RNA–Protein interactions for RNA: ENST00000317296.9

STAG3-201, Transcript of stromal antigen 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STAG3, Length 4,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-201ENST00000317296 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
STAG3-201ENST00000317296 FOXD1Q16676 465 aa13.55□□□□□ -0.24
STAG3-201ENST00000317296 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
STAG3-201ENST00000317296 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
STAG3-201ENST00000317296 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
STAG3-201ENST00000317296 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
STAG3-201ENST00000317296 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
STAG3-201ENST00000317296 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
STAG3-201ENST00000317296 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
STAG3-201ENST00000317296 CCDC18Q5T9S5 1454 aa13.54□□□□□ -0.24
STAG3-201ENST00000317296 ARXQ96QS3 562 aa13.52□□□□□ -0.24
STAG3-201ENST00000317296 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
STAG3-201ENST00000317296 KNSTRNQ9Y448 316 aa13.5□□□□□ -0.25
STAG3-201ENST00000317296 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
STAG3-201ENST00000317296 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
STAG3-201ENST00000317296 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
STAG3-201ENST00000317296 CUX1P39880 1505 aa13.48□□□□□ -0.25
STAG3-201ENST00000317296 TNNT2P45379 298 aaPredicted RBP13.48□□□□□ -0.25
STAG3-201ENST00000317296 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
STAG3-201ENST00000317296 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
STAG3-201ENST00000317296 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
STAG3-201ENST00000317296 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
STAG3-201ENST00000317296 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.26
STAG3-201ENST00000317296 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
STAG3-201ENST00000317296 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
STAG3-201ENST00000317296 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
STAG3-201ENST00000317296 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
STAG3-201ENST00000317296 CCDC9Q9Y3X0 531 aaKnown RBP13.44□□□□□ -0.26
STAG3-201ENST00000317296 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
STAG3-201ENST00000317296 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
STAG3-201ENST00000317296 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
STAG3-201ENST00000317296 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
STAG3-201ENST00000317296 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
STAG3-201ENST00000317296 TMF1P82094 1093 aa13.39□□□□□ -0.27
STAG3-201ENST00000317296 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
STAG3-201ENST00000317296 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
STAG3-201ENST00000317296 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
STAG3-201ENST00000317296 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
STAG3-201ENST00000317296 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
STAG3-201ENST00000317296 FANCIQ9NVI1 1328 aa13.37□□□□□ -0.27
STAG3-201ENST00000317296 GLIPR1L2Q4G1C9 344 aa13.37□□□□□ -0.27
STAG3-201ENST00000317296 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
STAG3-201ENST00000317296 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
STAG3-201ENST00000317296 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
STAG3-201ENST00000317296 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
STAG3-201ENST00000317296 NPHP1O15259 732 aa13.36□□□□□ -0.27
STAG3-201ENST00000317296 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
STAG3-201ENST00000317296 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
STAG3-201ENST00000317296 HDGFL2Q7Z4V5 671 aaPredicted RBP13.34□□□□□ -0.27
STAG3-201ENST00000317296 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
STAG3-201ENST00000317296 TRAK1Q9UPV9 953 aa13.33□□□□□ -0.27
STAG3-201ENST00000317296 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
STAG3-201ENST00000317296 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
STAG3-201ENST00000317296 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
STAG3-201ENST00000317296 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
STAG3-201ENST00000317296 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
STAG3-201ENST00000317296 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
STAG3-201ENST00000317296 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
STAG3-201ENST00000317296 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
STAG3-201ENST00000317296 MSH5O43196 834 aa13.29□□□□□ -0.28
STAG3-201ENST00000317296 PRDM2Q13029 1718 aa13.29□□□□□ -0.28
STAG3-201ENST00000317296 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
STAG3-201ENST00000317296 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
STAG3-201ENST00000317296 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
STAG3-201ENST00000317296 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
STAG3-201ENST00000317296 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
STAG3-201ENST00000317296 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
STAG3-201ENST00000317296 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
STAG3-201ENST00000317296 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
STAG3-201ENST00000317296 ATF3P18847 181 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
STAG3-201ENST00000317296 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
STAG3-201ENST00000317296 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
STAG3-201ENST00000317296 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
STAG3-201ENST00000317296 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
STAG3-201ENST00000317296 THEMISQ8N1K5 641 aaPredicted RBP13.21□□□□□ -0.3
STAG3-201ENST00000317296 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.3
STAG3-201ENST00000317296 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.3
STAG3-201ENST00000317296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.21□□□□□ -0.3
STAG3-201ENST00000317296 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
STAG3-201ENST00000317296 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
STAG3-201ENST00000317296 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
STAG3-201ENST00000317296 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 AMPHP49418 695 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
STAG3-201ENST00000317296 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
STAG3-201ENST00000317296 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
STAG3-201ENST00000317296 HSPA5P11021 654 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms