RNA–Protein interactions for RNA: ENST00000323456.9

MTMR4-201, Transcript of myotubularin related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTMR4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-201ENST00000323456 U2SURPO15042 1029 aaKnown RBP13.45□□□□□ -0.26
MTMR4-201ENST00000323456 GGT6Q6P531 493 aa13.45□□□□□ -0.26
MTMR4-201ENST00000323456 PHLDB1Q86UU1 1377 aa13.44□□□□□ -0.26
MTMR4-201ENST00000323456 MAPK8IP3Q9UPT6 1336 aa13.44□□□□□ -0.26
MTMR4-201ENST00000323456 TOP2BQ02880 1626 aa13.44□□□□□ -0.26
MTMR4-201ENST00000323456 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
MTMR4-201ENST00000323456 ANP32BQ92688 251 aaKnown RBP13.43□□□□□ -0.26
MTMR4-201ENST00000323456 NCAPD3P42695 1498 aa13.43□□□□□ -0.26
MTMR4-201ENST00000323456 CUX1P39880 1505 aa13.43□□□□□ -0.26
MTMR4-201ENST00000323456 STK26Q9P289 416 aa13.42□□□□□ -0.26
MTMR4-201ENST00000323456 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
MTMR4-201ENST00000323456 NESP48681 1621 aa13.41□□□□□ -0.26
MTMR4-201ENST00000323456 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■■■■■ 28.2
MTMR4-201ENST00000323456 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
MTMR4-201ENST00000323456 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
MTMR4-201ENST00000323456 JPH4Q96JJ6 628 aa13.4□□□□□ -0.26
MTMR4-201ENST00000323456 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
MTMR4-201ENST00000323456 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
MTMR4-201ENST00000323456 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
MTMR4-201ENST00000323456 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
MTMR4-201ENST00000323456 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
MTMR4-201ENST00000323456 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
MTMR4-201ENST00000323456 BECN1Q14457 450 aa13.37□□□□□ -0.27
MTMR4-201ENST00000323456 A0A0G2JS52 829 aa13.37□□□□□ -0.27
MTMR4-201ENST00000323456 SOX12O15370 315 aa13.37□□□□□ -0.27
MTMR4-201ENST00000323456 NUDCQ9Y266 331 aa13.37□□□□□ -0.27
MTMR4-201ENST00000323456 ZNF644Q9H582 1327 aaPredicted RBP13.36□□□□□ -0.27
MTMR4-201ENST00000323456 CFTRP13569 1480 aa13.35□□□□□ -0.27
MTMR4-201ENST00000323456 EFCAB2Q5VUJ9 269 aa13.35□□□□□ -0.27
MTMR4-201ENST00000323456 KIF3BO15066 747 aa13.35□□□□□ -0.27
MTMR4-201ENST00000323456 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
MTMR4-201ENST00000323456 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
MTMR4-201ENST00000323456 NCOA2Q15596 1464 aa13.34□□□□□ -0.27
MTMR4-201ENST00000323456 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
MTMR4-201ENST00000323456 RALBP1Q15311 655 aa13.34□□□□□ -0.27
MTMR4-201ENST00000323456 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
MTMR4-201ENST00000323456 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
MTMR4-201ENST00000323456 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
MTMR4-201ENST00000323456 TPRNQ4KMQ1 711 aa13.32□□□□□ -0.28
MTMR4-201ENST00000323456 BICRAQ9NZM4 1560 aa13.31□□□□□ -0.28
MTMR4-201ENST00000323456 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
MTMR4-201ENST00000323456 ST20-MTHFSA0A0A6YYL1 179 aa13.3□□□□□ -0.28
MTMR4-201ENST00000323456 LMOD2Q6P5Q4 547 aa13.3□□□□□ -0.28
MTMR4-201ENST00000323456 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
MTMR4-201ENST00000323456 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
MTMR4-201ENST00000323456 CCDC144AA2RUR9 1427 aa13.29□□□□□ -0.28
MTMR4-201ENST00000323456 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
MTMR4-201ENST00000323456 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
MTMR4-201ENST00000323456 USP47Q96K76 1375 aa13.29□□□□□ -0.28
MTMR4-201ENST00000323456 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
MTMR4-201ENST00000323456 PTPRGP23470 1445 aa13.28□□□□□ -0.28
MTMR4-201ENST00000323456 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
MTMR4-201ENST00000323456 PRXQ9BXM0 1461 aa13.27□□□□□ -0.28
MTMR4-201ENST00000323456 TIAM1Q13009 1591 aa13.27□□□□□ -0.28
MTMR4-201ENST00000323456 NCLP19338 710 aaKnown RBP13.26□□□□□ -0.29
MTMR4-201ENST00000323456 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
MTMR4-201ENST00000323456 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
MTMR4-201ENST00000323456 PANK3Q9H999 370 aa13.25□□□□□ -0.29
MTMR4-201ENST00000323456 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
MTMR4-201ENST00000323456 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
MTMR4-201ENST00000323456 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
MTMR4-201ENST00000323456 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
MTMR4-201ENST00000323456 MYBBP1AQ9BQG0 1328 aaKnown RBP13.24□□□□□ -0.29
MTMR4-201ENST00000323456 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
MTMR4-201ENST00000323456 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
MTMR4-201ENST00000323456 PRKRIP1Q9H875 184 aaPredicted RBP13.23□□□□□ -0.29
MTMR4-201ENST00000323456 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
MTMR4-201ENST00000323456 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
MTMR4-201ENST00000323456 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
MTMR4-201ENST00000323456 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
MTMR4-201ENST00000323456 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
MTMR4-201ENST00000323456 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
MTMR4-201ENST00000323456 EHBP1L1Q8N3D4 1523 aa13.22□□□□□ -0.29
MTMR4-201ENST00000323456 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
MTMR4-201ENST00000323456 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.3
MTMR4-201ENST00000323456 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
MTMR4-201ENST00000323456 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
MTMR4-201ENST00000323456 PLIN1O60240 522 aa13.2□□□□□ -0.3
MTMR4-201ENST00000323456 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
MTMR4-201ENST00000323456 ITPRIPQ8IWB1 547 aa13.2□□□□□ -0.3
MTMR4-201ENST00000323456 HSP90AB1P08238 724 aaKnown RBP13.2□□□□□ -0.3
MTMR4-201ENST00000323456 HECW1Q76N89 1606 aa13.19□□□□□ -0.3
MTMR4-201ENST00000323456 NLRP13Q86W25 1043 aa13.19□□□□□ -0.3
MTMR4-201ENST00000323456 MRC2Q9UBG0 1479 aa13.19□□□□□ -0.3
MTMR4-201ENST00000323456 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
MTMR4-201ENST00000323456 APBB1O00213 710 aa13.18□□□□□ -0.3
MTMR4-201ENST00000323456 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
MTMR4-201ENST00000323456 MS4A1P11836 297 aa13.18□□□□□ -0.3
MTMR4-201ENST00000323456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■■■□ 21.8
MTMR4-201ENST00000323456 CCDC7Q96M83 1385 aa13.17□□□□□ -0.3
MTMR4-201ENST00000323456 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
MTMR4-201ENST00000323456 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
MTMR4-201ENST00000323456 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
MTMR4-201ENST00000323456 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
MTMR4-201ENST00000323456 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
MTMR4-201ENST00000323456 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
MTMR4-201ENST00000323456 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
MTMR4-201ENST00000323456 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
MTMR4-201ENST00000323456 WDR97A6NE52 1622 aa13.16□□□□□ -0.3
MTMR4-201ENST00000323456 WASHC2AQ641Q2 1341 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms