202ENST00000339363 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
RPGR-202ENST00000339363 GCC2Q8IWJ2 1684 aa12.22□□□□□ -0.45
RPGR-202ENST00000339363 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.45
RPGR-202ENST00000339363 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.45
RPGR-202ENST00000339363 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
RPGR-202ENST00000339363 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.45
RPGR-202ENST00000339363 CUL7Q14999 1698 aa12.21□□□□□ -0.45
RPGR-202ENST00000339363 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.46
RPGR-202ENST00000339363 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
RPGR-202ENST00000339363 ABCC5O15440 1437 aa12.2□□□□□ -0.46
RPGR-202ENST00000339363 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
RPGR-202ENST00000339363 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
RPGR-202ENST00000339363 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
RPGR-202ENST00000339363 RRP9O43818 475 aaKnown RBP12.18□□□□□ -0.46
RPGR-202ENST00000339363 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
RPGR-202ENST00000339363 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
RPGR-202ENST00000339363 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
RPGR-202ENST00000339363 PLIN1O60240 522 aa12.17□□□□□ -0.46
RPGR-202ENST00000339363 DAPK1P53355 1430 aa12.17□□□□□ -0.46
RPGR-202ENST00000339363 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
RPGR-202ENST00000339363 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
RPGR-202ENST00000339363 PZPP20742 1482 aa12.17□□□□□ -0.46
RPGR-202ENST00000339363 RBM10P98175 930 aaKnown RBP12.16□□□□□ -0.46
RPGR-202ENST00000339363 USP47Q96K76 1375 aa12.16□□□□□ -0.46
RPGR-202ENST00000339363 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
RPGR-202ENST00000339363 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
RPGR-202ENST00000339363 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
RPGR-202ENST00000339363 ARID3AQ99856 593 aa12.14□□□□□ -0.47
RPGR-202ENST00000339363 PDE4CQ08493 712 aa12.13□□□□□ -0.47
RPGR-202ENST00000339363 PKD2Q13563 968 aa12.13□□□□□ -0.47
RPGR-202ENST00000339363 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
RPGR-202ENST00000339363 PRG4Q92954 1404 aaPredicted RBP12.12□□□□□ -0.47
RPGR-202ENST00000339363 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
RPGR-202ENST00000339363 MBD5Q9P267 1494 aa12.11□□□□□ -0.47
RPGR-202ENST00000339363 RRAGDQ9NQL2 400 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms