RNA–Protein interactions for RNA: ENST00000335295.4

HBB-201, Transcript of hemoglobin subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HBB, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-201ENST00000335295 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
HBB-201ENST00000335295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.17
HBB-201ENST00000335295 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
HBB-201ENST00000335295 ARHGEF12Q9NZN5 1544 aa22.35■■□□□ 1.17
HBB-201ENST00000335295 PREX1Q8TCU6 1659 aa22.33■■□□□ 1.17
HBB-201ENST00000335295 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
HBB-201ENST00000335295 DMRT2Q9Y5R5 561 aa22.32■■□□□ 1.16
HBB-201ENST00000335295 MAGI2Q86UL8 1455 aa22.31■■□□□ 1.16
HBB-201ENST00000335295 RANGAP1P46060 587 aaPredicted RBP22.3■■□□□ 1.16
HBB-201ENST00000335295 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
HBB-201ENST00000335295 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
HBB-201ENST00000335295 CFAP74Q9C0B2 1584 aa22.27■■□□□ 1.16
HBB-201ENST00000335295 ATP10AO60312 1499 aa22.27■■□□□ 1.16
HBB-201ENST00000335295 UHRF1BP1Q6BDS2 1440 aa22.26■■□□□ 1.15
HBB-201ENST00000335295 PTPRTO14522 1441 aa22.25■■□□□ 1.15
HBB-201ENST00000335295 C9orf84Q5VXU9 1444 aa22.24■■□□□ 1.15
HBB-201ENST00000335295 PLCH2O75038 1416 aa22.19■■□□□ 1.14
HBB-201ENST00000335295 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
HBB-201ENST00000335295 AFAP1Q8N556 730 aa22.14■■□□□ 1.13
HBB-201ENST00000335295 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
HBB-201ENST00000335295 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
HBB-201ENST00000335295 NCOA1Q15788 1441 aa22.11■■□□□ 1.13
HBB-201ENST00000335295 C3P01024 1663 aa22.09■■□□□ 1.13
HBB-201ENST00000335295 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.13
HBB-201ENST00000335295 ZNF335Q9H4Z2 1342 aaPredicted RBP22.08■■□□□ 1.13
HBB-201ENST00000335295 UBAP1LF5GYI3 381 aa22.08■■□□□ 1.13
HBB-201ENST00000335295 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.13
HBB-201ENST00000335295 TRAPPC8Q9Y2L5 1435 aa22.06■■□□□ 1.12
HBB-201ENST00000335295 DIP2CQ9Y2E4 1556 aa22.05■■□□□ 1.12
HBB-201ENST00000335295 NCKAP5LQ9HCH0 1330 aa22.05■■□□□ 1.12
HBB-201ENST00000335295 MYT1LQ9UL68 1186 aa22.04■■□□□ 1.12
HBB-201ENST00000335295 KDM5CP41229 1560 aa22.03■■□□□ 1.12
HBB-201ENST00000335295 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
HBB-201ENST00000335295 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
HBB-201ENST00000335295 ABCA6Q8N139 1617 aa21.99■■□□□ 1.11
HBB-201ENST00000335295 KIF14Q15058 1648 aa21.98■■□□□ 1.11
HBB-201ENST00000335295 REREQ9P2R6 1566 aa21.97■■□□□ 1.11
HBB-201ENST00000335295 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
HBB-201ENST00000335295 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
HBB-201ENST00000335295 HSPA1LP34931 641 aa21.95■■□□□ 1.1
HBB-201ENST00000335295 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
HBB-201ENST00000335295 ARHGAP5Q13017 1502 aa21.94■■□□□ 1.1
HBB-201ENST00000335295 AGLP35573 1532 aa21.93■■□□□ 1.1
HBB-201ENST00000335295 MED1Q15648 1581 aaPredicted RBP21.93■■□□□ 1.1
HBB-201ENST00000335295 MLH3Q9UHC1 1453 aa21.92■■□□□ 1.1
HBB-201ENST00000335295 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
HBB-201ENST00000335295 PIP4K2BP78356 416 aa21.87■■□□□ 1.09
HBB-201ENST00000335295 CNTLNQ9NXG0 1405 aa21.87■■□□□ 1.09
HBB-201ENST00000335295 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
HBB-201ENST00000335295 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
HBB-201ENST00000335295 NPATQ14207 1427 aa21.85■■□□□ 1.09
HBB-201ENST00000335295 TCOF1Q13428 1488 aaKnown RBP21.83■■□□□ 1.08
HBB-201ENST00000335295 PKD2Q13563 968 aa21.82■■□□□ 1.08
HBB-201ENST00000335295 KIDINS220Q9ULH0 1771 aa21.82■■□□□ 1.08
HBB-201ENST00000335295 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
HBB-201ENST00000335295 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
HBB-201ENST00000335295 ABCC1P33527 1531 aa21.8■■□□□ 1.08
HBB-201ENST00000335295 PLA2R1Q13018 1463 aa21.79■■□□□ 1.08
HBB-201ENST00000335295 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
HBB-201ENST00000335295 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
HBB-201ENST00000335295 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.07
HBB-201ENST00000335295 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
HBB-201ENST00000335295 MROH2AA6NES4 1674 aa21.75■■□□□ 1.07
HBB-201ENST00000335295 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
HBB-201ENST00000335295 CEP170BQ9Y4F5 1589 aaPredicted RBP21.75■■□□□ 1.07
HBB-201ENST00000335295 FMN1Q68DA7 1419 aa21.74■■□□□ 1.07
HBB-201ENST00000335295 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
HBB-201ENST00000335295 CLIP1P30622 1438 aa21.73■■□□□ 1.07
HBB-201ENST00000335295 ZNF142P52746 1687 aaPredicted RBP21.73■■□□□ 1.07
HBB-201ENST00000335295 TOM1O60784 492 aa21.73■■□□□ 1.07
HBB-201ENST00000335295 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
HBB-201ENST00000335295 EEA1Q15075 1411 aa21.72■■□□□ 1.07
HBB-201ENST00000335295 PREX2Q70Z35 1606 aa21.71■■□□□ 1.07
HBB-201ENST00000335295 CLTCQ00610 1675 aaKnown RBP21.71■■□□□ 1.07
HBB-201ENST00000335295 SAMD9LQ8IVG5 1584 aa21.7■■□□□ 1.06
HBB-201ENST00000335295 ALKQ9UM73 1620 aa21.7■■□□□ 1.06
HBB-201ENST00000335295 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
HBB-201ENST00000335295 GGT6Q6P531 493 aa21.67■■□□□ 1.06
HBB-201ENST00000335295 ZNF777Q9ULD5 760 aaPredicted RBP21.67■■□□□ 1.06
HBB-201ENST00000335295 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.06
HBB-201ENST00000335295 SHANK2Q9UPX8 1470 aa21.65■■□□□ 1.06
HBB-201ENST00000335295 SPAG9O60271 1321 aaKnown RBP21.65■■□□□ 1.06
HBB-201ENST00000335295 RGS17Q9UGC6 210 aaPredicted RBP21.65■■□□□ 1.06
HBB-201ENST00000335295 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.05
HBB-201ENST00000335295 DNMT1P26358 1616 aaKnown RBP21.63■■□□□ 1.05
HBB-201ENST00000335295 CPS1P31327 1500 aa21.63■■□□□ 1.05
HBB-201ENST00000335295 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
HBB-201ENST00000335295 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
HBB-201ENST00000335295 SYCP2Q9BX26 1530 aa21.61■■□□□ 1.05
HBB-201ENST00000335295 PLXNC1O60486 1568 aa21.61■■□□□ 1.05
HBB-201ENST00000335295 A2MP01023 1474 aa21.6■■□□□ 1.05
HBB-201ENST00000335295 CDC42BPAQ5VT25 1732 aa21.6■■□□□ 1.05
HBB-201ENST00000335295 FBXO31Q5XUX0 539 aaPredicted RBP21.59■■□□□ 1.05
HBB-201ENST00000335295 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
HBB-201ENST00000335295 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
HBB-201ENST00000335295 GPATCH8Q9UKJ3 1502 aaKnown RBP21.54■■□□□ 1.04
HBB-201ENST00000335295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.04
HBB-201ENST00000335295 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
HBB-201ENST00000335295 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.03
HBB-201ENST00000335295 TNRQ92752 1358 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms