RNA–Protein interactions for RNA: ENST00000317376.8

SPOCK2-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,328 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-201ENST00000317376 CUX1P39880 1505 aa17.61■□□□□ 0.41
SPOCK2-201ENST00000317376 CFTRP13569 1480 aa17.61■□□□□ 0.41
SPOCK2-201ENST00000317376 NUP155O75694 1391 aa17.61■□□□□ 0.41
SPOCK2-201ENST00000317376 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
SPOCK2-201ENST00000317376 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
SPOCK2-201ENST00000317376 RRBP1Q9P2E9 1410 aaKnown RBP17.6■□□□□ 0.41
SPOCK2-201ENST00000317376 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
SPOCK2-201ENST00000317376 KTN1Q86UP2 1357 aaKnown RBP17.59■□□□□ 0.41
SPOCK2-201ENST00000317376 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
SPOCK2-201ENST00000317376 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
SPOCK2-201ENST00000317376 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
SPOCK2-201ENST00000317376 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.4
SPOCK2-201ENST00000317376 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SPOCK2-201ENST00000317376 FGD6Q6ZV73 1430 aa17.57■□□□□ 0.4
SPOCK2-201ENST00000317376 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
SPOCK2-201ENST00000317376 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
SPOCK2-201ENST00000317376 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
SPOCK2-201ENST00000317376 BECN1Q14457 450 aa17.57■□□□□ 0.4
SPOCK2-201ENST00000317376 CASKIN1Q8WXD9 1431 aa17.56■□□□□ 0.4
SPOCK2-201ENST00000317376 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
SPOCK2-201ENST00000317376 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
SPOCK2-201ENST00000317376 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
SPOCK2-201ENST00000317376 GGT6Q6P531 493 aa17.53■□□□□ 0.4
SPOCK2-201ENST00000317376 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
SPOCK2-201ENST00000317376 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
SPOCK2-201ENST00000317376 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.4
SPOCK2-201ENST00000317376 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.4
SPOCK2-201ENST00000317376 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
SPOCK2-201ENST00000317376 EID1Q9Y6B2 187 aa17.52■□□□□ 0.39
SPOCK2-201ENST00000317376 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
SPOCK2-201ENST00000317376 UACAQ9BZF9 1416 aa17.5■□□□□ 0.39
SPOCK2-201ENST00000317376 POGKQ9P215 609 aa17.49■□□□□ 0.39
SPOCK2-201ENST00000317376 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
SPOCK2-201ENST00000317376 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
SPOCK2-201ENST00000317376 EFCAB2Q5VUJ9 269 aa17.47■□□□□ 0.39
SPOCK2-201ENST00000317376 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.39
SPOCK2-201ENST00000317376 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
SPOCK2-201ENST00000317376 FTSJ3Q8IY81 847 aaKnown RBP17.45■□□□□ 0.38
SPOCK2-201ENST00000317376 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
SPOCK2-201ENST00000317376 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
SPOCK2-201ENST00000317376 TNNT2P45379 298 aaPredicted RBP17.44■□□□□ 0.38
SPOCK2-201ENST00000317376 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
SPOCK2-201ENST00000317376 MS4A1P11836 297 aa17.43■□□□□ 0.38
SPOCK2-201ENST00000317376 KIF15Q9NS87 1388 aa17.42■□□□□ 0.38
SPOCK2-201ENST00000317376 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
SPOCK2-201ENST00000317376 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
SPOCK2-201ENST00000317376 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
SPOCK2-201ENST00000317376 EIF3AQ14152 1382 aaKnown RBP17.41■□□□□ 0.38
SPOCK2-201ENST00000317376 TMX4Q9H1E5 349 aaPredicted RBP17.41■□□□□ 0.38
SPOCK2-201ENST00000317376 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
SPOCK2-201ENST00000317376 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
SPOCK2-201ENST00000317376 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.38
SPOCK2-201ENST00000317376 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
SPOCK2-201ENST00000317376 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
SPOCK2-201ENST00000317376 RGS3P49796 1198 aa17.39■□□□□ 0.37
SPOCK2-201ENST00000317376 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
SPOCK2-201ENST00000317376 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
SPOCK2-201ENST00000317376 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
SPOCK2-201ENST00000317376 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
SPOCK2-201ENST00000317376 PDE3BQ13370 1112 aa17.38■□□□□ 0.37
SPOCK2-201ENST00000317376 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
SPOCK2-201ENST00000317376 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
SPOCK2-201ENST00000317376 CCDC144AA2RUR9 1427 aa17.36■□□□□ 0.37
SPOCK2-201ENST00000317376 USP47Q96K76 1375 aa17.36■□□□□ 0.37
SPOCK2-201ENST00000317376 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
SPOCK2-201ENST00000317376 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
SPOCK2-201ENST00000317376 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
SPOCK2-201ENST00000317376 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
SPOCK2-201ENST00000317376 TOPBP1Q92547 1522 aa17.33■□□□□ 0.36
SPOCK2-201ENST00000317376 MSH5O43196 834 aa17.32■□□□□ 0.36
SPOCK2-201ENST00000317376 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 PTPRGP23470 1445 aa17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 CNTLNQ9NXG0 1405 aa17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
SPOCK2-201ENST00000317376 CCDC7Q96M83 1385 aa17.3■□□□□ 0.36
SPOCK2-201ENST00000317376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPOCK2-201ENST00000317376 POLA1P09884 1462 aaPredicted RBP17.3■□□□□ 0.36
SPOCK2-201ENST00000317376 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
SPOCK2-201ENST00000317376 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
SPOCK2-201ENST00000317376 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
SPOCK2-201ENST00000317376 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
SPOCK2-201ENST00000317376 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
SPOCK2-201ENST00000317376 CC2D2AQ9P2K1 1620 aa17.28■□□□□ 0.36
SPOCK2-201ENST00000317376 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
SPOCK2-201ENST00000317376 HFM1A2PYH4 1435 aa17.27■□□□□ 0.36
SPOCK2-201ENST00000317376 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
SPOCK2-201ENST00000317376 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPOCK2-201ENST00000317376 TPRNQ4KMQ1 711 aa17.26■□□□□ 0.35
SPOCK2-201ENST00000317376 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
SPOCK2-201ENST00000317376 KIF3BO15066 747 aa17.26■□□□□ 0.35
SPOCK2-201ENST00000317376 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
SPOCK2-201ENST00000317376 SOX12O15370 315 aa17.25■□□□□ 0.35
SPOCK2-201ENST00000317376 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
SPOCK2-201ENST00000317376 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
SPOCK2-201ENST00000317376 NESP48681 1621 aa17.23■□□□□ 0.35
SPOCK2-201ENST00000317376 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
SPOCK2-201ENST00000317376 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms