RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
SCN4B-201ENST00000324727 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
SCN4B-201ENST00000324727 IGF1RP08069 1367 aa15.25■□□□□ 0.03
SCN4B-201ENST00000324727 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
SCN4B-201ENST00000324727 NESP48681 1621 aa15.25■□□□□ 0.03
SCN4B-201ENST00000324727 PRKCSHP14314 528 aaPredicted RBP15.24■□□□□ 0.03
SCN4B-201ENST00000324727 U2SURPO15042 1029 aaKnown RBP15.24■□□□□ 0.03
SCN4B-201ENST00000324727 NUTM2FA1L443 756 aa15.23■□□□□ 0.03
SCN4B-201ENST00000324727 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
SCN4B-201ENST00000324727 HSPA5P11021 654 aaKnown RBP15.22■□□□□ 0.03
SCN4B-201ENST00000324727 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
SCN4B-201ENST00000324727 KANK1Q14678 1352 aa15.21■□□□□ 0.03
SCN4B-201ENST00000324727 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
SCN4B-201ENST00000324727 PTPRGP23470 1445 aa15.21■□□□□ 0.03
SCN4B-201ENST00000324727 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
SCN4B-201ENST00000324727 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
SCN4B-201ENST00000324727 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
SCN4B-201ENST00000324727 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
SCN4B-201ENST00000324727 BECN1Q14457 450 aa15.18■□□□□ 0.02
SCN4B-201ENST00000324727 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
SCN4B-201ENST00000324727 TMF1P82094 1093 aa15.16■□□□□ 0.02
SCN4B-201ENST00000324727 NCAPD3P42695 1498 aa15.16■□□□□ 0.02
SCN4B-201ENST00000324727 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
SCN4B-201ENST00000324727 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
SCN4B-201ENST00000324727 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
SCN4B-201ENST00000324727 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
SCN4B-201ENST00000324727 FAM69CQ0P6D2 419 aa15.1■□□□□ 0.01
SCN4B-201ENST00000324727 MAPK8IP3Q9UPT6 1336 aa15.1■□□□□ 0.01
SCN4B-201ENST00000324727 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
SCN4B-201ENST00000324727 MORC1Q86VD1 984 aa15.08■□□□□ 0
SCN4B-201ENST00000324727 NUDCQ9Y266 331 aa15.07■□□□□ 0
SCN4B-201ENST00000324727 HDGFP51858 240 aaKnown RBP15.07■□□□□ 0
SCN4B-201ENST00000324727 PNNQ9H307 717 aaKnown RBP15.05■□□□□ 0
SCN4B-201ENST00000324727 ANO8Q9HCE9 1232 aaPredicted RBP15.05■□□□□ 0
SCN4B-201ENST00000324727 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ -0
SCN4B-201ENST00000324727 AFAP1Q8N556 730 aa15.05■□□□□ -0
SCN4B-201ENST00000324727 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
SCN4B-201ENST00000324727 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
SCN4B-201ENST00000324727 CCDC18Q5T9S5 1454 aa15.03■□□□□ -0
SCN4B-201ENST00000324727 CCER2I3L3R5 266 aa15.03■□□□□ -0
SCN4B-201ENST00000324727 L1TD1Q5T7N2 865 aaKnown RBP15.03■□□□□ -0
SCN4B-201ENST00000324727 CDK11BP21127 795 aaKnown RBP15.02■□□□□ -0
SCN4B-201ENST00000324727 FANCIQ9NVI1 1328 aa15.01□□□□□ -0.01
SCN4B-201ENST00000324727 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
SCN4B-201ENST00000324727 MYH16Q9H6N6 1097 aa15.01□□□□□ -0.01
SCN4B-201ENST00000324727 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
SCN4B-201ENST00000324727 GOLGA6L22H0YM25 854 aa15□□□□□ -0.01
SCN4B-201ENST00000324727 DNTTIP2Q5QJE6 756 aaKnown RBP15□□□□□ -0.01
SCN4B-201ENST00000324727 FTSJ3Q8IY81 847 aaKnown RBP15□□□□□ -0.01
SCN4B-201ENST00000324727 RSPH4AQ5TD94 716 aa15□□□□□ -0.01
SCN4B-201ENST00000324727 RSPH6AQ9H0K4 717 aa15□□□□□ -0.01
SCN4B-201ENST00000324727 U2AF1L5P0DN76 240 aaPredicted RBP14.99□□□□□ -0.01
SCN4B-201ENST00000324727 RGS3P49796 1198 aa14.99□□□□□ -0.01
SCN4B-201ENST00000324727 U2AF1Q01081 240 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCN4B-201ENST00000324727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
SCN4B-201ENST00000324727 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
SCN4B-201ENST00000324727 HSP90AA2PQ14568 343 aaPredicted RBP14.96□□□□□ -0.01
SCN4B-201ENST00000324727 PTMAP06454 111 aaKnown RBP14.96□□□□□ -0.01
SCN4B-201ENST00000324727 LTV1Q96GA3 475 aaPredicted RBP14.96□□□□□ -0.01
SCN4B-201ENST00000324727 CFTRP13569 1480 aa14.96□□□□□ -0.02
SCN4B-201ENST00000324727 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.02
SCN4B-201ENST00000324727 NCLP19338 710 aaKnown RBP14.96□□□□□ -0.02
SCN4B-201ENST00000324727 HDGFL2Q7Z4V5 671 aaPredicted RBP14.95□□□□□ -0.02
SCN4B-201ENST00000324727 EID1Q9Y6B2 187 aa14.95□□□□□ -0.02
SCN4B-201ENST00000324727 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
SCN4B-201ENST00000324727 USP35Q9P2H5 1018 aa14.94□□□□□ -0.02
SCN4B-201ENST00000324727 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
SCN4B-201ENST00000324727 CSB-PGBD3P0DP91 1061 aa14.93□□□□□ -0.02
SCN4B-201ENST00000324727 ZNF330Q9Y3S2 320 aaPredicted RBP14.92□□□□□ -0.02
SCN4B-201ENST00000324727 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
SCN4B-201ENST00000324727 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
SCN4B-201ENST00000324727 NPHP1O15259 732 aa14.89□□□□□ -0.03
SCN4B-201ENST00000324727 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
SCN4B-201ENST00000324727 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
SCN4B-201ENST00000324727 TAOK2Q9UL54 1235 aa14.89□□□□□ -0.03
SCN4B-201ENST00000324727 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
SCN4B-201ENST00000324727 MSNP26038 577 aaKnown RBP14.88□□□□□ -0.03
SCN4B-201ENST00000324727 APBB1O00213 710 aa14.87□□□□□ -0.03
SCN4B-201ENST00000324727 CCDC144AA2RUR9 1427 aa14.87□□□□□ -0.03
SCN4B-201ENST00000324727 TCERG1O14776 1098 aaKnown RBP14.87□□□□□ -0.03
SCN4B-201ENST00000324727 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
SCN4B-201ENST00000324727 TMEM132EQ6IEE7 984 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 PANK3Q9H999 370 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 CCDC9Q9Y3X0 531 aaKnown RBP14.86□□□□□ -0.03
SCN4B-201ENST00000324727 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
SCN4B-201ENST00000324727 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
SCN4B-201ENST00000324727 TPRNQ4KMQ1 711 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 RRP7AQ9Y3A4 280 aaKnown RBP14.86□□□□□ -0.03
SCN4B-201ENST00000324727 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 GSE1Q14687 1217 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 PKNOX2Q96KN3 472 aa14.86□□□□□ -0.03
SCN4B-201ENST00000324727 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
SCN4B-201ENST00000324727 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
SCN4B-201ENST00000324727 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
SCN4B-201ENST00000324727 ARID3AQ99856 593 aa14.84□□□□□ -0.03
SCN4B-201ENST00000324727 TERF2IPQ9NYB0 399 aa14.82□□□□□ -0.04
SCN4B-201ENST00000324727 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
SCN4B-201ENST00000324727 CLUAP1Q96AJ1 413 aa14.82□□□□□ -0.04
SCN4B-201ENST00000324727 GZF1Q9H116 711 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms