RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 ARHGEF12Q9NZN5 1544 aa22.68■■□□□ 1.22
SYCN-201ENST00000318438 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
SYCN-201ENST00000318438 HECW1Q76N89 1606 aa22.67■■□□□ 1.22
SYCN-201ENST00000318438 SAMD9Q5K651 1589 aa22.65■■□□□ 1.22
SYCN-201ENST00000318438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.65■■□□□ 1.22
SYCN-201ENST00000318438 PLEKHD1A6NEE1 506 aa22.64■■□□□ 1.21
SYCN-201ENST00000318438 UHRF1BP1Q6BDS2 1440 aa22.64■■□□□ 1.21
SYCN-201ENST00000318438 PTPRTO14522 1441 aa22.6■■□□□ 1.21
SYCN-201ENST00000318438 ATP10AO60312 1499 aa22.6■■□□□ 1.21
SYCN-201ENST00000318438 SCAPERQ9BY12 1400 aa22.59■■□□□ 1.21
SYCN-201ENST00000318438 LTBP4Q8N2S1 1624 aa22.59■■□□□ 1.21
SYCN-201ENST00000318438 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
SYCN-201ENST00000318438 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
SYCN-201ENST00000318438 IQSEC2Q5JU85 1478 aa22.53■■□□□ 1.2
SYCN-201ENST00000318438 PLCH2O75038 1416 aa22.48■■□□□ 1.19
SYCN-201ENST00000318438 SETD1BQ9UPS6 1966 aaKnown RBP22.45■■□□□ 1.18
SYCN-201ENST00000318438 UBAP1LF5GYI3 381 aa22.44■■□□□ 1.18
SYCN-201ENST00000318438 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
SYCN-201ENST00000318438 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
SYCN-201ENST00000318438 C3P01024 1663 aa22.42■■□□□ 1.18
SYCN-201ENST00000318438 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
SYCN-201ENST00000318438 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
SYCN-201ENST00000318438 AFAP1Q8N556 730 aa22.39■■□□□ 1.17
SYCN-201ENST00000318438 ZNF335Q9H4Z2 1342 aaPredicted RBP22.38■■□□□ 1.17
SYCN-201ENST00000318438 MYT1LQ9UL68 1186 aa22.38■■□□□ 1.17
SYCN-201ENST00000318438 ZNF518AQ6AHZ1 1483 aa22.38■■□□□ 1.17
SYCN-201ENST00000318438 DIP2CQ9Y2E4 1556 aa22.36■■□□□ 1.17
SYCN-201ENST00000318438 KDM5CP41229 1560 aa22.35■■□□□ 1.17
SYCN-201ENST00000318438 ESF1Q9H501 851 aaKnown RBP22.35■■□□□ 1.17
SYCN-201ENST00000318438 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
SYCN-201ENST00000318438 NCKAP5LQ9HCH0 1330 aa22.33■■□□□ 1.17
SYCN-201ENST00000318438 CAMSAP1Q5T5Y3 1602 aa22.33■■□□□ 1.17
SYCN-201ENST00000318438 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
SYCN-201ENST00000318438 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
SYCN-201ENST00000318438 REREQ9P2R6 1566 aa22.31■■□□□ 1.16
SYCN-201ENST00000318438 ABCA6Q8N139 1617 aa22.3■■□□□ 1.16
SYCN-201ENST00000318438 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
SYCN-201ENST00000318438 HSPA1LP34931 641 aa22.27■■□□□ 1.16
SYCN-201ENST00000318438 AGLP35573 1532 aa22.26■■□□□ 1.15
SYCN-201ENST00000318438 KIF14Q15058 1648 aa22.25■■□□□ 1.15
SYCN-201ENST00000318438 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
SYCN-201ENST00000318438 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
SYCN-201ENST00000318438 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
SYCN-201ENST00000318438 MLH3Q9UHC1 1453 aa22.23■■□□□ 1.15
SYCN-201ENST00000318438 NPATQ14207 1427 aa22.22■■□□□ 1.15
SYCN-201ENST00000318438 PIP4K2BP78356 416 aa22.21■■□□□ 1.15
SYCN-201ENST00000318438 ZMYM3Q14202 1370 aa22.16■■□□□ 1.14
SYCN-201ENST00000318438 PKD2Q13563 968 aa22.16■■□□□ 1.14
SYCN-201ENST00000318438 CDK11AQ9UQ88 783 aaPredicted RBP22.16■■□□□ 1.14
SYCN-201ENST00000318438 PLA2R1Q13018 1463 aa22.15■■□□□ 1.14
SYCN-201ENST00000318438 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
SYCN-201ENST00000318438 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
SYCN-201ENST00000318438 TROQ12816 1431 aaPredicted RBP22.14■■□□□ 1.14
SYCN-201ENST00000318438 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
SYCN-201ENST00000318438 MROH2AA6NES4 1674 aa22.12■■□□□ 1.13
SYCN-201ENST00000318438 ABCC1P33527 1531 aa22.11■■□□□ 1.13
SYCN-201ENST00000318438 MYO3AQ8NEV4 1616 aa22.11■■□□□ 1.13
SYCN-201ENST00000318438 KIDINS220Q9ULH0 1771 aa22.1■■□□□ 1.13
SYCN-201ENST00000318438 CDC42BPBQ9Y5S2 1711 aa22.1■■□□□ 1.13
SYCN-201ENST00000318438 ZNF142P52746 1687 aaPredicted RBP22.1■■□□□ 1.13
SYCN-201ENST00000318438 CEP170BQ9Y4F5 1589 aaPredicted RBP22.09■■□□□ 1.13
SYCN-201ENST00000318438 CLIP1P30622 1438 aa22.09■■□□□ 1.13
SYCN-201ENST00000318438 TOM1O60784 492 aa22.09■■□□□ 1.13
SYCN-201ENST00000318438 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
SYCN-201ENST00000318438 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
SYCN-201ENST00000318438 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
SYCN-201ENST00000318438 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
SYCN-201ENST00000318438 CLTCQ00610 1675 aaKnown RBP22.04■■□□□ 1.12
SYCN-201ENST00000318438 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
SYCN-201ENST00000318438 EEA1Q15075 1411 aa22.02■■□□□ 1.12
SYCN-201ENST00000318438 CPS1P31327 1500 aa22.01■■□□□ 1.11
SYCN-201ENST00000318438 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
SYCN-201ENST00000318438 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
SYCN-201ENST00000318438 SHANK2Q9UPX8 1470 aa21.99■■□□□ 1.11
SYCN-201ENST00000318438 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
SYCN-201ENST00000318438 ALKQ9UM73 1620 aa21.96■■□□□ 1.11
SYCN-201ENST00000318438 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
SYCN-201ENST00000318438 LRRIQ1Q96JM4 1722 aa21.96■■□□□ 1.11
SYCN-201ENST00000318438 A2ML1A8K2U0 1454 aa21.96■■□□□ 1.11
SYCN-201ENST00000318438 GGT6Q6P531 493 aa21.95■■□□□ 1.1
SYCN-201ENST00000318438 SPAG9O60271 1321 aaKnown RBP21.95■■□□□ 1.1
SYCN-201ENST00000318438 DNMT1P26358 1616 aaKnown RBP21.95■■□□□ 1.1
SYCN-201ENST00000318438 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
SYCN-201ENST00000318438 NEURL4Q96JN8 1562 aa21.94■■□□□ 1.1
SYCN-201ENST00000318438 PLXNC1O60486 1568 aa21.92■■□□□ 1.1
SYCN-201ENST00000318438 SYCP2Q9BX26 1530 aa21.91■■□□□ 1.1
SYCN-201ENST00000318438 RGS17Q9UGC6 210 aaPredicted RBP21.91■■□□□ 1.1
SYCN-201ENST00000318438 A2MP01023 1474 aa21.9■■□□□ 1.1
SYCN-201ENST00000318438 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
SYCN-201ENST00000318438 VWDEQ8N2E2 1590 aa21.89■■□□□ 1.09
SYCN-201ENST00000318438 ATP7AQ04656 1500 aa21.89■■□□□ 1.09
SYCN-201ENST00000318438 POLR1AO95602 1720 aaPredicted RBP21.89■■□□□ 1.09
SYCN-201ENST00000318438 CDC42BPAQ5VT25 1732 aa21.89■■□□□ 1.09
SYCN-201ENST00000318438 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
SYCN-201ENST00000318438 INO80Q9ULG1 1556 aaPredicted RBP21.84■■□□□ 1.09
SYCN-201ENST00000318438 FBXO31Q5XUX0 539 aaPredicted RBP21.83■■□□□ 1.09
SYCN-201ENST00000318438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.83■■□□□ 1.08
SYCN-201ENST00000318438 TNRQ92752 1358 aa21.82■■□□□ 1.08
SYCN-201ENST00000318438 ANKLE2Q86XL3 938 aa21.81■■□□□ 1.08
SYCN-201ENST00000318438 CCDC18Q5T9S5 1454 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms